prot_H-elongata_contig165824.4147.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig165824.4147.1
Unique Nameprot_H-elongata_contig165824.4147.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length222
Homology
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BLAST of mRNA_H-elongata_contig165824.4147.1 vs. uniprot
Match: A0A6H5LC46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC46_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 1.510e-44
Identity = 109/239 (45.61%), Postives = 127/239 (53.14%), Query Frame = 0 
Query:    1 VLPQVRSRVDGDEARLLSGEFPFRQTWAGPAGGHPTEERGKYTDRGGGCVI--------GRRDHGDPRTRCKVALDVTVEHGGGDDGKNCDARSAATFRGIENGDR----TSGTAGLVLLPCFVHGVVNVSIHAFDSAFDSTGGRAAIGAERDGGL-------FARLRVLEGTRVDALFKQDTRRALDVCGGSQLRIYDPCCVFPGEAEGGRGGRA--LLMCTQLCEPFPACFPPLADP 218
            +L QVR+R DGDEARLLSGEFPFRQ    P+    +   G       G  +         RRD+GDPRTRC VALD TV         +        + G E  +       G +GLV   CFVH VV+VS+    +     G R A  A  D          F  L  LEG RVD LFKQDTRRA+DV  GSQLRIYDP CV+     GG GGRA  LL+CTQLCEP+P+C P L  P
Sbjct:  390 LLQQVRARCDGDEARLLSGEFPFRQ----PSSASKSTTGGNNNSHLDGVGVXXXXSGAKSRRDYGDPRTRCSVALDATVMLPAATPRGSSVGFEGGLWGGGEGNELGQAGRGGASGLVWFSCFVHHVVDVSLGLGGNRV-RPGSRCATSAAGDAAGWSSVATDFGCLHRLEGVRVDGLFKQDTRRAVDVGPGSQLRIYDPSCVWYDAEVGGEGGRAEALLVCTQLCEPYPSCLPALPSP 623
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BLAST of mRNA_H-elongata_contig165824.4147.1 vs. uniprot
Match: D7FXF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF5_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 6.730e-33
Identity = 103/219 (47.03%), Postives = 116/219 (52.97%), Query Frame = 0 
Query:    1 VLPQVRSRVDGDEARLLSGEFPFRQ-TWAGPAGGHPTEERGKYTDRGGGCVI----GRRDHGDPRTRCKVALDVTVEHGGGDDGKNCDARSAATFRGIENGDRTS----------------GTAGLVLLPCFVHGVVNVSIHAFDSAFDSTGGR---AAIG-AERDGGL---FARLRVLEGTRVDALFKQDTRRALDVCGGSQLRIYDPCCVFPGEAEG 191
            +L QVR+R DGDEARLLSGEFPFRQ + A  A        G   D G G        RRD GDPRTRC+VALD TV               AAT RG   G                    G  GLV   CFVH VV+VS+    S   S G R   +A+G A    G+   F RL  LEG RVD +FKQDTRRA+DV  GSQLRIYDPCCV+  +AEG
Sbjct: 1025 LLQQVRARCDGDEARLLSGEFPFRQPSSASKATTSXXXXXGHLDDVGVGXXXXGGKSRRDPGDPRTRCRVALDATV------------MLPAATPRGPSVGFEGGLWGGGEGNELGQAGGGGVTGLVRFSCFVHHVVDVSLSLGGSRV-SPGSRRVTSAVGYAAGPSGVATDFGRLHRLEGVRVDGIFKQDTRRAVDVGPGSQLRIYDPCCVWY-DAEG 1229
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig165824.4147.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LC46_9PHAE1.510e-4445.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXF5_ECTSI6.730e-3347.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig165824contigH-elongata_contig165824:636..1301 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig165824.4147.1mRNA_H-elongata_contig165824.4147.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig165824 636..1301 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig165824.4147.1 ID=prot_H-elongata_contig165824.4147.1|Name=mRNA_H-elongata_contig165824.4147.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=222bp
VLPQVRSRVDGDEARLLSGEFPFRQTWAGPAGGHPTEERGKYTDRGGGCV
IGRRDHGDPRTRCKVALDVTVEHGGGDDGKNCDARSAATFRGIENGDRTS
GTAGLVLLPCFVHGVVNVSIHAFDSAFDSTGGRAAIGAERDGGLFARLRV
LEGTRVDALFKQDTRRALDVCGGSQLRIYDPCCVFPGEAEGGRGGRALLM
CTQLCEPFPACFPPLADPPDA*
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