prot_H-elongata_contig164944.4092.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig164944.4092.1
Unique Nameprot_H-elongata_contig164944.4092.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length103
Homology
BLAST of mRNA_H-elongata_contig164944.4092.1 vs. uniprot
Match: A0A6H5LAN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAN0_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 3.850e-55
Identity = 90/101 (89.11%), Postives = 98/101 (97.03%), Query Frame = 0
Query:    1 ETRRDIANFLRIFRKDLDPLSIGEFLSEPDVDNGDYWKAIRLQYVRAISFHGKTLEEALRHLLTDSGFRLPGESQKVDRLLSAFAECYVADNRDNPSCPFT 101
            +T RDIANFLRI++KDLDPLSIG+FLSEPDVD GDYWKAIRLQYVRAI+FHG TLEEALRHLLTDSGFRLPGESQKVDRL+S+FAECYVADNRDNP+CPFT
Sbjct:  315 DTPRDIANFLRIYKKDLDPLSIGDFLSEPDVDGGDYWKAIRLQYVRAIAFHGMTLEEALRHLLTDSGFRLPGESQKVDRLVSSFAECYVADNRDNPTCPFT 415          
BLAST of mRNA_H-elongata_contig164944.4092.1 vs. uniprot
Match: D8LKD8_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD8_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 1.800e-54
Identity = 89/100 (89.00%), Postives = 97/100 (97.00%), Query Frame = 0
Query:    1 ETRRDIANFLRIFRKDLDPLSIGEFLSEPDVDNGDYWKAIRLQYVRAISFHGKTLEEALRHLLTDSGFRLPGESQKVDRLLSAFAECYVADNRDNPSCPF 100
            +T RDIANFLRI++KDLDPLSIG+FLSEPDVD GDYWKAIRLQYVRAI+FHG TLEEALRHLLTDSGFRLPGESQKVDRL+S+FAECYVADNRDNP+CPF
Sbjct:  318 DTPRDIANFLRIYKKDLDPLSIGDFLSEPDVDGGDYWKAIRLQYVRAIAFHGMTLEEALRHLLTDSGFRLPGESQKVDRLVSSFAECYVADNRDNPTCPF 417          
BLAST of mRNA_H-elongata_contig164944.4092.1 vs. uniprot
Match: A0A835ZFI0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFI0_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.020e-40
Identity = 71/102 (69.61%), Postives = 89/102 (87.25%), Query Frame = 0
Query:    1 ETRRDIANFLRIFRKDLDPLSIGEFLSEPDVDNGDYWKAIRLQYVRAISFHGKTLEEALRHLLTDSGFRLPGESQKVDRLLSAFAECYVADNRDNPSCPFTT 102
            +T RDIANFLR+++ DLDP SIG+FLSEPD+D  DY++ IRLQY+RA++FHG +LEEALRHLLT+SGFRLPGE+QK+DRLLSAFAEC+  DN  +  CPFT+
Sbjct: 1746 DTPRDIANFLRLYQADLDPGSIGDFLSEPDLDGTDYFRLIRLQYIRAVNFHGMSLEEALRHLLTNSGFRLPGEAQKIDRLLSAFAECFFHDNAQH--CPFTS 1845          
BLAST of mRNA_H-elongata_contig164944.4092.1 vs. uniprot
Match: W7U6C9_9STRA (Brefeldin a-inhibited guanine nucleotide-exchange n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6C9_9STRA)

HSP 1 Score: 128 bits (322), Expect = 2.350e-32
Identity = 59/102 (57.84%), Postives = 76/102 (74.51%), Query Frame = 0
Query:    1 ETRRDIANFLRIFRKDLDPLSIGEFLSEPD-VDNGDYWKAIRLQYVRAISFHGKTLEEALRHLLTDSGFRLPGESQKVDRLLSAFAECYVADNRDNPSCPFT 101
            +T RD+A+FLR++R  LDP +IG++L E     +  YW  +RL YVRA+SFH  TLE+ALRH LT  GFRLPGE+QK+DRL+S FAECY  DN+  P CPF+
Sbjct: 1335 DTPRDVASFLRVYRDLLDPEAIGDYLGEGGHAHDAAYWSLLRLSYVRAVSFHNMTLEQALRHFLTRCGFRLPGEAQKIDRLISVFAECYFQDNQGMPCCPFS 1436          
BLAST of mRNA_H-elongata_contig164944.4092.1 vs. uniprot
Match: B8BTP5_THAPS (Guanyl nucleotide exchange factor (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTP5_THAPS)

HSP 1 Score: 113 bits (282), Expect = 2.870e-28
Identity = 53/100 (53.00%), Postives = 70/100 (70.00%), Query Frame = 0
Query:    4 RDIANFLRIFRKDLDPLSIGEFLSEPDVDNGD--YWKAIRLQYVRAISFHGKTLEEALRHLLTDSGFRLPGESQKVDRLLSAFAECYVADNR-DNPSCPF 100
            RD+++FLRI +  +DP+ +GE+L E  +D  D  YW  IR  Y RAISF G  +E+ALRH LT  GFRLPGE+QK+DR++S F++CY  DN  D   CPF
Sbjct:  139 RDVSSFLRIQQSSIDPVILGEYLGEGGIDGADKDYWNQIRFNYARAISFVGMNVEQALRHFLTACGFRLPGEAQKIDRIISTFSQCYWEDNAGDLQKCPF 238          
BLAST of mRNA_H-elongata_contig164944.4092.1 vs. uniprot
Match: A0A7R9VJ36_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VJ36_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.760e-27
Identity = 52/100 (52.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query:    4 RDIANFLRIFRKDLDPLSIGEFLSEPDVDNGD--YWKAIRLQYVRAISFHGKTLEEALRHLLTDSGFRLPGESQKVDRLLSAFAECYVADNR-DNPSCPF 100
            RD+A+FLR+ +  +DP ++GE+L E  +D  D  YW  IR  YVRAISF G  +E+ LRH LT+ GFRLPGE+Q++DR++S F++CY  DN  D+  CPF
Sbjct:   99 RDVASFLRLHQSKIDPSALGEYLGEGGIDGRDVEYWNLIRFNYVRAISFVGMNVEQGLRHFLTNCGFRLPGEAQRIDRIISTFSQCYWEDNAGDHNRCPF 198          
BLAST of mRNA_H-elongata_contig164944.4092.1 vs. uniprot
Match: A0A7S4QRS1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QRS1_9STRA)

HSP 1 Score: 113 bits (282), Expect = 5.860e-27
Identity = 55/100 (55.00%), Postives = 71/100 (71.00%), Query Frame = 0
Query:    4 RDIANFLRIFRKDLDPLSIGEFLSEPDVDNGD--YWKAIRLQYVRAISFHGKTLEEALRHLLTDSGFRLPGESQKVDRLLSAFAECYVADNR-DNPSCPF 100
            RD+A+FLRI +  LD +++GE+L E   D  D  YW  IR  YVRAISF G  +E+ LRH LT SGFRLPGE+QK+DR++S F++CY  DN  D+  CPF
Sbjct: 1465 RDVASFLRIHQARLDQIALGEYLGEGGKDGADIEYWNLIRFNYVRAISFVGMNVEQGLRHFLTCSGFRLPGEAQKIDRIISTFSQCYWEDNAGDHLRCPF 1564          
BLAST of mRNA_H-elongata_contig164944.4092.1 vs. uniprot
Match: A0A1E7FPT4_9STRA (SEC7-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FPT4_9STRA)

HSP 1 Score: 109 bits (272), Expect = 8.860e-27
Identity = 54/99 (54.55%), Postives = 69/99 (69.70%), Query Frame = 0
Query:    4 RDIANFLRIFRKDLDPLSIGEFLSE--PDVDNGDYWKAIRLQYVRAISFHGKTLEEALRHLLTDSGFRLPGESQKVDRLLSAFAECYVADNR-DNPSCP 99
            RDI++FLRI  +DL+P  +G +L E   D    ++W  IR  Y+RAISF G T+EE LRHLLT  GFRLPGE+Q++DRL+S FA CY  DN  D  +CP
Sbjct:  138 RDISSFLRIHCEDLNPSDLGSYLGEGGSDPSETEFWNLIRFNYIRAISFVGMTVEEGLRHLLTQGGFRLPGEAQQIDRLISTFARCYWEDNAGDLINCP 236          
BLAST of mRNA_H-elongata_contig164944.4092.1 vs. uniprot
Match: A0A7S2LRY4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LRY4_9STRA)

HSP 1 Score: 109 bits (272), Expect = 8.230e-26
Identity = 49/100 (49.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query:    4 RDIANFLRIFRKDLDPLSIGEFLSEPDVD--NGDYWKAIRLQYVRAISFHGKTLEEALRHLLTDSGFRLPGESQKVDRLLSAFAECYVADNR-DNPSCPF 100
            + +++FLR+ +  +DP  +GE+L E  +D  + DYW  IR  YVRA+SF G  +E+ALRH LT+ GFRLPGE+Q++DR++S F++CY  DN  D  +CPF
Sbjct:   96 KHVSSFLRVHQSSIDPAILGEYLGEGGIDGIDKDYWNLIRFYYVRAVSFVGMNIEKALRHFLTNCGFRLPGEAQRIDRVISTFSQCYWEDNAGDIANCPF 195          
BLAST of mRNA_H-elongata_contig164944.4092.1 vs. uniprot
Match: A0A7S1TSV1_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSV1_9STRA)

HSP 1 Score: 105 bits (261), Expect = 4.010e-24
Identity = 54/102 (52.94%), Postives = 66/102 (64.71%), Query Frame = 0
Query:    1 ETRRDIANFLRIFRKDLDPLSIGEFLSEPDVDNGD--YWKAIRLQYVRAISFHGKTLEEALRHLLTDSGFRLPGESQKVDRLLSAFAECYVADNRDNPSCPF 100
            +T RDIA+FLR++  +L    IG++L E      D  Y+  IRL YVR ISF G   E ALRH LT  GF+LPGE+QKVDR+LS F   Y ADN+  P CPF
Sbjct: 1296 DTPRDIASFLRLYAYELTEEDIGDYLGEGGATESDEKYYNLIRLSYVRPISFVGMPFEPALRHFLTSCGFKLPGEAQKVDRILSTFCLRYWADNQGTPVCPF 1397          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig164944.4092.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LAN0_9PHAE3.850e-5589.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKD8_ECTSI1.800e-5489.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835ZFI0_9STRA1.020e-4069.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U6C9_9STRA2.350e-3257.84Brefeldin a-inhibited guanine nucleotide-exchange ... [more]
B8BTP5_THAPS2.870e-2853.00Guanyl nucleotide exchange factor (Fragment) n=1 T... [more]
A0A7R9VJ36_9STRA2.760e-2752.00Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S4QRS1_9STRA5.860e-2755.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1E7FPT4_9STRA8.860e-2754.55SEC7-like protein (Fragment) n=1 Tax=Fragilariopsi... [more]
A0A7S2LRY4_9STRA8.230e-2649.00Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S1TSV1_9STRA4.010e-2452.94Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023394Sec7, C-terminal domain superfamilyGENE3D1.10.1000.11coord: 50..102
e-value: 6.2E-12
score: 47.3
IPR000904Sec7 domainPFAMPF01369Sec7coord: 2..93
e-value: 2.5E-20
score: 73.0
IPR000904Sec7 domainPROSITEPS50190SEC7coord: 4..102
score: 11.186
NoneNo IPR availablePANTHERPTHR10663GUANYL-NUCLEOTIDE EXCHANGE FACTORcoord: 4..94
IPR035999Sec7 domain superfamilySUPERFAMILY48425Sec7 domaincoord: 3..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig164944contigH-elongata_contig164944:133..836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig164944.4092.1mRNA_H-elongata_contig164944.4092.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig164944 133..836 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig164944.4092.1 ID=prot_H-elongata_contig164944.4092.1|Name=mRNA_H-elongata_contig164944.4092.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp
ETRRDIANFLRIFRKDLDPLSIGEFLSEPDVDNGDYWKAIRLQYVRAISF
HGKTLEEALRHLLTDSGFRLPGESQKVDRLLSAFAECYVADNRDNPSCPF
TT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023394Sec7_C_sf
IPR000904Sec7_dom
IPR035999Sec7_dom_sf