prot_H-elongata_contig164645.4077.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig164645.4077.1
Unique Nameprot_H-elongata_contig164645.4077.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length116
Homology
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BLAST of mRNA_H-elongata_contig164645.4077.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 7.550e-6
Identity = 28/68 (41.18%), Postives = 42/68 (61.76%), Query Frame = 0 
Query:   29 EQVNKSELFPEVETAVEVYREVMEEKDLGRALNPTERISVFLDPRRKIISENDCIGGGNALQTMAISD 96
            E+   + L  E +  V+V RE+M+EK +G+AL   ER+SV LDPRRK + +     G + L+T A +D
Sbjct:  362 EETQVTGLTLEAQDVVQVLREMMDEKGVGKALQRVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEAD 429
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig164645.4077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JQI6_9PHAE7.550e-641.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig164645contigH-elongata_contig164645:551..1105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig164645.4077.1mRNA_H-elongata_contig164645.4077.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig164645 510..1311 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig164645.4077.1 ID=prot_H-elongata_contig164645.4077.1|Name=mRNA_H-elongata_contig164645.4077.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=116bp
MKELMEIMNTECLQIRVPDKPGMNPVPYEQVNKSELFPEVETAVEVYREV
MEEKDLGRALNPTERISVFLDPRRKIISENDCIGGGNALQTMAISDGEGG
GTAYNSPRRPSTRTN*
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