prot_H-elongata_contig165671.4137.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig165671.4137.1
Unique Name	prot_H-elongata_contig165671.4137.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	107

Homology

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BLAST of mRNA_H-elongata_contig165671.4137.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 2.450e-41
Identity = 77/106 (72.64%), Postives = 84/106 (79.25%), Query Frame = 0

Query:    2 WWKRWESSYPLLARAARVVFGAPASSAVLERDFRDTGRMMTSSRSSTDAKYVDMILFLHGNLDLIPEDIAELPADGVNGAQSKIPERLSNTLPELQGLAGAFGPVD 107
            WWKR E SYPLLAR ARVVF APAS  V ERD    GRMMTSSRS+ DAKYV+M+LFLHGN+DL+PE I ELPADGVNG Q+KIP RLSN + EL  L G FGPVD
Sbjct:  652 WWKRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDAKYVEMVLFLHGNVDLLPEIIPELPADGVNGVQTKIPGRLSNPMLELHALDGEFGPVD 757

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BLAST of mRNA_H-elongata_contig165671.4137.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 1.680e-37
Identity = 74/106 (69.81%), Postives = 82/106 (77.36%), Query Frame = 0

Query:    2 WWKRWESSYPLLARAARVVFGAPASSAVLERDFRDTGRMMTSSRSSTDAKYVDMILFLHGNLDLIPEDIAELPADGVNGAQSKIPERLSNTLPELQGLAGAFGPVD 107
            WWK+W   YPLLARAARVVFGAPAS+AVLERDF D   MM SSRS+ DAKYV+M+LFLHGNLDLIPE I EL  + V   Q+KIP RLSN +PEL GL G  G VD
Sbjct:  550 WWKKWGRLYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDEDV---QAKIPGRLSNPIPELHGLDGTLGLVD 652

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BLAST of mRNA_H-elongata_contig165671.4137.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 1.010e-36
Identity = 70/106 (66.04%), Postives = 83/106 (78.30%), Query Frame = 0

Query:    2 WWKRWESSYPLLARAARVVFGAPASSAVLERDFRDTGRMMTSSRSSTDAKYVDMILFLHGNLDLIPEDIAELPADGVNGAQSKIPERLSNTLPELQGLAGAFGPVD 107
            WWK W  +YPLLAR ARVVFGAPAS+AVLERDF + GRMMTSSRS+ D+KYV+MI+FLHGNLDLIPEDI +L       A++KIP RL+N +  L+ L G F PVD
Sbjct:  610 WWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAA---ARTKIPGRLANPVERLEQLDGVFAPVD 712

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BLAST of mRNA_H-elongata_contig165671.4137.1 vs. uniprot
Match: A0A6H5L5L6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 9.270e-36
Identity = 70/94 (74.47%), Postives = 75/94 (79.79%), Query Frame = 0

Query:    2 WWKRWESSYPLLARAARVVFGAPASSAVLERDFRDTGRMMTSSRSSTDAKYVDMILFLHGNLDLIPEDIAELPADGVNGAQSKIPE-RLSNTLP 94
            WWKRW SSYPLLARAARVVFGAPAS+AVLE DF D GR+MTSSRS+TDAKYV+MILFLHGNLDLIPEDI   PA      Q   P  RL+NT P
Sbjct:   40 WWKRWMSSYPLLARAARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGNLDLIPEDI---PA-----CQPTAPSARLTNTCP 125

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BLAST of mRNA_H-elongata_contig165671.4137.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 7.060e-35
Identity = 70/106 (66.04%), Postives = 83/106 (78.30%), Query Frame = 0

Query:    2 WWKRWESSYPLLARAARVVFGAPASSAVLERDFRDTGRMMTSSRSSTDAKYVDMILFLHGNLDLIPEDIAELPADGVNGAQSKIPERLSNTLPELQGLAGAFGPVD 107
            WWK W  +YPLLAR ARVV GA AS+AVLE DF + GRMMTSSRS+ D+KYV+MILFLHGNLDLIPEDI +L  + V  A++KIP RL+N +  L+ L GAF PVD
Sbjct:  383 WWKMWAHAYPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKL-TEAV--ARTKIPGRLANPVEGLEQLDGAFAPVD 485

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BLAST of mRNA_H-elongata_contig165671.4137.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 1.270e-34
Identity = 69/103 (66.99%), Postives = 80/103 (77.67%), Query Frame = 0

Query:    6 WESSYPLLARAARVVFGAPASSAVLERDFRDTGRMMTSSRSSTDAK-YVDMILFLHGNLDLIPEDIAELPADGVNGAQSKIPERLSNTLPELQGLAGAFGPVD 107
            W   YPLLAR ARVVFGAPAS+AVLERDF + GRMMTSSR + D+  YV+MILFLHGNLDLIPEDI +L  + V  A+SKIP RL+N +  L+ L GAF PVD
Sbjct:    2 WAHVYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKL-TEAV--ARSKIPGRLANPVEGLEQLDGAFAPVD 101

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BLAST of mRNA_H-elongata_contig165671.4137.1 vs. uniprot
Match: A0A6H5JML0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 1.810e-33
Identity = 66/106 (62.26%), Postives = 81/106 (76.42%), Query Frame = 0

Query:    2 WWKRWESSYPLLARAARVVFGAPASSAVLERDFRDTGRMMTSSRSSTDAKYVDMILFLHGNLDLIPEDIAELPADGVNGAQSKIPERLSNTLPELQGLAGAFGPVD 107
            WWK W  +YPLLAR ARVVFGAPAS+AVLE  F + GRM TSSRS+ D+ YV+MI+FLHGNL+LIPEDI +L  + V  A++K P RL+N +  L+ L GAF PVD
Sbjct:  146 WWKMWAHAYPLLARVARVVFGAPASAAVLECYFSNAGRMTTSSRSTMDSTYVEMIMFLHGNLNLIPEDITKL-TEVV--ARTKFPGRLANPVDGLEPLDGAFAPVD 248

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BLAST of mRNA_H-elongata_contig165671.4137.1 vs. uniprot
Match: A0A6H5KGU9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGU9_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 2.560e-29
Identity = 60/107 (56.07%), Postives = 70/107 (65.42%), Query Frame = 0

Query:    2 WWKRWESSYPLLARAARVVFGAPASSAVLERDFRDTGRMMTSSRSSTDAKYVDMILFLHGNLDLIPEDIAELPADGVNGAQSK-IPERLSNTLPELQGLAGAFGPVD 107
            WWKRW SSYPLLARA RVVFGAPAS+A                       YV+MILFLHGNLDLIP+DI  LP DG + A +K +P RL N  P+L+ ++GAFGPVD
Sbjct:   40 WWKRWMSSYPLLARATRVVFGAPASAA-----------------------YVEMILFLHGNLDLIPDDIPALPTDGPDSATNKHMPGRLKNPNPKLERISGAFGPVD 123

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BLAST of mRNA_H-elongata_contig165671.4137.1 vs. uniprot
Match: A0A6H5KW12_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW12_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 5.370e-29
Identity = 63/100 (63.00%), Postives = 75/100 (75.00%), Query Frame = 0

Query:    9 SYPLLARAARVVFGAPASSAVLERDFRDTGRMMTSSRSSTDAKY-VDMILFLHGNLDLIPEDIAELPADGVNGAQSKIPERLSNTLPELQGLAGAFGPVD 107
            +Y LL   ARVVFGAPAS+A LERDF + GRMMTSSRS+ D+KY V+MILFLHGNLDLIPEDI  L  + V  A++  P RL+N +  L+ L GAF PVD
Sbjct:    5 AYLLLTGVARVVFGAPASAAALERDFSNAGRMMTSSRSAMDSKYYVEMILFLHGNLDLIPEDITTL-TEAV--ARTMFPGRLANPVEGLKQLDGAFTPVD 101

[Close]

BLAST of mRNA_H-elongata_contig165671.4137.1 vs. uniprot
Match: A0A6H5KEK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 2.210e-24
Identity = 56/106 (52.83%), Postives = 66/106 (62.26%), Query Frame = 0

Query:    2 WWKRWESSYPLLARAARVVFGAPASSAVLERDFRDTGRMMTSSRSSTDAKYVDMILFLHGNLDLIPEDIAELPADGVNGAQSKIPERLSNTLPELQGLAGAFGPVD 107
            WW++WE SYPLLARAARV FGAPA+                      DAKYV+M+LFLHG LDL PE I EL  + ++   +KIP RLSN +PEL GL G  GPVD
Sbjct:  349 WWEKWEGSYPLLARAARVDFGAPAAG---------------------DAKYVEMVLFLHGKLDLFPEQIPELRDEDIH---AKIPGRLSNPVPELHGLDGTLGPVD 430

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig165671.4137.1 vs. uniprot

BLAST of mRNA_H-elongata_contig165671.4137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23


Match Name	E-value	Identity	Description
D8LFP4_ECTSI	2.450e-41	72.64	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
D8LBK4_ECTSI	1.680e-37	69.81	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JZ82_9PHAE	1.010e-36	66.04	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5L5L6_9PHAE	9.270e-36	74.47	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JNY1_9PHAE	7.060e-35	66.04	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KCJ3_9PHAE	1.270e-34	66.99	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JML0_9PHAE	1.810e-33	62.26	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KGU9_9PHAE	2.560e-29	56.07	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KW12_9PHAE	5.370e-29	63.00	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KEK6_9PHAE	2.210e-24	52.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 2..63 e-value: 1.3E-12 score: 47.3
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 28..107
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 12..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..27
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..11
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 23..27
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 2..65

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig165671	contig	H-elongata_contig165671:1074..1394 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig165671.4137.1	mRNA_H-elongata_contig165671.4137.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig165671 1074..1406 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig165671.4137.1 ID=prot_H-elongata_contig165671.4137.1|Name=mRNA_H-elongata_contig165671.4137.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp
MWWKRWESSYPLLARAARVVFGAPASSAVLERDFRDTGRMMTSSRSSTDA
KYVDMILFLHGNLDLIPEDIAELPADGVNGAQSKIPERLSNTLPELQGLA
GAFGPVD

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008906	HATC_C_dom
IPR012337	RNaseH-like_sf