prot_H-elongata_contig1656.4131.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1656.4131.1
Unique Nameprot_H-elongata_contig1656.4131.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length263
Homology
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 1.710e-30
Identity = 82/294 (27.89%), Postives = 147/294 (50.00%), Query Frame = 0
Query:    6 KVGQNGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLLATAATKDGELRHFDAEKAFLKADIDEELYIEIPGSIRSFRGHRQRRI----RACFVRSLTKRRKWWWSYMWTTFLAHAKDKATMD---------------------------------RFAAELGQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKFDVKKGSKIPTTLGVPTLSKADEPWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPGSAHKRTVMKVM 262
            K  ++GKIEK+K RLVA+GF Q+  V    +    P++ASI+++LA A  K  +L H+D ++AF  A +DE++++ +P       G +  ++    RA +   L +  + W  +   T + +  ++   D                                    A L + F  KD+G+ +++ GC + R+ +A  L+I Q  +++S++ +FDV+  S IP + GV    K D+       E   ++P REA  +++W +T +RPDI+  VRA+AR    P   H + ++K++
Sbjct:   54 KTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGC----GEKSHKVVKAERAIY--GLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDD-------ESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKIL 334          
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: UPI001C91A683 (hypothetical protein n=1 Tax=Modestobacter lapidis TaxID=1608613 RepID=UPI001C91A683)

HSP 1 Score: 124 bits (312), Expect = 5.170e-30
Identity = 85/294 (28.91%), Postives = 138/294 (46.94%), Query Frame = 0
Query:    2 LYERKVGQNGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLLATAATKDGELRHFDAEKAFLKADIDEELYIEIP-GSIRSFRGHRQRRIRACFVRSLTKRRKWWWSY-------------------------MWTTFLAHAKD------KATMDRFAAEL-GQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKFDVKKGSKIPTTLGVPT-LSKADEPWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPGSAHKRTVMKV 261
            ++++K    GKI KYK RLVA+G+ Q+EGV   E +       SIR +L+ AA  D E+   D + AFL  D++EE+Y++ P G +   + +   ++           R W+  +                         M+     +  D         M R   +L  ++F++KD+G A + +G HI R+     L + Q  ++E +++KF++     + T + V   LS    P N EEKE+M   PY  A  +L++    TRPDIA  V  ++R+  NPG  H   V +V
Sbjct:   10 VFKKKQDAEGKIGKYKARLVAKGYAQIEGVDYAEIFSPVAKLTSIRTVLSAAAAYDLEIEQMDVKTAFLHGDLEEEIYMKQPEGFVARGKENLVCKLEKSLYGLKQSPRMWYQKFDSYAQQIGFTRSHADHCVYVKREGEMFVILTLYVDDMLLIGNSTKMIRTVKDLLAKQFEMKDLGAANFILGMHIRRDRARRRLWLGQERYIEGILKKFNMTDCKPVGTPMSVGVKLSAEQSPQNEEEKEQMASIPYASAVGSLMYAMVCTRPDIAQAVGVLSRYMSNPGKEHWIAVKRV 303          
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: A0A6H5JJY0_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY0_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.250e-28
Identity = 84/292 (28.77%), Postives = 142/292 (48.63%), Query Frame = 0
Query:    6 KVGQNGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLLATAATKDGELRHFDAEKAFLKADIDEELYIEIPGSIRSFRGHRQRRIRAC--FVRSLTKRRKWWWSYMWTTFLAHAKDKATMDR---------------------------------FAAELGQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKFDVKKGSKIPTTLGVPTLSKADEPWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPGSAHKRTVMKVM 262
            KV + G+I+K+K RLVA+GF Q+  V    +    P++ASI+++LA A  K   L H+D ++A   A +DEE+++++P       G R  +I      +  L +  + W      T + +  ++   DR                                   A L +KF  K++G+  ++ GC I R+ +A  L+I Q  +++SM+++FDV+  S+IP T G   L          E EE  ++P REA  +++W +T +RPD++  VRA AR   +P   H   +  V+
Sbjct:  677 KVNKEGRIDKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAHTHATLDEEVFLKLPAGC----GDRSYKIVKAEPAIYGLKQSERQWGYLAADTLVENGFEECKADRCVFRKMVDEVVVMIIVIYADDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMLKRFDVQSTSRIPATPGA-DLGPI------REDEEGGEWPVREAIGSMMWMSTFSRPDVSFAVRAAARHAHSPAERHWDAIQTVL 957          
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: A0A4Y2WQ03_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2WQ03_ARAVE)

HSP 1 Score: 123 bits (308), Expect = 2.860e-28
Identity = 85/301 (28.24%), Postives = 149/301 (49.50%), Query Frame = 0
Query:    2 LYERKVGQNGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLLATAATKDGEL-RHFDAEKAFLKADIDEELYIEIPGSIRSFRGHRQRRIRACFVRSLTKR--------RKWW------------WSYMWTT-----------------FLAHAKDKATMDRFAAELGQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKFDVK--KGSKIPTTLGVPTLSKADEPWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPGSAHKRTVMKVM 262
            +Y  K    G+I +YK RLVAQGF QVEG+   ET+        +RM      T++  + +H D E A+L   ++E+LY+E P          Q + +A +V  L K         RKW+            + Y +T                   +  AK++ +M     ++ +KFKL+D+G+  Y +G    +     ++ + Q  ++  +++KFDV   +  K+P ++G+  +SK+  P N +EK+ M KFPYR+   +L++  + TRPDI   V  ++++C NPG  H +  ++++
Sbjct:  160 VYSIKENAEGQILRYKARLVAQGFHQVEGLDYHETFSPVVNFTLVRMFFILLVTRENWIHKHIDIECAYLYGSLNEKLYLEQPEGF-------QEKPKADYVALLKKSLYGLHQSGRKWFKELDETFISIGFYKYKYTNCVYIYQSTVVILVYVDDLVIFAKNEESMKEVITKIKKKFKLRDLGEVKYLLGTEFEQIDG--QVYLHQRKYINKLLKKFDVNICEKVKVPLSVGM-NISKSSCPTNVQEKKFMEKFPYRQLIGSLMFLASRTRPDIQFAVTFLSQYCSNPGLNHWKAALQIL 450          
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 122 bits (306), Expect = 8.310e-28
Identity = 85/300 (28.33%), Postives = 140/300 (46.67%), Query Frame = 0
Query:    2 LYERKVGQNGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLLATAATKDGELRHFDAEKAFLKADIDEELYIEIPGSIRSFRGHRQRRIRACFVRSLTKRRKWWWSYMWTTF----------------------------------LAHAKDKATMDRFAAELGQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKFDVKKGSKIPTTLGVPTLSKADEPWNPEEK------EEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPGSAHKRTVMKV 261
            ++  K G +GKI+KYK RLVA+GF QVEGV  T+T+      ASIRMLLA AA  D E+   D + AFL  D++EE+++E P   +  + H  R  ++ +   L +  + W+  +   F                                  L  AKD+A +D    ELG  +++ D+G+A + +G  I  +     + + QH +VE++++            T G+        P  P +K       E+ +  Y+ A  +L++    TRPD+A  V  +++   +PG  H   +M+V
Sbjct: 1013 VFRIKHGPDGKIQKYKARLVAKGFTQVEGVDYTDTFAPVTKFASIRMLLAFAAKHDLEVHQMDVKSAFLNGDLEEEIFMEAPPGFQQDKAHVWRLQKSLY--GLKQASREWYKKVRALFESLGYSRSNADHSVFYKRGKDGDLTVVAVYVDDMLIFAKDRAAVDHIKLELGVPYEMSDLGEARWILGMEIIHDRARKTITLSQHQYVENILK------------THGMANCRPVSTPMAPNQKLLKLNVPEVDERAYQSALGSLMYAMLGTRPDLAFAVGMLSKHAASPGKDHWTALMRV 1298          
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.100e-27
Identity = 83/288 (28.82%), Postives = 137/288 (47.57%), Query Frame = 0
Query:    6 KVGQNGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLLATAATKDGELRHFDAEKAFLKADIDEELYIEIP------------------GSIRSFR-------------GHRQRRIRACFVRSLTKRRKWWWSYMWTTFLAHAKDKATMDRFAAELGQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKFDVKKGSKIPTTLGVPTLSKADEPWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPGSAHKRTVMKVM 262
            K  + GKI+K+K R+VA+GF Q+  V    +    P++ASI ++LA A  K   L H+D ++A   A +DEE++  +P                  G  +S R             G  Q +   C  R +          ++   +  A      +   A L +KF  K++G+  ++ GC I R+ +A  L+I Q  +++SM+E+FDVK  S+IP T G     K        E EE  ++P R+A  +++W +T +RPD++   RA+AR    P   H   + K++
Sbjct:  900 KTNKEGKIDKFKARVVARGFSQLPNVDYFRSSSPCPSSASIMLMLAVANEKGMNLNHWDVKQASPHATLDEEVFPRLPAGCGDKSHQIVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVRKAIGSMMWVSTFSRPDVSFAARAVARHAHAPAKRHWDAIQKIL 1180          
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: A0A284S2Y9_ARMOS (Uncharacterized protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284S2Y9_ARMOS)

HSP 1 Score: 122 bits (305), Expect = 1.120e-27
Identity = 86/290 (29.66%), Postives = 134/290 (46.21%), Query Frame = 0
Query:   10 NGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLLATAATKDGELRHFDAEKAFLKADI--DEELYIEIPGSIRSFRGHRQRRIRACFVRSLTKRRKWWWSYMWTTFLA---------------------------HAKDKAT-------MDRFAAELGQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKFDVKKGSKIPTTLGVPT-LSKADEPWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPGSAHKRTVMKVM 262
            NG+I+KYK RLVA+GF QV+GV   ET+  T   +S+R +L+ A   + +++ FD   AFL  +   +EE+Y+E P    +   +   R+R          RKW+     TT LA                           H  D          +D    E+ + FK+  +G   + +G  + R+ K H L I Q  +++S++ KF +     +   L   T +S+   P  P +  +MR  PYRE    L+W +T TRPD+A  V  ++RF  NPG  H     +V+
Sbjct:  970 NGEIDKYKARLVARGFTQVQGVDYFETFSPTAKLSSLRTILSIATHYNWDIKLFDYSAAFLNGEFSDNEEIYMEQPPHYTNGNPNEVIRLRRTIYGLKQSSRKWYEKL--TTSLATLGFHALHNDHAVYRLIRGDDIILMAIHIDDSTITGTSPTLIDEIQEEIARIFKITMLGPLNWLLGMEVKRDRKNHTLSISQTTYIDSLLRKFGMTDCKSVSVPLDPMTQISREQCPNTPSDVADMRDVPYRELIGGLIWLSTATRPDLAFTVCVLSRFLDNPGRPHWNAAKRVL 1257          
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: A0A2P4XDS9_9STRA (Polyprotein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XDS9_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.380e-27
Identity = 85/274 (31.02%), Postives = 133/274 (48.54%), Query Frame = 0
Query:    2 LYERKVGQNGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLLATAATKDGELRHFDAEKAFLKADIDEELYIEIPGSIRSFRGHRQRRIRACFVRSLTKRRKWWWSYMWTTFLAH-------------------AKDKATMDRFAAELGQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKFDVKKGSKIPTTLGVPT-----LSKADEPWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPG 251
            ++ +K  +NG++ +YK RLVA+GF Q  G+   ETY       SIRM+LA     D  +   DA+ AFL + + + +Y+EIP  +++ +G   + ++A +   L +    W   +   FL +                   AK    +      L   FK+K++G A + +G  I+ +  A  L I Q  +++ + + F    G K    +G P      LSKA  P   EE+ EM+  PYR     LL+ TT TRPDIA  V  ++RF +NPG
Sbjct:  621 VFAKKRDENGRVTRYKARLVAKGFRQKYGIDFFETYSPVANMDSIRMVLAVCVAFDYLMEQLDADTAFLNSSLSDIVYMEIPHGMKNAKGMVCKLLKAIY--GLKQAASAWNKTIHRVFLLNDFKSCGADQCGYVDDMIIAAKTVGEISEVKGTLNNAFKMKELGTAKFILGMEINHDRNASTLMIKQTRYIDDVAQHF----GQKDAKPVGNPCSSNLKLSKAQLPGTVEERIEMQSKPYRSLIGCLLYITTCTRPDIAYIVTQLSRFLENPG 888          
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: A0A4S4K4Q2_9APHY (Uncharacterized protein n=2 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K4Q2_9APHY)

HSP 1 Score: 121 bits (304), Expect = 1.530e-27
Identity = 93/295 (31.53%), Postives = 145/295 (49.15%), Query Frame = 0
Query:    6 KVGQNGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLLATAATKDGELRHFDAEKAFLKA--DIDEELYIEIPG--SIRSFRGHRQRRIRACFVRSLTKRRKWWWSYM---------------WTTFLA-----------HAKD-------KATMDRFAAELGQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKFDVK--KGSKIPTTLGVPTLSKADEPWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPGSAHKRTVMKV 261
            K    G I+KYK RLVAQGF QV GV   ET+      ASIR++LA AA    E++ FD   A+L +  D DEE+Y+E P   S++  + H  R  +A +   L +  + W+ ++               +  F A           H  D          + ++  +LG K+ L D+G   + +G  ++R+ +A  L + QH +++S++ +F+    K S IP    +  L K+  P +  +   MRK PYREA  +L++    TRPDI+  V  +A+F  NPG  H   V +V
Sbjct: 1016 KKDATGAIDKYKARLVAQGFTQVYGVDYFETFAPVAKIASIRLVLAIAARNGWEVQSFDFNSAYLNSVLDDDEEIYLEQPPQFSLKDPKLHVLRLKKALY--GLKQGGRKWYEHLCIALADLGFKRAEADYGVFYAKVGESLVLLAIHVDDCIITGNSSTLISQYKRQLGDKYSLTDLGPVSWLLGIKVTRDLEARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNIQFL-KSQCPTSLIDIARMRKIPYREAIGSLMYAAVGTRPDISFAVSTLAQFSHNPGWIHWEAVKRV 1307          
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: A0A146IDX7_MYCCL (Polyprotein (Fragment) n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146IDX7_MYCCL)

HSP 1 Score: 120 bits (302), Expect = 2.770e-27
Identity = 82/260 (31.54%), Postives = 123/260 (47.31%), Query Frame = 0
Query:    6 KVGQNGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLLATAATKDGELRHFDAEKAFLKADI--DEELYIEIPGSIRSFRGHRQRRIRACFVRSLTKRRKWWWSYMWTTFLAHAKDKATMDRFAAELGQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKFDVKKGSKIPTTLGVP-TLSKADEPWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPGSAHKRTVMKVM 262
            K  +NG IEKYK RLVA+GF QV+GV   ET+  T   +S+R LL+ AA  + E   FD   AFL  +   DEE+++E P    +    +  R+           RK                 A +D    E+G    +  +G   + +G  + RN     L + Q  ++++++EKF +     +   L     LS    P +  EK +M+K PYRE    L+W +T TRPD+A  V  ++RF  NPG  H     +V+
Sbjct:  840 KRQENGAIEKYKARLVARGFTQVQGVDYFETFSPTAKLSSLRTLLSIAAGYNWETEVFDYSAAFLNGEFSGDEEIFMEQPPHYHNGDNTQVIRLSRTIYGLKQSARK---------CTITGSSPALIDEVQREIGALLPITRLGPISWLLGMEVKRNRAERTLTLTQSTYIDALIEKFGMSNAKPLSVPLDPNHQLSIEQCPTSDTEKLDMKKVPYRELIGGLVWLSTATRPDLAFTVTTLSRFISNPGRPHWDAAKRVL 1090          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCG0_9PHAE1.710e-3027.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001C91A6835.170e-3028.91hypothetical protein n=1 Tax=Modestobacter lapidis... [more]
A0A6H5JJY0_9PHAE1.250e-2828.77CCHC-type domain-containing protein (Fragment) n=1... [more]
A0A4Y2WQ03_ARAVE2.860e-2828.24Retrovirus-related Pol polyprotein from transposon... [more]
A0A060SSE0_PYCCI8.310e-2828.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JQW4_9PHAE1.100e-2728.82Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A284S2Y9_ARMOS1.120e-2729.66Uncharacterized protein n=2 Tax=Armillaria ostoyae... [more]
A0A2P4XDS9_9STRA1.380e-2731.02Polyprotein n=1 Tax=Phytophthora palmivora var. pa... [more]
A0A4S4K4Q2_9APHY1.530e-2731.53Uncharacterized protein n=2 Tax=Hermanssonia centr... [more]
A0A146IDX7_MYCCL2.770e-2731.54Polyprotein (Fragment) n=1 Tax=Mycena chlorophos T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 5..84
e-value: 9.4E-14
score: 51.6
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 9..84
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 9..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1656contigH-elongata_contig1656:4773..5657 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1656.4131.1mRNA_H-elongata_contig1656.4131.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1656 4300..5696 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1656.4131.1 ID=prot_H-elongata_contig1656.4131.1|Name=mRNA_H-elongata_contig1656.4131.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=263bp
MLYERKVGQNGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLL
ATAATKDGELRHFDAEKAFLKADIDEELYIEIPGSIRSFRGHRQRRIRAC
FVRSLTKRRKWWWSYMWTTFLAHAKDKATMDRFAAELGQKFKLKDMGDAM
YYMGCHISRNHKAHELKIDQHLHVESMMEKFDVKKGSKIPTTLGVPTLSK
ADEPWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNP
GSAHKRTVMKVM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like