prot_H-elongata_contig164905.4091.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig164905.4091.1
Unique Nameprot_H-elongata_contig164905.4091.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length111
Homology
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: UPI001E1E1C50 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1C50)

HSP 1 Score: 63.5 bits (153), Expect = 1.980e-9
Identity = 41/108 (37.96%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    4 TAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIDLALRPVLEEPSIKQTLAKHNKMTKHVH 111
            TAHF+ +   ++    +   +  GSHT+E IA  L T   ++++ T  V +TTD AAN KKA  Q+L  + + GC  H+I+L +R  LE P I++ LAK  K+    H
Sbjct:  212 TAHFLDK-DWNMKTAILGTKKMEGSHTSENIAESLMTTKNEWKLPT--VVVTTDNAANEKKA-FQILKWERF-GCYGHRINLIVRNALEVPEIRKILAKSRKLVTFFH 314          
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: UPI0018D0C22E (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D0C22E)

HSP 1 Score: 59.7 bits (143), Expect = 4.430e-8
Identity = 33/94 (35.11%), Postives = 56/94 (59.57%), Query Frame = 0
Query:    1 MGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMK-QYEIETSVVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIDLALRPVLEE 93
            M +T HFI E        T++  E   +HT+E +A E+  +++ ++ I   ++ +TTD AANIKKA   +L Q+  H CAAH ++L ++  L++
Sbjct:  206 MTLTIHFIHENK--FKTLTLSTREVKDAHTSENLAREMKDILETEWNILDKIICVTTDNAANIKKAVIDIL-QKRHHSCAAHTLNLVVQDTLKD 296          
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: UPI001F8DAAAB (Uncharacterized protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=UPI001F8DAAAB)

HSP 1 Score: 58.9 bits (141), Expect = 7.130e-8
Identity = 32/94 (34.04%), Postives = 56/94 (59.57%), Query Frame = 0
Query:    1 MGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMK-QYEIETSVVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIDLALRPVLEE 93
            M +T HFI +G       T++  E   +HT+E +A E+  + + ++ I   ++ +TTD AANIKKA   +L Q+  H CAAH ++L ++  +++
Sbjct:  212 MTLTIHFIYDGK--FKTLTLSTREIKDTHTSENLAREMKDICETEWNILDKIICVTTDNAANIKKAVIDIL-QKRHHSCAAHTLNLVVQDTIKD 302          
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: UPI001C9C677A (uncharacterized protein LOC122407372 n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9C677A)

HSP 1 Score: 53.9 bits (128), Expect = 4.600e-6
Identity = 30/66 (45.45%), Postives = 38/66 (57.58%), Query Frame = 0
Query:    1 MGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETS-VVAITTDTAANIKKA 65
            +GVTAH+I   +       IAC  FPGSHTAERIA  L  + + + + T  VVA  TD  +N  KA
Sbjct:   47 LGVTAHWIDNATLTRQSFAIACQRFPGSHTAERIAEVLLDINESFGLNTEKVVATVTDNGSNFAKA 112          
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: A0A1A8J3D6_NOTKU (BED-type domain-containing protein (Fragment) n=1 Tax=Nothobranchius kuhntae TaxID=321403 RepID=A0A1A8J3D6_NOTKU)

HSP 1 Score: 53.5 bits (127), Expect = 6.130e-6
Identity = 33/107 (30.84%), Postives = 58/107 (54.21%), Query Frame = 0
Query:    1 MGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIDLALRPVLE-EPSIKQTLAKHNKM 106
            + +  HFI+E S ++T   +    FP +HTA  IA  L T+M+++ I++ ++ + TD AAN+      L   +  H C AH ++L +R  L+  P ++    K  K+
Sbjct:  128 LAINCHFINE-SDELTSMLLTVRSFPENHTAANIAKVLATLMEEWNIQSKLMCLVTDGAANMLACANNL-DARHIH-CIAHALNLVVRKALDLTPGLEDMRGKARKV 231          
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: A0A015J1A6_RHIIW (Uncharacterized protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015J1A6_RHIIW)

HSP 1 Score: 52.0 bits (123), Expect = 6.860e-6
Identity = 27/87 (31.03%), Postives = 48/87 (55.17%), Query Frame = 0
Query:    1 MGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIDLAL 87
            +G+T  +I + + ++   T+  N     HTA+ I   L  +++++ +   V  ITTD AAN+KKA + +    EW GC+ H + L +
Sbjct:   21 IGITCSYI-DSNFNLNEITLTVNYVRYPHTAQHITESLEEILEKWNLRDKVFTITTDNAANMKKAISNM-NAVEWQGCSTHTLQLII 105          
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: UPI001C17C339 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C17C339)

HSP 1 Score: 51.2 bits (121), Expect = 1.260e-5
Identity = 30/91 (32.97%), Postives = 46/91 (50.55%), Query Frame = 0
Query:    1 MGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIDLALRPVL 91
            +GVT  +I +   ++   T+  N     HTA+ +A  L  V  ++ +   V  ITTD AAN+KKA   +     W GC+AH + L +   L
Sbjct:   31 IGVTCSYI-DTKFNLNEITLTVNYVRYLHTAQHVAESLKEVFNEWNLRDKVFTITTDNAANMKKAIASM-SNIRWQGCSAHTLQLIVGKAL 119          
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: UPI001C089F98 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C089F98)

HSP 1 Score: 52.4 bits (124), Expect = 1.610e-5
Identity = 27/65 (41.54%), Postives = 37/65 (56.92%), Query Frame = 0
Query:    1 MGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKA 65
            +GVTAH+I EG+ +     +AC    GSHT + +A  L  +  QY I   VV  TTD+ +N  KA
Sbjct:  212 IGVTAHWIDEGTLERRSAALACKRLKGSHTFDVVAGALDEIHCQYRIRGKVVRTTTDSGSNFIKA 276          
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: UPI000B37A4F4 (zinc finger BED domain-containing protein 1-like n=1 Tax=Helicoverpa armigera TaxID=29058 RepID=UPI000B37A4F4)

HSP 1 Score: 52.0 bits (123), Expect = 2.220e-5
Identity = 29/98 (29.59%), Postives = 58/98 (59.18%), Query Frame = 0
Query:    1 MGVTAHFISEGSADITRCT---IACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQQEWHG--CAAHKIDLALRPVLEE 93
            + VTAH++ + +AD T+     + C E+   HT++ ++  L  +M+++ I+  V+A+T+D AANI    T  + + +W    C AH ++L ++  L++
Sbjct:  211 IAVTAHYL-KSTADTTKLQSNLLGCVEYNDRHTSQNLSEFLKNIMREWNIDHKVIAVTSDNAANI----TAAIREGDWRQIPCFAHTLNLCVQSALQQ 303          
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: UPI001C1AB16C (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1AB16C)

HSP 1 Score: 51.6 bits (122), Expect = 2.970e-5
Identity = 30/91 (32.97%), Postives = 46/91 (50.55%), Query Frame = 0
Query:    1 MGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIDLALRPVL 91
            +GVT  +I +   ++   T+  N     HTA+ +A  L  V  ++ +   V  ITTD AAN+KKA   +     W GC+AH + L +   L
Sbjct:  175 IGVTCSYI-DTKFNLNEITLTVNYVRYPHTAQHVAESLEEVFNEWNLRDKVFTITTDNAANMKKAIASM-SNIRWQGCSAHTLQLIVGKAL 263          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
UPI001E1E1C501.980e-937.96E3 SUMO-protein ligase ZBED1-like n=1 Tax=Mercenar... [more]
UPI0018D0C22E4.430e-835.11E3 SUMO-protein ligase ZBED1-like n=1 Tax=Plutella... [more]
UPI001F8DAAAB7.130e-834.04Uncharacterized protein n=1 Tax=Spodoptera exigua ... [more]
UPI001C9C677A4.600e-645.45uncharacterized protein LOC122407372 n=1 Tax=Ventu... [more]
A0A1A8J3D6_NOTKU6.130e-630.84BED-type domain-containing protein (Fragment) n=1 ... [more]
A0A015J1A6_RHIIW6.860e-631.03Uncharacterized protein n=1 Tax=Rhizophagus irregu... [more]
UPI001C17C3391.260e-532.97Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]
UPI001C089F981.610e-541.54E3 SUMO-protein ligase ZBED1-like n=1 Tax=Alosa sa... [more]
UPI000B37A4F42.220e-529.59zinc finger BED domain-containing protein 1-like n... [more]
UPI001C1AB16C2.970e-532.97Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007021Domain of unknown function DUF659PFAMPF04937DUF659coord: 28..104
e-value: 1.5E-8
score: 34.6
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig164905contigH-elongata_contig164905:1079..1411 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig164905.4091.1mRNA_H-elongata_contig164905.4091.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig164905 1079..1420 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig164905.4091.1 ID=prot_H-elongata_contig164905.4091.1|Name=mRNA_H-elongata_contig164905.4091.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=111bp
MGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETS
VVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIDLALRPVLEEPSIKQTL
AKHNKMTKHVH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007021DUF659
IPR012337RNaseH-like_sf