prot_H-elongata_contig16605.4158.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16605.4158.1
Unique Nameprot_H-elongata_contig16605.4158.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length297
Homology
BLAST of mRNA_H-elongata_contig16605.4158.1 vs. uniprot
Match: D7FLU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLU1_ECTSI)

HSP 1 Score: 333 bits (855), Expect = 1.280e-109
Identity = 181/300 (60.33%), Postives = 228/300 (76.00%), Query Frame = 0
Query:    1 MDLSEVTLLVQEVLERVSETERELRGFRKESSLAKI-RSSVRERKFVIDTRAKMFGAAFAGCVAGMVVGWSVLPNLWLFGGVTGAVSCATLSRTR-GTVGSLCATCGIQVALVYKDIRDWWEQTVFLYKTGKLSYTYWKGFEKYDKAWGLTDKYNGVVGKISKEAVDLDRQYKIRAKAVRQDNAISAGKRVTMFSRKAGSSAAKEMTQLASVATDWGATQLGRWGLMNKSEGGVVAKGRGLR-LPWKWSRDGNALKRPLGLSFDLGGLFGGKKHSLYSAPASGGTRKPGYRGEPVIPVSI 297
            M+L+E++ ++  VLER+SETEREL+  +KE SLAK  RS VR+RKF+IDTRAKM GAAFAG VAGM+VGWSVLPNLWL GGVTGA++ A LSR+  GTVG++C+TCGIQVAL+YKD+RDWWEQTVFLYKTGKLSYTYW+GFE+YD+AWGL+ KY   V K+SKEA++LDRQYKIR K +R      AGKR+T  SR+ GSSA +E+T LA  A+DWG  +L +WGLM         + +    L  K S+ G A KRPLG+S  L G+FG +  S+YSAP +GGTR   ++ +P+IP  I
Sbjct:  112 MELAEMSEMMSLVLERLSETERELKRIQKEGSLAKTNRSEVRDRKFIIDTRAKMLGAAFAGSVAGMIVGWSVLPNLWLVGGVTGALAFAALSRSSTGTVGTICSTCGIQVALMYKDVRDWWEQTVFLYKTGKLSYTYWRGFERYDQAWGLSAKYTETVAKVSKEALELDRQYKIRQKTLR------AGKRLTRISRQVGSSAKREVTTLAGSASDWGGNKLRKWGLMGDDLDPRRKRTKLTEILKLKKSKVGGA-KRPLGVSVVLDGMFGERSRSMYSAPPAGGTRIKTHKADPIIPARI 404          
BLAST of mRNA_H-elongata_contig16605.4158.1 vs. uniprot
Match: A0A6H5KZI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZI1_9PHAE)

HSP 1 Score: 333 bits (853), Expect = 1.650e-107
Identity = 177/299 (59.20%), Postives = 222/299 (74.25%), Query Frame = 0
Query:    1 MDLSEVTLLVQEVLERVSETERELRGFRKESSLAKI-RSSVRERKFVIDTRAKMFGAAFAGCVAGMVVGWSVLPNLWLFGGVTGAVSCATLSRTR-GTVGSLCATCGIQVALVYKDIRDWWEQTVFLYKTGKLSYTYWKGFEKYDKAWGLTDKYNGVVGKISKEAVDLDRQYKIRAKAVRQDNAISAGKRVTMFSRKAGSSAAKEMTQLASVATDWGATQLGRWGLMNKSEGGVVAKGRGLRLPWKWSRDGNALKRPLGLSFDLGGLFGGKKHSLYSAPASGGTRKPGYRGEPVIPVSI 297
            M+L+E++ ++  VLER+SETEREL+  +KE SLAK  RS VR+RKF+IDTRAKM GAAFAG VAGM+VGWSVLPNLWL GGVTGA++ A LSR+  GTVG++C+TCGIQVAL+YKD+RDWWEQTVFLYKTGKLSYTYW+ FE+YD+AWGL+ KY   V K+SKEA++LDRQYKIR K +R      AGKR+T  SR+ GSSA +E+T LA   +DWG  +L +WGLM         + +   L     R     KRPLG+S  L G+FG +  S+YSAP +GGTR   Y+ +P+IP  I
Sbjct:  253 MELAEMSEMMSLVLERLSETERELKRIQKEGSLAKTNRSEVRDRKFIIDTRAKMLGAAFAGSVAGMIVGWSVLPNLWLVGGVTGALAFAALSRSSTGTVGTICSTCGIQVALMYKDVRDWWEQTVFLYKTGKLSYTYWRVFERYDQAWGLSAKYTETVAKVSKEALELDRQYKIRQKTLR------AGKRITRISRQVGSSAKQEVTTLAGTVSDWGGNKLRKWGLMGDDLDPRRKRNKLTELLKLKKRGDGGAKRPLGVSVVLDGMFGERSRSMYSAPPAGGTRIKTYKADPLIPARI 545          
BLAST of mRNA_H-elongata_contig16605.4158.1 vs. uniprot
Match: A0A836CAQ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAQ6_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 5.530e-21
Identity = 45/71 (63.38%), Postives = 60/71 (84.51%), Query Frame = 0
Query:  107 QVALVYKDIRDWWEQTVFLYKTGKLSYTYWKGFEKYDKAWGLTDKYNGVVGKISKEAVDLDRQYKIRAKAV 177
            +VALVYKDI+D+++QTVFLYKTGKLSY YW  ++ YD+ + LT KYNG + ++SKEA ++DRQYKIR KA+
Sbjct:  149 KVALVYKDIKDFYDQTVFLYKTGKLSYQYWSMWDDYDRRFQLTAKYNGFMARVSKEAYEIDRQYKIRNKAL 219          
BLAST of mRNA_H-elongata_contig16605.4158.1 vs. uniprot
Match: A0A7S3YL52_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YL52_HETAK)

HSP 1 Score: 90.9 bits (224), Expect = 5.650e-18
Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 0
Query:   49 TRAKMFGAAFAGC-VAGMVVGWSVLPNLWLFGGVTGAVSCATLSRTRGTVGSLCATCGIQVALVYKDIRDWWEQTVFLYKTGKLSYTYWKGFEKYDKAWGLTDKYNGVVGKISKEAVDLDRQYKIRAKA 176
            T  K+   + A C + GM++G SV  NLWL G   GA      ++  G +G      G+ VAL Y D+  +++ TV+LYKTG L  TY+K FE+ DK + + DKY   V +I  E   +DR++ I  K+
Sbjct:   43 TPEKIQNGSVAACTLIGMIIGKSVSSNLWLVGAAAGAYFGTITAKQSGLIGVRVRKLGVWVALRYIDVAKFYQDTVYLYKTGVLGATYYKKFEELDKQYKIVDKYESAVARIQGEYAKVDREFDITEKS 171          
BLAST of mRNA_H-elongata_contig16605.4158.1 vs. uniprot
Match: A0A7S4A9H9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A9H9_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 5.000e-14
Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 0
Query:   55 GAAFAGCVAGMVVGWSVLPNLWLFGGVTGAVSCATLSRTRGT----------VGSLCATCGIQVALVYKDIRDWWEQTVFLYKTGKLSYTYWKGFEKYDKAWGLTDK 151
            G + AGC  GMV+G ++LPNLWL GG+ G+     +++   T          VG    +CG Q+A  Y  + D+W+   FLYKTG+LSY Y+K +E  DK + +  K
Sbjct:  250 GTSVAGCFLGMVIGITILPNLWLVGGILGSFYGYEITKIVSTEDNNLKDSNIVGKFLISCGRQLARAYLQLVDYWKGLWFLYKTGQLSYEYYKTYENLDKKFAVQSK 356          
BLAST of mRNA_H-elongata_contig16605.4158.1 vs. uniprot
Match: A0A1Z5JZL2_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZL2_FISSO)

HSP 1 Score: 66.6 bits (161), Expect = 1.300e-8
Identity = 37/124 (29.84%), Postives = 63/124 (50.81%), Query Frame = 0
Query:   47 IDTRAKMFGAAFAGCVAGMVVGWSVLPNLWLFGGVTGAVSCATLSRTR--GTVGSLCATCGIQVALVYKDIRDWWEQTVFLYKTGKLSYTYWKGFEKYDKAWGLTDKYNGVVGKISKEAVDLDR 168
            +D  A   G + AG + GM++G S+LPNLWLFG + GAV    ++          +    G ++A     + D      F+YKTG+LSY Y++ +   D+ + + DK +    + ++  V  D+
Sbjct:  303 LDLNALKKGNSVAGLLLGMILGISILPNLWLFGSIVGAVYGYNITPLDELNVASRIVTQLGRKIARASLSVYDSANTLFFMYKTGQLSYEYYQRYAALDQKFAIQDKIDAFNARFAEGKVKFDK 426          
BLAST of mRNA_H-elongata_contig16605.4158.1 vs. uniprot
Match: A0A1Z5JR06_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JR06_FISSO)

HSP 1 Score: 61.6 bits (148), Expect = 5.480e-7
Identity = 34/116 (29.31%), Postives = 62/116 (53.45%), Query Frame = 0
Query:   55 GAAFAGCVAGMVVGWSVLPNLWLFGGVTGAVSCATLSRT-RGTVGS-LCATCGIQVALVYKDIRDWWEQTVFLYKTGKLSYTYWKGFEKYDKAWGLTDKYNGVVGKISKEAVDLDR 168
            G   AG + GM++  S+LPNLWLFG + GA+    ++   +  + S + +  G ++A     + D      F+YKTG+LSY Y++ +   D+ + + DK +    + ++  V  D+
Sbjct:  231 GNLVAGLLLGMILAMSILPNLWLFGSIVGAIYGYNITPLDQDNIASRVVSHLGRRIARASLSVYDSANTLFFMYKTGQLSYKYYQRYAALDQRFAIQDKIDAFNARFAEGKVKFDK 346          
BLAST of mRNA_H-elongata_contig16605.4158.1 vs. uniprot
Match: A0A1E7FW04_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FW04_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 5.620e-7
Identity = 38/139 (27.34%), Postives = 67/139 (48.20%), Query Frame = 0
Query:   55 GAAFAGCVAGMVVGWSVLPNLWLFGGVTGAVSCATLSRTR---------------GTVGSLCATCGIQVALVYKDIRDWWEQTVFLYKTGKLSYTYWKGFEKYDKAWGLTDK---YNGVVGKISKEAVDLDRQYKIRAK 175
            G   AG  +G ++G ++LPNLWL G  +GA+    +++                   +       G Q+A +Y    D+ +   FLYKTG+LSY Y+K +E  D  + + +K   +N V G+  ++  D ++  ++  K
Sbjct:  235 GTTIAGSFSGFILGATILPNLWLVGFFSGAIYGYEITKENPLSITQQGQIHTIEPNIIARFLIAFGKQLAKIYLQFADYGKAMWFLYKTGQLSYEYYKTYETLDNKFAIQNKVDAWNRVFGEGKQKFDDWEKNNEVGRK 373          
BLAST of mRNA_H-elongata_contig16605.4158.1 vs. uniprot
Match: A0A7S0Y8S1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y8S1_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 9.720e-6
Identity = 40/121 (33.06%), Postives = 59/121 (48.76%), Query Frame = 0
Query:   57 AFAGCVAGMVVGWSVLPNLWLFGGVTGAVSCATLSRT---------RGTVGSLCATCGIQVALVYKDIRDWWEQTVFLYKTGKLSYTYWKGFEKYDKAWGL---TDKYNGVVGKISKEAVD 165
            A   C  GM++G ++LPNLWL   V G +    +++           G    L +T   ++A  Y+   D  +   FLYKTG+LSY Y+K +E  DK + +    D +N V  K  KE  D
Sbjct:  191 AIISCFVGMIIGITILPNLWLVSMVAGVLYGYEITKDIAEYDPGEKNGLANFLIST-ATRLAKAYRKTADGLKALWFLYKTGQLSYEYYKTYETMDKKFAIQKKVDAWNRVFVK-GKEKFD 309          
BLAST of mRNA_H-elongata_contig16605.4158.1 vs. uniprot
Match: A0A7S4R6K7_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R6K7_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 8.390e-5
Identity = 36/134 (26.87%), Postives = 60/134 (44.78%), Query Frame = 0
Query:   55 GAAFAGCVAGMVVGWSVLPNLWLFGGVTGAVSCATLS--------------------RTRGTVGSLCATCGIQVALVYKDIRDWWEQTVFLYKTGKLSYTYWKGFEKYDKAWGLTDKYNGVVGKISKEAVDLDR 168
            G   +  + G VVG S+ PNLWL G + GA+    LS                    R +  V       G ++A  Y ++ D+++   F+YKTG+LSY Y+K +   D  + + DK +    +  +   + D+
Sbjct:  398 GTITSAAILGSVVGVSLAPNLWLIGFICGALYGQELSKEYSADDXXXXXXXXDGATARQKSIVAKALFKSGRKLANFYLNLYDFFQYQWFIYKTGQLSYDYYKKYAVLDSKFQIQDKIDAWNARFQEGKKNFDK 531          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16605.4158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FLU1_ECTSI1.280e-10960.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZI1_9PHAE1.650e-10759.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CAQ6_9STRA5.530e-2163.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3YL52_HETAK5.650e-1837.98Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4A9H9_9STRA5.000e-1439.25Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1Z5JZL2_FISSO1.300e-829.84Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A1Z5JR06_FISSO5.480e-729.31Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A1E7FW04_9STRA5.620e-727.34Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S0Y8S1_9STRA9.720e-633.06Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A7S4R6K7_9STRA8.390e-526.87Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..72
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 73..297
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..52
NoneNo IPR availableTMHMMTMhelixcoord: 54..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16605contigH-elongata_contig16605:595..7416 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16605.4158.1mRNA_H-elongata_contig16605.4158.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16605 577..7416 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16605.4158.1 ID=prot_H-elongata_contig16605.4158.1|Name=mRNA_H-elongata_contig16605.4158.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=297bp
MDLSEVTLLVQEVLERVSETERELRGFRKESSLAKIRSSVRERKFVIDTR
AKMFGAAFAGCVAGMVVGWSVLPNLWLFGGVTGAVSCATLSRTRGTVGSL
CATCGIQVALVYKDIRDWWEQTVFLYKTGKLSYTYWKGFEKYDKAWGLTD
KYNGVVGKISKEAVDLDRQYKIRAKAVRQDNAISAGKRVTMFSRKAGSSA
AKEMTQLASVATDWGATQLGRWGLMNKSEGGVVAKGRGLRLPWKWSRDGN
ALKRPLGLSFDLGGLFGGKKHSLYSAPASGGTRKPGYRGEPVIPVSI
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