prot_H-elongata_contig16546.4122.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16546.4122.1
Unique Nameprot_H-elongata_contig16546.4122.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length616
Homology
BLAST of mRNA_H-elongata_contig16546.4122.1 vs. uniprot
Match: A0A6H5K108_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K108_9PHAE)

HSP 1 Score: 442 bits (1136), Expect = 1.080e-144
Identity = 278/591 (47.04%), Postives = 350/591 (59.22%), Query Frame = 0
Query:   49 TPKAASERTG----AIKDNDITLEAMEAWLDEAGVDRRG------STRLRRFAGRGIGLEASRELERDSTVASIPLRSCFSSDPVDSPHGTLRALAHVVLEGLSTTATVIHPASSVTEVALDKDVMSVTLQVLLECMAGACSEFAPWMAMLPRGGDLNLPALWRDDDLRGLEGTLVSREVRQCLTTAETERRHVEALIVSVVGRQVGDNG-EGRGGALLREVLATGDGTLAGRPTLVEWLNARCIVQSRAYRVGERYILIPLVDFANHDDNVAFSVCPGDGVFTELDEVVLVADRNYQPGQEVCASYGSRMDNAKRLYSFGFVSLSEPCCS-----LLGDKIRLPNEAFCDVDVPVDPSDPLCTFKEGVLRRLLHAED-GAARVEAVFPLQPCCPYVRQLVDGPAMSYLHVLLPLFRFVALTSHECLSNGIVVDVSGAKDGSSDIGVVSGEITINNSRGTIDHSDRLAQEGAAFPGAWWSPYLVSNEDHTVFAHVRRFVSWDNERLALRLLSEHCVNRLNAIGLRPSDLEALREAANHGGAEKLNTA-EPRGLLIAAARVGEAVAWHALLGAVNDSVE------KDQTWVS 615
            T  AA+E T     + + +  +L+ ME WLDE GVDRRG      + RL   +G+GIGL A+ ELERDSTVASIP + CFSSD  D+P GTLRA AH +   + ++A     A S   ++ ++DV  VTLQV LE  AGA S  APWMAML R G LNLPALW D DL GL+GTLV ++V  CL  A++ER  V + +V+ +    G  G EG       E        + GRPT  EWL+ARC VQSRAYRVG RY+LIPLVDFANHDD+VAF+VCPGDGVFT  DEVV VADR Y+PG+EVC +YG  MDNAKRL+SFGFV+L +         L G+ + LP EAFCDV++ +  +D L   KE V R     +D  +  + AVFPL P   +V QLVDGPA  ++  +LP+ R VALT  E        D   A D  S +G      TI  S  T   SDR              P L + +   V AH+   +S  NE+ ALRLL+E C  RL ++ L  SD+EAL   A+     K   A  PR LL A  RVGEA+AW+ALL A ++ +E      ++QTW S
Sbjct:   47 TNVAAAEETNGRCESPRSSKSSLKEMELWLDEIGVDRRGGGCGPPAARLTWVSGKGIGLTAAVELERDSTVASIPRKICFSSDAADAPAGTLRAWAHDLFASIPSSAAA---ACSEKHLSFERDVAVVTLQVFLERAAGASSTCAPWMAMLNRKGHLNLPALWPDSDLEGLKGTLVLQDVEACLARAKSERVAVASAMVTGLRGDFGAGGREGGEAGGFPECTWLDPSNMEGRPTFAEWLHARCTVQSRAYRVGRRYLLIPLVDFANHDDDVAFAVCPGDGVFTGSDEVVFVADRTYRPGEEVCTTYGD-MDNAKRLFSFGFVTLKQHAAQPFQRRLTGNMLALPTEAFCDVELTIAATDALRVVKETVFRERRAGDDLSSPSLSAVFPLTP---FVSQLVDGPARLFVESVLPVLRLVALTPDELTGGEAFGD---AFDTRSALG------TIFESMVTDTSSDRC-------------PVLAAGKGRQVLAHLGSRLSLQNEQQALRLLAEQCRTRLGSLNLTTSDVEALSAVADDSHESKAFAACGPRSLLCATVRVGEAIAWYALLKACDEKMEGCTGVREEQTWAS 608          
BLAST of mRNA_H-elongata_contig16546.4122.1 vs. uniprot
Match: D7G231_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G231_ECTSI)

HSP 1 Score: 434 bits (1116), Expect = 1.080e-141
Identity = 283/632 (44.78%), Postives = 359/632 (56.80%), Query Frame = 0
Query:   10 RYLLFT-VPIVMAMRPMAVT-LPRSGWSITLRHERMKYCNITPKAASERTG----AIKDNDITLEAMEAWLDEAGVDRRG------STRLRRFAGRGIGLEASRELERDSTVASIPLRSCFSSDPVDSPHGTLRALAHVVLEGLSTTATVIHPASSVTEVALDKDVMSVTLQVLLECMAGACSEFAPWMAMLPRGGDLNLPALWRDDDLRGLEGTLVSREVRQCLTTAETERRHVEALIVSVVGRQVGDNGEGRG-GALLREVLATGDGTLAGRPTLVEWLNARCIVQSRAYRVGERYILIPLVDFANHDDNVAFSVCPGDGVFTELDEVVLVADRNYQPGQEVCASYGSRMDNAKRLYSFGFVSLSEPCCSL-----LGDKIRLPNEAFCDVDVPVDPSDPLCTFKEGVLRRLLHAEDGAA-RVEAVFPLQPCCPYVRQLVDGPAMSYLHVLLPLFRFVALTSHECLSNGIVVDVSGAKDGSSDIGVVSGEITINNSRGTIDHSDRLAQEGAAFPGAWWSPYLVSNEDHTVFAHVRRFVSWDNERLALRLLSEHCVNRLNAIGLRPSDLEALREAANHGGAEKLNTA-EPRGLLIAAARVGEAVAWHALLGAVNDSVE------KDQTWVS 615
            R+LL+  V +V+   P   T L R  W  +    R      T  A +E T     + + +  +L+ +E WLDE GVDRRG      + RL   +G+GIGL AS ELERDSTVASIP R CFSSD  D+P GTLRA AH +   + ++A     A S   ++ + DV  VTLQV LE  AG  S  APWMAML R G LNLPALW D DL GL+GTLV ++V  CL  A++ER  V A +V  +  ++G  G   G G    E        + GRPT  EWL+ARC VQSRAYRV  RY+LIPLVDFANHDD+VAF+VCPGDGVFT  DEVV VADR Y+PG+EVC +YG  MDNAKRL+SFGFV+L +           G+ + LP EAFCDV++ +  +D L  FKE VLR     ED  +  + A+FPL P   +V QLV+GPA  ++  +LP+ R VALT  E        D    +        V G  T  +SR T   SD+              P L +     V AH+   +S  NE+ ALRLL+E C  RL ++     D+E LR  A+     K   A  PR LL A  RVGEA+AW+ALL A  + +E      ++QTW S
Sbjct:    6 RWLLYCRVALVLLQLPSPATALVRYSWCRSALLAREGAIGCTNVATAEETDGRCESPRSSKSSLKEIELWLDEVGVDRRGGGCGPPAARLTSVSGKGIGLTASVELERDSTVASIPRRICFSSDAADAPAGTLRAWAHDLFASIPSSAAA---ACSEKHLSFEGDVAVVTLQVFLESAAGERSTCAPWMAMLNRKGSLNLPALWPDSDLEGLKGTLVLQDVEACLARAKSERVAVAAAMVKGLRGELGGGGRAGGEGGGFPECPWLDTSNMEGRPTFAEWLHARCTVQSRAYRVRRRYLLIPLVDFANHDDDVAFAVCPGDGVFTGSDEVVFVADRTYRPGEEVCTTYGD-MDNAKRLFSFGFVTLKQHAAQPSQRRPAGNMLPLPTEAFCDVELTIAATDELRVFKEAVLRERQAGEDLVSPNLGAMFPLTP---FVSQLVEGPARLFVESVLPVMRLVALTPEELTGGDAFGDACDTRS-------VFG--TSFDSRMTDTSSDKC-------------PVLAAGTGRQVLAHLGSRLSLQNEQQALRLLAEQCRTRLGSLNPTFGDVETLRAVADDSHESKTFAACGPRSLLCATVRVGEAIAWYALLKACAEKMEGGTGVREEQTWAS 608          
BLAST of mRNA_H-elongata_contig16546.4122.1 vs. uniprot
Match: A0A6A1W1K1_9ROSI (Histone-lysine N-methyltransferase setd3 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1W1K1_9ROSI)

HSP 1 Score: 67.4 bits (163), Expect = 4.320e-8
Identity = 53/200 (26.50%), Postives = 92/200 (46.00%), Query Frame = 0
Query:  162 DVMSVTLQVLLECMAGACSEFAPWMAMLPRGGDLNLPALWRDDDLRGLEGTLVSREVRQCLTTAETERRHVEALIVSVVGRQVGDNGEGRGGALLREVLATGDGTLAGRPTLVEWLNARCIVQSRAYRVGERYILIPLVDFANHDDNVAFSVCPGDGVFTELDEVV--LVADRNYQPGQEVCASYGSRMDNAKRLYSFGF 359
            ++  + + +L+E   G  SE+AP+++ LP+ G+++    W  D+L  +  + V +E     +  E +   V+  +  +                           L G  T  ++++A  +V SRA+   +   LIPL DF NHD   + SV     V ++ D  V  ++ADRNY PG++V   YG +  N   +  FGF
Sbjct:  156 NIAKLAVVILVEQKLGQKSEWAPYISRLPQPGEMHNTIFWSKDELEMINQSSVYQETLNLKSEIEKDFLAVKPALQRIP-------------------------ELLGDVTYKDFMHACALVGSRAWGSTKGLSLIPLADFLNHD-GASESV-----VLSDEDRQVSEVIADRNYDPGEQVLIRYG-KFPNGTLMLDFGF 323          
BLAST of mRNA_H-elongata_contig16546.4122.1 vs. uniprot
Match: A0A7S1XLD1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLD1_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.530e-8
Identity = 40/106 (37.74%), Postives = 59/106 (55.66%), Query Frame = 0
Query:  254 ALLREVLATGDGTLAGRPTLVEWLNARCIVQSRAYRVGERYILIPLVDFANHDDNVAFSVCPGDGVFTELDEVVLVADRNYQPGQEVCASYGSRMDNAKRLYSFGF 359
            ALL   L TG G  A       +++A   + SRAY +  + +LIPL+D ANH+D+V ++V   DGVFT  D + LV     + G +V +SYG+   ++     FGF
Sbjct:   77 ALLAPHLPTGLGEAA-------YVHASAYLLSRAYSIDGKLVLIPLIDMANHNDDVPYAVEKSDGVFTPADSLNLVLAAPRERGAQVFSSYGAHC-SSDLFQCFGF 174          
BLAST of mRNA_H-elongata_contig16546.4122.1 vs. uniprot
Match: A0A6H5JCQ4_9PHAE (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCQ4_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 1.230e-6
Identity = 95/363 (26.17%), Postives = 137/363 (37.74%), Query Frame = 0
Query:   62 DNDIT---LEAMEAWLDEAGVDRRGSTRLRRFAGR-----GIGLEASRELERDSTVASIPLRSCFSSDPVDSPHGTLRALAHVV--LEGLSTTATVIHPASSVTEVALDKDVMSVTLQVLLECMAGACSEFAPWMAMLPRGGDLNLPALWRDDDL--------RGLEGTLVSREVRQCLTTAETERRHVEALIVSVVGRQVGDNGEGRGGALLREVLATGDGTLAGRPTLVEWLNARCIVQSRAYRVGERYILIPLVDFANHDDNVAFSVCPGD--GVFTELDEVVLVADRNYQPGQEVCASYGSRMDNAKRLYSFGFVSLSEPCCSLLGDKIRLPNEAFCDVDVPVDPSDPLCTFKEGVLRR 404
            D D+T   L+A  AWL ++GV    +  L   AGR     G GL A++ +E   +V +IP     ++  + S       +A  V   EG +             E  L      + LQVL E      S+ APW+A+LP  G+L +P  W + DL        RG+ G +   +      +     +H +       G                             P    W  A  +  SR++ V     L PLVDFANH      S   G   G+F     VVL A + Y+ G+E   SYG +   A  L   GFV    P  S         +E  C+++  +   D     KE +L R
Sbjct:   79 DPDVTPGALDAFHAWLTKSGVRLTDNAVL---AGRSPLAGGRGLVATKAIETGQSVLAIPQSLGLTAAGLKSS-----GIAQYVKGFEGWTG------------ETGL------IALQVLWERALREGSKMAPWIAVLPTEGELEMPLFWGEADLTLADASSTRGISGFVADVDEDFAWLSENAFSKHPKVFPADKFG-----------------------------PGDFRW--AVGVALSRSFFVDGELRLTPLVDFANHSSLRGVSEPTGGTTGLFGSK-AVVLRAGKKYEEGEEFFVSYGPK-GAAGYLEENGFV----PPVS--------GSEVTCELEFSIPEDDKFFDDKEDILER 370          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16546.4122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K108_9PHAE1.080e-14447.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G231_ECTSI1.080e-14144.78SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6A1W1K1_9ROSI4.320e-826.50Histone-lysine N-methyltransferase setd3 n=1 Tax=M... [more]
A0A7S1XLD1_9STRA4.530e-837.74Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A6H5JCQ4_9PHAE1.230e-626.17SET domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1410.10coord: 64..360
e-value: 1.6E-32
score: 114.8
NoneNo IPR availablePANTHERPTHR13271UNCHARACTERIZED PUTATIVE METHYLTRANSFERASEcoord: 71..561
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..615
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.631
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 68..360
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR001214SET domainPFAMPF00856SETcoord: 94..345
e-value: 7.2E-8
score: 33.0
IPR001214SET domainPROSITEPS50280SETcoord: 83..345
score: 9.773

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16546contigH-elongata_contig16546:3579..7169 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16546.4122.1mRNA_H-elongata_contig16546.4122.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16546 1184..7169 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16546.4122.1 ID=prot_H-elongata_contig16546.4122.1|Name=mRNA_H-elongata_contig16546.4122.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=616bp
MRPIRLYLGRYLLFTVPIVMAMRPMAVTLPRSGWSITLRHERMKYCNITP
KAASERTGAIKDNDITLEAMEAWLDEAGVDRRGSTRLRRFAGRGIGLEAS
RELERDSTVASIPLRSCFSSDPVDSPHGTLRALAHVVLEGLSTTATVIHP
ASSVTEVALDKDVMSVTLQVLLECMAGACSEFAPWMAMLPRGGDLNLPAL
WRDDDLRGLEGTLVSREVRQCLTTAETERRHVEALIVSVVGRQVGDNGEG
RGGALLREVLATGDGTLAGRPTLVEWLNARCIVQSRAYRVGERYILIPLV
DFANHDDNVAFSVCPGDGVFTELDEVVLVADRNYQPGQEVCASYGSRMDN
AKRLYSFGFVSLSEPCCSLLGDKIRLPNEAFCDVDVPVDPSDPLCTFKEG
VLRRLLHAEDGAARVEAVFPLQPCCPYVRQLVDGPAMSYLHVLLPLFRFV
ALTSHECLSNGIVVDVSGAKDGSSDIGVVSGEITINNSRGTIDHSDRLAQ
EGAAFPGAWWSPYLVSNEDHTVFAHVRRFVSWDNERLALRLLSEHCVNRL
NAIGLRPSDLEALREAANHGGAEKLNTAEPRGLLIAAARVGEAVAWHALL
GAVNDSVEKDQTWVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001214SET_dom