prot_H-elongata_contig164297.4062.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig164297.4062.1
Unique Nameprot_H-elongata_contig164297.4062.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length62
Homology
BLAST of mRNA_H-elongata_contig164297.4062.1 vs. uniprot
Match: D8LU82_ECTSI (Conserved C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU82_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 6.070e-20
Identity = 38/57 (66.67%), Postives = 44/57 (77.19%), Query Frame = 0
Query:    5 SRQFTCHHCNRGFSTKGNLSRHIQATHVGG-KTFPCPTCGKEFKRKEDRNTHLRIHT 60
            S+QF C  C+R FSTKGN  RH QATH+ G KT+PC  CGKEFKRKEDR  H+R+HT
Sbjct:   71 SKQFKCSFCDRLFSTKGNKVRHEQATHLQGVKTYPCEVCGKEFKRKEDRTMHMRVHT 127          
BLAST of mRNA_H-elongata_contig164297.4062.1 vs. uniprot
Match: A0A6H5L0P6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0P6_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 3.750e-19
Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    5 SRQFTCHHCNRGFSTKGNLSRHIQATHVGG-KTFPCPTCGKEFKRKEDRNTHLRIHTG 61
            S+QF C  C+  FSTKGN  RH QATH+ G +T+PC  CGKEFKRKEDR  H+R+HTG
Sbjct:   67 SKQFKCSFCDILFSTKGNKVRHEQATHLHGVRTYPCEVCGKEFKRKEDRTMHMRVHTG 124          
BLAST of mRNA_H-elongata_contig164297.4062.1 vs. uniprot
Match: A0A7D9HLY0_PARCT (Zinc finger and SCAN domain-containing 22 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HLY0_PARCT)

HSP 1 Score: 58.2 bits (139), Expect = 2.420e-8
Identity = 22/50 (44.00%), Postives = 31/50 (62.00%), Query Frame = 0
Query:   10 CHHCNRGFSTKGNLSRHIQATHVGGKTFPCPTCGKEFKRKEDRNTHLRIH 59
            C+HC + F+ + +L RHIQ+ H G K+F C  C K F  K+  N H +IH
Sbjct:   60 CNHCEKVFTRRADLKRHIQSLHFGEKSFTCDQCDKSFATKDKLNRHKKIH 109          
BLAST of mRNA_H-elongata_contig164297.4062.1 vs. uniprot
Match: A0A8J1T8S4_OWEFU (Ofus.G012959 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1T8S4_OWEFU)

HSP 1 Score: 57.4 bits (137), Expect = 4.510e-8
Identity = 26/57 (45.61%), Postives = 32/57 (56.14%), Query Frame = 0
Query:    4 LSRQFTCHHCNRGFSTKGNLSRHIQATHVGGKTFPCPTCGKEFKRKEDRNTHLRIHT 60
            LS Q  C HC + FS +GNL +HI+A H+G + F C  CGK F  K     H   HT
Sbjct:  708 LSNQ--CQHCQKMFSQRGNLEKHIRAVHLGARPFECDICGKAFGYKHAMIKHKVCHT 762          
BLAST of mRNA_H-elongata_contig164297.4062.1 vs. uniprot
Match: A0A6S7K0F4_PARCT (Zinc finger and SCAN domain-containing 22 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7K0F4_PARCT)

HSP 1 Score: 57.0 bits (136), Expect = 6.160e-8
Identity = 22/50 (44.00%), Postives = 30/50 (60.00%), Query Frame = 0
Query:   10 CHHCNRGFSTKGNLSRHIQATHVGGKTFPCPTCGKEFKRKEDRNTHLRIH 59
            C HC + F+ + +L RHIQ+ H G K+F C  C K F  K+  N H +IH
Sbjct:   60 CGHCEKVFTRRADLKRHIQSLHFGEKSFTCDQCDKSFATKDKLNRHKKIH 109          
BLAST of mRNA_H-elongata_contig164297.4062.1 vs. uniprot
Match: A0A8J1TG50_OWEFU (Ofus.G031601 protein n=2 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TG50_OWEFU)

HSP 1 Score: 55.8 bits (133), Expect = 1.550e-7
Identity = 25/64 (39.06%), Postives = 34/64 (53.12%), Query Frame = 0
Query:    3 TLSRQFTCHHCNRGFSTKGNLSRHIQATHVGGK----TFPCPTCGKEFKRKEDRNTHLRIHTGE 62
            T  + FTC HC + FS KGN+ +H++A H   +    ++PC  C K F        H R HTGE
Sbjct:  303 TGEKPFTCAHCQKDFSDKGNMLKHVRAKHDNNQLNIPSYPCSECWKSFPSVYALERHKRSHTGE 366          
BLAST of mRNA_H-elongata_contig164297.4062.1 vs. uniprot
Match: A0A7D9M683_PARCT (Gastrula zinc finger -like n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M683_PARCT)

HSP 1 Score: 54.3 bits (129), Expect = 2.350e-7
Identity = 21/50 (42.00%), Postives = 29/50 (58.00%), Query Frame = 0
Query:   10 CHHCNRGFSTKGNLSRHIQATHVGGKTFPCPTCGKEFKRKEDRNTHLRIH 59
            C HC + F+ + +L RHIQ+ H G K+F C  C K F  K+  N   +IH
Sbjct:   60 CDHCEKVFTRRADLKRHIQSLHFGEKSFTCDQCDKSFATKDKLNRQKKIH 109          
BLAST of mRNA_H-elongata_contig164297.4062.1 vs. uniprot
Match: UPI0008521E5F (zinc finger protein 28-like n=1 Tax=Cyphomyrmex costatus TaxID=456900 RepID=UPI0008521E5F)

HSP 1 Score: 54.7 bits (130), Expect = 3.870e-7
Identity = 28/73 (38.36%), Postives = 34/73 (46.58%), Query Frame = 0
Query:    3 TLSRQFTCHHCNRGFSTKGNLSRHIQATH-------------VGGKTFPCPTCGKEFKRKEDRNTHLRIHTGE 62
            T  + + C  C     TKGNL  H+ A H             +GG ++ C TC KEFK     N H RIHTGE
Sbjct:   47 TGEKPYQCEFCKYKSRTKGNLKEHMVAKHNNDERFKSNKDLYIGGVSYKCGTCNKEFKYITHLNRHQRIHTGE 119          
BLAST of mRNA_H-elongata_contig164297.4062.1 vs. uniprot
Match: A0A151ICA1_9HYME (Uncharacterized protein n=1 Tax=Cyphomyrmex costatus TaxID=456900 RepID=A0A151ICA1_9HYME)

HSP 1 Score: 54.7 bits (130), Expect = 4.030e-7
Identity = 28/73 (38.36%), Postives = 34/73 (46.58%), Query Frame = 0
Query:    3 TLSRQFTCHHCNRGFSTKGNLSRHIQATH-------------VGGKTFPCPTCGKEFKRKEDRNTHLRIHTGE 62
            T  + + C  C     TKGNL  H+ A H             +GG ++ C TC KEFK     N H RIHTGE
Sbjct:  834 TGEKPYQCEFCKYKSRTKGNLKEHMVAKHNNDERFKSNKDLYIGGVSYKCGTCNKEFKYITHLNRHQRIHTGE 906          
BLAST of mRNA_H-elongata_contig164297.4062.1 vs. uniprot
Match: A0A1R2BYI4_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BYI4_9CILI)

HSP 1 Score: 53.1 bits (126), Expect = 4.390e-7
Identity = 24/64 (37.50%), Postives = 35/64 (54.69%), Query Frame = 0
Query:    1 MSTLSRQFTCH--HCNRGFSTKGNLSRHIQATHVGGKTFPCPTCGKEFKRKEDRNTHLRIHTGE 62
            MST      C+  +C++ +STK NL RH++  H   K F C  CGK    K++ N H+  H+ E
Sbjct:    1 MSTRKLPLKCNFTNCDKEYSTKYNLKRHLETVHSNLKRFRCRLCGKNLSSKQNLNEHIFTHSNE 64          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig164297.4062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU82_ECTSI6.070e-2066.67Conserved C2H2 zinc finger protein n=1 Tax=Ectocar... [more]
A0A6H5L0P6_9PHAE3.750e-1963.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7D9HLY0_PARCT2.420e-844.00Zinc finger and SCAN domain-containing 22 n=1 Tax=... [more]
A0A8J1T8S4_OWEFU4.510e-845.61Ofus.G012959 protein n=1 Tax=Owenia fusiformis Tax... [more]
A0A6S7K0F4_PARCT6.160e-844.00Zinc finger and SCAN domain-containing 22 n=1 Tax=... [more]
A0A8J1TG50_OWEFU1.550e-739.06Ofus.G031601 protein n=2 Tax=Owenia fusiformis Tax... [more]
A0A7D9M683_PARCT2.350e-742.00Gastrula zinc finger -like n=2 Tax=Paramuricea cla... [more]
UPI0008521E5F3.870e-738.36zinc finger protein 28-like n=1 Tax=Cyphomyrmex co... [more]
A0A151ICA1_9HYME4.030e-738.36Uncharacterized protein n=1 Tax=Cyphomyrmex costat... [more]
A0A1R2BYI4_9CILI4.390e-737.50Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 8..31
e-value: 3.9E-4
score: 29.8
coord: 37..59
e-value: 0.0015
score: 27.8
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 37..59
e-value: 4.3E-6
score: 26.9
coord: 8..31
e-value: 2.2E-6
score: 27.8
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 10..31
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 39..59
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 8..36
score: 13.027
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 37..62
score: 14.191
NoneNo IPR availableGENE3D3.30.160.60coord: 6..29
e-value: 1.0E-7
score: 33.5
NoneNo IPR availableGENE3D3.30.160.60coord: 30..62
e-value: 2.3E-11
score: 45.5
NoneNo IPR availablePANTHERPTHR24404ZINC FINGER PROTEINcoord: 6..62
NoneNo IPR availablePANTHERPTHR24404:SF49KLUMPFUSS RELATEDcoord: 6..62
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 6..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig164297contigH-elongata_contig164297:478..663 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig164297.4062.1mRNA_H-elongata_contig164297.4062.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig164297 478..663 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig164297.4062.1 ID=prot_H-elongata_contig164297.4062.1|Name=mRNA_H-elongata_contig164297.4062.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=62bp
MSTLSRQFTCHHCNRGFSTKGNLSRHIQATHVGGKTFPCPTCGKEFKRKE
DRNTHLRIHTGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf