prot_H-elongata_contig16483.4086.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16483.4086.1
Unique Nameprot_H-elongata_contig16483.4086.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length48
Homology
BLAST of mRNA_H-elongata_contig16483.4086.1 vs. uniprot
Match: UPI0017B775E6 (NADAR family protein n=1 Tax=Nocardia sp. TaxID=1821 RepID=UPI0017B775E6)

HSP 1 Score: 60.8 bits (146), Expect = 4.580e-10
Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    1 MRQLLLNTGQCCLAKPSPHDTLWGTGLSACDYRAAFPATWRGSNLLG 47
            +R+ L+NTG   L + SP D +WG GL+A D RAA PA WRGSNLLG
Sbjct:  125 LRRFLVNTGDRVLVEASPMDRIWGIGLAADDPRAADPAQWRGSNLLG 171          
BLAST of mRNA_H-elongata_contig16483.4086.1 vs. uniprot
Match: UPI00078636B5 (NADAR family protein n=1 Tax=Herbidospora sakaeratensis TaxID=564415 RepID=UPI00078636B5)

HSP 1 Score: 59.3 bits (142), Expect = 1.580e-9
Identity = 27/47 (57.45%), Postives = 31/47 (65.96%), Query Frame = 0
Query:    1 MRQLLLNTGQCCLAKPSPHDTLWGTGLSACDYRAAFPATWRGSNLLG 47
            +R  LL T    L + SPHD +WG GL+A D RAA P TWRG NLLG
Sbjct:  126 LRDYLLGTRDRVLVEASPHDRVWGIGLTASDERAASPTTWRGLNLLG 172          
BLAST of mRNA_H-elongata_contig16483.4086.1 vs. uniprot
Match: UPI0006288B23 (NADAR family protein n=1 Tax=Streptomyces humi TaxID=1428620 RepID=UPI0006288B23)

HSP 1 Score: 58.5 bits (140), Expect = 3.430e-9
Identity = 28/47 (59.57%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    1 MRQLLLNTGQCCLAKPSPHDTLWGTGLSACDYRAAFPATWRGSNLLG 47
            +R  LL TG   L + SP D +WG GL+A D RAA PA WRGSNLLG
Sbjct:  126 LRDFLLATGDRVLVEASPMDRVWGIGLTADDERAADPARWRGSNLLG 172          
BLAST of mRNA_H-elongata_contig16483.4086.1 vs. uniprot
Match: A0A1G8WRD4_9ACTN (NADAR domain-containing protein n=2 Tax=Nonomuraea maritima TaxID=683260 RepID=A0A1G8WRD4_9ACTN)

HSP 1 Score: 58.9 bits (141), Expect = 4.530e-9
Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    5 LLNTGQCCLAKPSPHDTLWGTGLSACDYRAAFPATWRGSNLLG 47
            LL+TG   L + SPHD +WG GLSA D RAA P TW+G NLLG
Sbjct:  185 LLSTGDRVLVEASPHDRVWGIGLSAGDDRAASPTTWQGLNLLG 227          
BLAST of mRNA_H-elongata_contig16483.4086.1 vs. uniprot
Match: UPI001CD9AEA9 (NADAR family protein n=1 Tax=Nonomuraea sp. NEAU-L178 TaxID=2878562 RepID=UPI001CD9AEA9)

HSP 1 Score: 58.2 bits (139), Expect = 5.060e-9
Identity = 27/43 (62.79%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    5 LLNTGQCCLAKPSPHDTLWGTGLSACDYRAAFPATWRGSNLLG 47
            LL T    L + SPHD +WG GL+A D RAA PATWRG NLLG
Sbjct:  137 LLGTRNRVLVEASPHDRIWGIGLTADDERAASPATWRGLNLLG 179          
BLAST of mRNA_H-elongata_contig16483.4086.1 vs. uniprot
Match: A0A852UTY6_9ACTN (NADAR domain-containing protein n=3 Tax=Streptosporangium TaxID=2000 RepID=A0A852UTY6_9ACTN)

HSP 1 Score: 57.0 bits (136), Expect = 1.480e-8
Identity = 27/47 (57.45%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    1 MRQLLLNTGQCCLAKPSPHDTLWGTGLSACDYRAAFPATWRGSNLLG 47
            +R+ LL T    L + SP D +WG GL+A D RAA PA WRGSNLLG
Sbjct:  127 LREFLLGTRGRVLVEASPVDRIWGIGLAADDARAASPAAWRGSNLLG 173          
BLAST of mRNA_H-elongata_contig16483.4086.1 vs. uniprot
Match: A0A5D0N7W7_9ACTN (NADAR family protein n=2 Tax=Micromonospora sp. AP08 TaxID=2604467 RepID=A0A5D0N7W7_9ACTN)

HSP 1 Score: 55.8 bits (133), Expect = 3.890e-8
Identity = 26/45 (57.78%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    3 QLLLNTGQCCLAKPSPHDTLWGTGLSACDYRAAFPATWRGSNLLG 47
            + LL TG+  L + SP D +WG GL+A D RAA PA WRG+NLLG
Sbjct:  137 RFLLGTGERVLVEASPLDRVWGIGLAADDPRAADPARWRGTNLLG 181          
BLAST of mRNA_H-elongata_contig16483.4086.1 vs. uniprot
Match: A0A7W8Z9W6_9ACTN (NADAR domain-containing protein n=4 Tax=Sphaerisporangium TaxID=321315 RepID=A0A7W8Z9W6_9ACTN)

HSP 1 Score: 55.1 bits (131), Expect = 7.000e-8
Identity = 25/47 (53.19%), Postives = 31/47 (65.96%), Query Frame = 0
Query:    1 MRQLLLNTGQCCLAKPSPHDTLWGTGLSACDYRAAFPATWRGSNLLG 47
            +R+ LL T    L + SPHD +WG GL+A D RAA  A W+G NLLG
Sbjct:  130 LREFLLGTRDHVLVEASPHDRVWGIGLTASDERAASAADWQGLNLLG 176          
BLAST of mRNA_H-elongata_contig16483.4086.1 vs. uniprot
Match: A0A8J3NEF6_9ACTN (NADAR domain-containing protein n=2 Tax=Actinocatenispora rupis TaxID=519421 RepID=A0A8J3NEF6_9ACTN)

HSP 1 Score: 55.1 bits (131), Expect = 1.020e-7
Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    1 MRQLLLNTGQCCLAKPSPHDTLWGTGLSACDYRAAFPATWRGSNLLG 47
            +R+ LL T    L + SP D +WG GL+A D RAA PA WRG+NLLG
Sbjct:  168 LREYLLATRGRVLVEASPRDRVWGIGLAATDPRAADPARWRGTNLLG 214          
BLAST of mRNA_H-elongata_contig16483.4086.1 vs. uniprot
Match: UPI0019428188 (NADAR family protein n=1 Tax=Actinoplanes siamensis TaxID=1223317 RepID=UPI0019428188)

HSP 1 Score: 52.8 bits (125), Expect = 5.110e-7
Identity = 25/43 (58.14%), Postives = 28/43 (65.12%), Query Frame = 0
Query:    5 LLNTGQCCLAKPSPHDTLWGTGLSACDYRAAFPATWRGSNLLG 47
            L  TG   L + SP D +WG GL+  D RAA PA WRGSNLLG
Sbjct:  131 LAGTGHRVLVEASPTDRIWGIGLTRDDPRAADPARWRGSNLLG 173          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16483.4086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
UPI0017B775E64.580e-1059.57NADAR family protein n=1 Tax=Nocardia sp. TaxID=18... [more]
UPI00078636B51.580e-957.45NADAR family protein n=1 Tax=Herbidospora sakaerat... [more]
UPI0006288B233.430e-959.57NADAR family protein n=1 Tax=Streptomyces humi Tax... [more]
A0A1G8WRD4_9ACTN4.530e-962.79NADAR domain-containing protein n=2 Tax=Nonomuraea... [more]
UPI001CD9AEA95.060e-962.79NADAR family protein n=1 Tax=Nonomuraea sp. NEAU-L... [more]
A0A852UTY6_9ACTN1.480e-857.45NADAR domain-containing protein n=3 Tax=Streptospo... [more]
A0A5D0N7W7_9ACTN3.890e-857.78NADAR family protein n=2 Tax=Micromonospora sp. AP... [more]
A0A7W8Z9W6_9ACTN7.000e-853.19NADAR domain-containing protein n=4 Tax=Sphaerispo... [more]
A0A8J3NEF6_9ACTN1.020e-755.32NADAR domain-containing protein n=2 Tax=Actinocate... [more]
UPI00194281885.110e-758.14NADAR family protein n=1 Tax=Actinoplanes siamensi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012816NADARPFAMPF08719DUF1768coord: 1..47
e-value: 3.6E-9
score: 37.0
IPR037238YbiA-like superfamilyGENE3D1.10.357.40coord: 1..47
e-value: 1.3E-6
score: 29.9
IPR037238YbiA-like superfamilySUPERFAMILY143990YbiA-likecoord: 1..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16483contigH-elongata_contig16483:526..669 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16483.4086.1mRNA_H-elongata_contig16483.4086.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16483 340..669 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16483.4086.1 ID=prot_H-elongata_contig16483.4086.1|Name=mRNA_H-elongata_contig16483.4086.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=48bp
MRQLLLNTGQCCLAKPSPHDTLWGTGLSACDYRAAFPATWRGSNLLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012816NADAR
IPR037238YbiA-like_sf