prot_H-elongata_contig16504.4100.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16504.4100.1
Unique Nameprot_H-elongata_contig16504.4100.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length121
Homology
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BLAST of mRNA_H-elongata_contig16504.4100.1 vs. uniprot
Match: D7FXV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV5_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 2.220e-22
Identity = 57/125 (45.60%), Postives = 77/125 (61.60%), Query Frame = 0 
Query:    1 MTSLSERARVTLPTGQAVSKEEYKLACAASMDDGTTLGKAG--SGDLERLNAVALARPLLSPARAFATRA----EKSGRLCIFIPFKAHANRVTEMRMYAQNIALLAARGYTMAPDDNFAPVIRP 119
            M SLSE+A VTLP GQ V+K+EY+LAC  SM D TT+G+     G L  ++ V  +   +  A+A + +     + S     F+      N++ E+RMYAQNIALLAARGYTM P  ++ PVIRP
Sbjct:   52 MDSLSEQASVTLPIGQTVTKDEYRLACENSMGD-TTVGETSLHDGKLVSIDRVNFSVEAMVTAKATSLKTGFQQDVSYPAAFFMTIDLRTNKLAEVRMYAQNIALLAARGYTMIPSSSYGPVIRP 175
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16504.4100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXV5_ECTSI2.220e-2245.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16504contigH-elongata_contig16504:1532..4633 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16504.4100.1mRNA_H-elongata_contig16504.4100.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16504 908..5230 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16504.4100.1 ID=prot_H-elongata_contig16504.4100.1|Name=mRNA_H-elongata_contig16504.4100.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp
MTSLSERARVTLPTGQAVSKEEYKLACAASMDDGTTLGKAGSGDLERLNA
VALARPLLSPARAFATRAEKSGRLCIFIPFKAHANRVTEMRMYAQNIALL
AARGYTMAPDDNFAPVIRPA*
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