prot_H-elongata_contig164150.4054.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig164150.4054.1
Unique Nameprot_H-elongata_contig164150.4054.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length124
Homology
BLAST of mRNA_H-elongata_contig164150.4054.1 vs. uniprot
Match: UPI00103FEA55 (uncharacterized protein LOC114361313 n=2 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103FEA55)

HSP 1 Score: 54.3 bits (129), Expect = 4.540e-6
Identity = 32/117 (27.35%), Postives = 58/117 (49.57%), Query Frame = 0
Query:    2 VQGAESPGEAWSKLVQHYHASGLKERRRLTVDFYTMKMELGEHPRKFLQRVDKMVKELERVGRPVDPKDVDIVILSGLTPQYDTEVRMLESSSDWPTRDWIERAVINQFDRLESERE 118
            ++ A+S  EAW+ L + Y   GL  R  L    +  K+        +L ++ ++  +L  +  P+D + V ++ILSGLT  YD  +  +E SS   + + I   ++ +  R E + E
Sbjct:   71 IRTAKSAHEAWTILQKTYEGRGLSRRLGLLRSLFNTKLSECSSMEVYLNKIKEISHQLSEIESPLDDELVAVIILSGLTDDYDPLIMAIEHSSSKLSTEVISTKLLQETQRREEKTE 187          
BLAST of mRNA_H-elongata_contig164150.4054.1 vs. uniprot
Match: A0A2A4K3A2_HELVI (CCHC-type domain-containing protein n=1 Tax=Heliothis virescens TaxID=7102 RepID=A0A2A4K3A2_HELVI)

HSP 1 Score: 53.1 bits (126), Expect = 1.240e-5
Identity = 32/118 (27.12%), Postives = 62/118 (52.54%), Query Frame = 0
Query:    2 VQGAESPGEAWSKLVQHYHASGLKERRRLTVDFYTMKMELGEHPRKFLQRVDKMVKELERVGRPVDPKDVDIVILSGLTPQYDTEVRMLESSSDWPTRDWIERAVINQFDRLESEREI 119
            V+ A++  EAW  L + +   GL  R  L    +  K+        +L ++  + ++L  +G P+D + V +++LSGLT  +D  +  LE+S+     D ++  ++ +F R E E+E+
Sbjct:   74 VRNAKTAFEAWHNLQRAFEDKGLCRRLSLLRSLFGTKLGENTSMEGYLSKITNLSQQLSDIGFPLDDEFVAVLMLSGLTSDFDPLIMALENSNTKLHSDTVKGKLLQEFQRRE-EKEV 190          
BLAST of mRNA_H-elongata_contig164150.4054.1 vs. uniprot
Match: UPI001F8D56D1 (Uncharacterized protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=UPI001F8D56D1)

HSP 1 Score: 53.1 bits (126), Expect = 1.290e-5
Identity = 28/117 (23.93%), Postives = 59/117 (50.43%), Query Frame = 0
Query:    2 VQGAESPGEAWSKLVQHYHASGLKERRRLTVDFYTMKMELGEHPRKFLQRVDKMVKELERVGRPVDPKDVDIVILSGLTPQYDTEVRMLESSSDWPTRDWIERAVINQFDRLESERE 118
            ++ A+S  EAW+ L + Y   GL  +  L    +  K+        +L ++ ++  +L  +  P+D + + ++ILSGLT  YD  +  +E+S    T + +   ++ +  R E +++
Sbjct:   69 IRTAKSAYEAWNNLKKTYEGKGLCRKLGLLRSLFGTKLADSNSMDGYLNKIKEVAHQLSEIESPLDDEFIAVIILSGLTSDYDPLIMAIENSGQKLTTEHVSAKLLQETQRREDKQD 185          
BLAST of mRNA_H-elongata_contig164150.4054.1 vs. uniprot
Match: UPI00103F0D66 (uncharacterized protein LOC114362197 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103F0D66)

HSP 1 Score: 51.2 bits (121), Expect = 2.320e-5
Identity = 28/93 (30.11%), Postives = 48/93 (51.61%), Query Frame = 0
Query:    2 VQGAESPGEAWSKLVQHYHASGLKERRRLTVDFYTMKMELGEHPRKFLQRVDKMVKELERVGRPVDPKDVDIVILSGLTPQYDTEVRMLESSS 94
            ++ A+S  EAW+ L + Y   GL  R  L    +  K+        +L ++ ++  +L  +  P+D + V ++ILSGLT  YD  +  +E SS
Sbjct:   71 IRTAKSAHEAWTILQKTYEGRGLSRRLGLLRSLFNTKLSECSSMEVYLNKIKEISHQLSEIESPLDDELVAVIILSGLTDDYDPLIMAIEHSS 163          
BLAST of mRNA_H-elongata_contig164150.4054.1 vs. uniprot
Match: A0A2H1VB05_SPOFR (SFRICE_041671 (Fragment) n=1 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A2H1VB05_SPOFR)

HSP 1 Score: 50.4 bits (119), Expect = 2.770e-5
Identity = 26/93 (27.96%), Postives = 48/93 (51.61%), Query Frame = 0
Query:    2 VQGAESPGEAWSKLVQHYHASGLKERRRLTVDFYTMKMELGEHPRKFLQRVDKMVKELERVGRPVDPKDVDIVILSGLTPQYDTEVRMLESSS 94
            ++ A+S  EAW  L + Y   GL  R  L    ++ K+        +L ++ ++  +L  +  P+D + V +++LSGLT  YD  +  +E S+
Sbjct:   43 IRTAKSAHEAWKILQKAYEGRGLSRRLGLLRSLFSTKLSENSSMEVYLNKIKEISHQLNEIESPLDDEFVAVIMLSGLTDDYDPLIMAIEHST 135          
BLAST of mRNA_H-elongata_contig164150.4054.1 vs. uniprot
Match: A0A2H1WMK4_SPOFR (SFRICE_021333 n=1 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A2H1WMK4_SPOFR)

HSP 1 Score: 51.6 bits (122), Expect = 3.690e-5
Identity = 28/113 (24.78%), Postives = 56/113 (49.56%), Query Frame = 0
Query:    2 VQGAESPGEAWSKLVQHYHASGLKERRRLTVDFYTMKMELGEHPRKFLQRVDKMVKELERVGRPVDPKDVDIVILSGLTPQYDTEVRMLESSSDWPTRDWIERAVINQFDRLE 114
            ++ A+S  EAW  L + Y   GL  R  L    +  K+        +L ++ ++  +L  +  P+D + V +++LSGLT  YD  +  +E S+   + + I + ++ +  + E
Sbjct:   74 IRTAKSAHEAWKILQKAYEGRGLSRRLGLLRSLFNTKLSENSSMEVYLNKIKEISHQLNEIESPLDDEFVAVIMLSGLTDDYDPLIMAIEHSTSKLSTEIISQKLLQETQKRE 186          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig164150.4054.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
UPI00103FEA554.540e-627.35uncharacterized protein LOC114361313 n=2 Tax=Ostri... [more]
A0A2A4K3A2_HELVI1.240e-527.12CCHC-type domain-containing protein n=1 Tax=Heliot... [more]
UPI001F8D56D11.290e-523.93Uncharacterized protein n=1 Tax=Spodoptera exigua ... [more]
UPI00103F0D662.320e-530.11uncharacterized protein LOC114362197 n=1 Tax=Ostri... [more]
A0A2H1VB05_SPOFR2.770e-527.96SFRICE_041671 (Fragment) n=1 Tax=Spodoptera frugip... [more]
A0A2H1WMK4_SPOFR3.690e-524.78SFRICE_021333 n=1 Tax=Spodoptera frugiperda TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 2..113
e-value: 1.0E-16
score: 60.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig164150contigH-elongata_contig164150:617..988 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig164150.4054.1mRNA_H-elongata_contig164150.4054.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig164150 617..988 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig164150.4054.1 ID=prot_H-elongata_contig164150.4054.1|Name=mRNA_H-elongata_contig164150.4054.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=124bp
IVQGAESPGEAWSKLVQHYHASGLKERRRLTVDFYTMKMELGEHPRKFLQ
RVDKMVKELERVGRPVDPKDVDIVILSGLTPQYDTEVRMLESSSDWPTRD
WIERAVINQFDRLESEREIEDVE*
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