prot_H-elongata_contig164.4046.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig164.4046.1
Unique Nameprot_H-elongata_contig164.4046.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1294
Homology
BLAST of mRNA_H-elongata_contig164.4046.1 vs. uniprot
Match: D7FND3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FND3_ECTSI)

HSP 1 Score: 843 bits (2179), Expect = 1.020e-282
Identity = 601/1233 (48.74%), Postives = 711/1233 (57.66%), Query Frame = 0
Query:  137 MLPLQLALAPAKRAGGGGNST-GMAGNEGKRGVGVTRMPAAVREKALMCVTTAVRASGSRFVEGYGVKPTTKILIDLVFTMSECSPTSGSISTSTAHPKRAPLRGIASGRGGHDCEKTVGRDDRGSGSGLSAGTDALRMACLECLEALFRAPFDPASSYLTMSSGSGADASAWSEVRGVLRDAFKGGIMAQLVQELLLCCCQGDGKRSSGISSKSAAT-GVTARQGAGES-----WGGLKTARLAARCLDALCSFAPGASTWRRFLPGTFSGLFRAIRGQEVDSGGRGSVGAVQTSTPPLVSISLAVSTTAVAARREGLRRGLRGGASKSVLAETCLAVLKKVLLMCTGDVPNPSVDASSNLARLARPSTPPHALVTDGADSGGKGHTNQANENPLLVLQRLARTSNARAASGAG-----GTSGRPKRLSDHLGTPST---PTAANAATS---------------------------EDSEWETQAGGRLRAFIPPLLAFCRLHPGWRVRRASAAFASALLVGSGGGGCYGGEEVDWLANGTRLGGEDSAPKEGLLGPLIPSLMEALVGLVMDDMPQVSAAAHEGLDHFRATLSPLRWLSLRGLLLERLCTIVEGLPAVAKSADERRLRVAFDLLAGYLSLLRFDARAALDARLPTVLSCLCEALEFDQNFNVQVLEGSHDALARAEIGRGRHDGVSPEGTESDGGVGGHRGGGPGRAIPKYYRRVLANVREDATVASAKRAVRFLGTYCDLASVADAILSSLETPYPMP--RPRSRRSSRQPSVGADAAGSTPPLAGAMSDHPQAQWQQQRQRIALATSGSDYPYAGGSDGGDGGLYRRRCLEWLRPRLPMAWVLNQALLGRVPGVTANERNGAGVGRGEGSAAEAC----------LGRGLAVDVVERLVASRAFALPVTRAEATAAGDYPGDDSGSGTFDEFPGHQALLPDRPRA------------RDSTGYTRSGELLG--GERGYRVP--GLSSQVLDANATLVGTVMEALASLAEASGAEFGEAFLRRALYPLLEKAASAHPVVSQAAFATLWRVRLACGKFDDMSQLLEVNMDYVVDDIIRRVAACRTSARLHRRANGGAVTSYGSGHTDGGAGSGASVPGVVEAVLRIGGSAMGPALVRDLAGVTFREVDACAWDPRQTRRSLGVLRAVASCVSVPSL---SNGERFRHAGVFSGAAEDKASRDAAAS------SALFKSPWFR 1290
            MLPL+LALAP  R   GG  T G+ G +         +PA  REKA +CV  AVRASGSRFVEGYGVKPT  ++I LVFT+S CSP SG +   ++     P   + +G GG      VG      GSGL+AGTDALR++CL+CLEA+ RAPF   +     SS SG++ S WSEVR  L+DA  GGI+AQLVQEL                        V A  G+G S     WGG + AR AA CL+ALCSF PG++ WRR LPGTFSGLFR IRG      GR   G             + + ++A     +G RRG     SKS LAE              GD  + +V + +     +R ST                     + +PLL LQRLA TSNA A +        GT+        H G  S    P     A +                           E+ EWE +   RLR  +PPLLAFC LHPGWRVRRA+A  AS LL   GGG           A+G   G      K GLL PL P LMEALVGL++D MPQVSA A  GLD FRATLSP RWL LRG+LLERLCTI EGLPA+AKSADE+RLR AFDLLAGYLSLLRFDARAALD RL  VLSCLCE LEFD++FNVQ LEGS    + +  G    + +SP  T  DGG    R   P R  PKYYR+V ANVRED+T++SA+RAVR LG +CDL S+ADA +SSLET  P P                   A +TP  A A+       W         +   S +   GG+   +  +YRRRCL+WLR RLP+AWVLNQALLGR  G  A E      G GEG+ A             LGRGLA+ ++ERL+AS  F LPV+RAEA AAG Y G     G  D     ++LL     A            R S  YTRSG++LG  G+ G R    G+S QVLDANATLV TV+EAL SLAEASG   GEAFLRRALYPLLEKAAS HPVVSQ+A ATL RVR+ACG F+D SQLLE NMDYVVDD++RRV++   S+R  R  +GG+    G G   GG  +G+ +PGVVEAVLRIGGSAMGPALVRDLAGVT REVDACAWDPRQTRRSLGVLRAVASCV++P L    N E+F ++GV     +DK   D   +      SAL +SPWFR
Sbjct:    1 MLPLELALAPPDRRNAGGRKTSGLGGGQSPE------VPAGAREKAFLCVAEAVRASGSRFVEGYGVKPTIHVMIRLVFTLSGCSPASGGVPAGSSSGSAVP-GAVRNGTGG------VG------GSGLTAGTDALRLSCLKCLEAVLRAPF---ACDWHHSSSSGSNDSLWSEVRNDLKDAMGGGILAQLVQELXXXXXXXXXXXXXXXXXXXXXXRAVAASPGSGGSGRDRVWGGAEEARAAAGCLEALCSFTPGSAVWRRLLPGTFSGLFRTIRGIH---SGRDVAG------------GMVLPSSAAQLGGDGRRRG---SGSKSALAEA-------------GDGIDEAVQSGTGGQPQSRSST---------------------DSDPLLALQRLAVTSNASARNPGNPAQPAGTASAAASPEGHHGRASPSPDPXXXXGAFAXXXXXXXXXXXXXXXXXXXXXXTVIAVENPEWEARTSDRLRLLLPPLLAFCCLHPGWRVRRATAKLASDLLRAGGGG--------HEAASGGEAGRGSGEGKGGLLEPLTPLLMEALVGLLLDSMPQVSAEARRGLDSFRATLSPFRWLELRGILLERLCTIAEGLPAMAKSADEKRLRGAFDLLAGYLSLLRFDARAALDGRLSLVLSCLCETLEFDEDFNVQALEGS----SASSSGNLSSENISPSDTAQDGGPEACR---PNR--PKYYRQVFANVREDSTLSSARRAVRLLGKFCDLPSLADASISSLETRSPRPPXXXXXXXXXXXXXXXXXPAAATPETAVAIGP-----W---------SDRSSAFREDGGNSSSNDAIYRRRCLKWLRLRLPLAWVLNQALLGRGSGSAAGEEAXXXXG-GEGAEARKSNVTGEDEGMFLGRGLAISMLERLLASHTFNLPVSRAEAAAAG-YSGSYGNVGAADFE--RESLLTSGANAGEGERGDVAALARRSVEYTRSGQVLGVGGDGGARSRSRGVSGQVLDANATLVSTVVEALGSLAEASGPGCGEAFLRRALYPLLEKAASTHPVVSQSALATLARVRVACGDFEDTSQLLEANMDYVVDDVVRRVSS---SSRRSRNMDGGSTMITGGGR--GGTSAGSGIPGVVEAVLRIGGSAMGPALVRDLAGVTLREVDACAWDPRQTRRSLGVLRAVASCVTLPPLPPPENSEKFPNSGVDQHDKDDKEEEDLQGTTERNGESALAESPWFR 1119          
BLAST of mRNA_H-elongata_contig164.4046.1 vs. uniprot
Match: A0A6H5KT26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT26_9PHAE)

HSP 1 Score: 775 bits (2002), Expect = 8.740e-251
Identity = 589/1293 (45.55%), Postives = 689/1293 (53.29%), Query Frame = 0
Query:  137 MLPLQLALAPAKRAGGGGNSTGMAGNEGKRGVGVTRMPAAVREKALMCVTTAVRASGSRFVEGYGVKPTTKILIDLVFTMSECSPTSGSISTSTAHPKRAPLRGIASGRGGHDCEKTVGRDDRGSGSGLSAGTDALRMACLECLEA-------LFRAPFDPASSYLTMSSGSGA-----------------------------------------DASAWSEVRGVLRDAFKGGIMAQLVQELLLCCCQGDGKRSSGISSKSAATGVTARQGA------GESWGGLKTARLAARCLDALCSFAPGASTWRRFLPGTFSGLFRAIRGQEVDSGGRGSVGAVQTSTPPLVSISLAVSTTAVAARREGLRRGLRGGASKSVLAETCLAVLKKVLLMCTGD----------VPNPSVDASSNLARLARPSTPPHALVTDGADSGGKGHT-NQANENPLLVLQRLARTSNARA------------ASGAGGTSGRPKRLSDHLG-TPSTPTAANAATS-----------------------EDSEWETQAGGRLRAFIPPLLAFCRLHPGWRVRRASAAFASALLVGSGGGGCYGGEEVDWLANGTRLGGEDSAPKEGLLGPLIPSLMEALVGLVMDDMPQVSAAAHEGLDHFRATLSPLRWLSLRGLLLERLCTIVEGLPAVAKSADERRLRVAFDLLAGYLSLLRFDARAALDARLPTVLSCLCEALEFDQNFNVQVLEGSHDALARAEIGRGRHDGVSPEGTESDGGVGGHRGGGPGRAIPKYYRRVLANVREDATVASAKRAVRFLGTYCDLASVADAILSSLET--PYPMPRPRSRRSSRQPSVGADAAGSTPPLAGAMSDHPQAQWQQQRQRIALATSGSDYPYAGGSDGGDGGLYRRRCLEWLRPRLPMAWVLNQALLGRVPGVTANERNGAGVGR-GEGSAAEA------------CLGRGLAVDVVERLVASRAFALPVTRAEATAAGDYPGDDSGSGTFDEFPGHQALLPDRPRARDSTG-----------YTRSGELLG--GERGYRVP--GLSSQVLDANATLVGTVMEALASLAEASGAEFGEAFLRRALYPLLEKAASAHPVVSQAAFATLWRVRLACGKFDDMSQLLEVNMDYVVDDIIRRVAACRTSARLHRRANGGA--VTSYGSGHTDGGAGSGASVPGVVEAVLRIGGSAMGPALVRDLAGVTFREVDACAWDPRQTRRSLGVLRAVASCVSVPSL------SNGERFRHAGVFSGAAEDKASRDAAASSALFKSPWFR 1290
            MLPL+LALAP  R   GG+ T   G           +P   REKA +CVT AVRASGSRFVEGYGVKPT  ++I LVFT+SECSP +G +   ++     P         G  C  T G      GSGL+AGTDALR++CL+CLE         +RA   P      +SS  G                                          + S WSEVR  L+DA  GGI+AQLVQEL                                       WGG + AR AA CL+ALCSF PG+S WRR LPGTFSGLFR IRG  +DSG   + G V  S+              VA R    RR  RG  SKS LAE CL  L KVLLMC G                  A+ + AR+ +      A V  G  +GG+  T N  + NPLL LQRLA TSNA A            AS A    G  +  SD+L  TP     A AA                         E+ EWE +   RLR  +PPLLAFC LHPGWRVRRA+A  AS LL   G G        +  A+G   G      K GLL PL P LMEALVGL++D MPQVSA A  GLD FRATLSP RWL LRG+LLERL TIVEGLPA+AKSADE+RLR AFDLLAGYLSLLRFDAR ALD RL  VLSCLCE LEFD++FNVQV                                                    ANVRED+T++SA+RAVR LG +CDL S+ADA +SSLET  P P                     +TP +A A+       W         +   S +   GG    +  +YRRRCL+WLR RLP+AWVLNQALLGR  G  A E    G  + G G AAEA             L RGLA+ ++ERL+AS AF +PV+RAEA AAG Y G   G+ +  +F   ++LL          G           YTRSG++LG  G+ G R P  G+S QVLDANATLV T++EAL SLAEASG   GEAFLRRALYPLLEKAAS HPVVSQ+A ATL RVR+ACG F+D SQLLE NMDYVVDD++RRV++   S+R  R  + G+  +T  G G T  G+G    +PGVVEAVLRIGGSAMGPALVRDLAGVT REVDACAWDPRQTR SLGVLRAVASCV++P L            +  G   GA E   +      SAL +SPWFR
Sbjct:    1 MLPLELALAPPDRGNAGGSKTSGPGWRHS-----PEVPVGAREKAFLCVTEAVRASGSRFVEGYGVKPTIHVMIRLVFTLSECSPANGGVLAGSSSGSAVP---------GAVCNGTGGV----RGSGLTAGTDALRLSCLKCLEVRVEGLLWCWRAVSPPPCYSSVLSSHQGCSFPFALLRVAIGGGSKWAVLRAPFACEWHHSXXXXXXXXXXNDSRWSEVRNDLKDAMGGGILAQLVQELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSRVWGGAEEARAAAGCLEALCSFTPGSSVWRRLLPGTFSGLFRTIRG--IDSGRDVAGGMVLPSS--------------VAQRGGDGRR--RGSGSKSALAEVCLGTLAKVLLMCAGGDAAAVAAATRAATAGTCAARDPARVVKAGEGIDAAVQGG--TGGEPETSNSTSSNPLLALQRLAVTSNASARNPGNLAQPAGTASAAASPEGHHR--SDNLSPTPPCQPGAFAAXXXXXXXXXXXXXXXXXXXATVIAVENPEWEARTSDRLRLLLPPLLAFCCLHPGWRVRRATAKLASDLLRAGGDG--------NEAASGGEAGRGSGEGKMGLLEPLTPLLMEALVGLLLDSMPQVSAEARRGLDSFRATLSPFRWLELRGILLERLSTIVEGLPAMAKSADEKRLRGAFDLLAGYLSLLRFDARTALDGRLSLVLSCLCETLEFDEDFNVQV---------------------------------------------------FANVREDSTLSSARRAVRLLGKFCDLPSLADASISSLETRPPRPXXXXXXXXXXXXXXXXXXXXXATPEIAVAIGP-----W---------SDRSSAFREDGGISSSNDTIYRRRCLKWLRLRLPLAWVLNQALLGRGSGSAAGE----GAAKDGGGEAAEAGKSNVTGEDEGIFLRRGLAISMLERLLASHAFNVPVSRAEAAAAG-YSGS-YGNDSAADFE-RESLLTSGAAGEGENGGVAALSRRPVEYTRSGQVLGAGGDGGTRSPSRGVSGQVLDANATLVSTIVEALGSLAEASGPGCGEAFLRRALYPLLEKAASTHPVVSQSALATLARVRVACGDFEDTSQLLEANMDYVVDDVVRRVSS---SSRRSRNVDVGSTMITHGGRGGTSAGSG----IPGVVEAVLRIGGSAMGPALVRDLAGVTLREVDACAWDPRQTRCSLGVLRAVASCVTLPPLPAPGVDEKDTDGKEEGDSQGATERNGN------SALVESPWFR 1160          
BLAST of mRNA_H-elongata_contig164.4046.1 vs. uniprot
Match: A0A835Z555_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z555_9STRA)

HSP 1 Score: 124 bits (310), Expect = 9.960e-25
Identity = 90/295 (30.51%), Postives = 139/295 (47.12%), Query Frame = 0
Query:  571 SEDSEWETQAGGRLRAFIPPLLAFCRLHPGWRVRRASAAFASALLVGSGGGGCYGGEEVDWLANGTRLGGEDSAPKEGLLGPLIPSLMEALVGLVMDDMPQVSAAAHEGLDHFRATLSPLRWLSLRGLLLERLCTIVEGLPAVAKSA-DERRLRVAFDLLAGYLSLLRFDARAALDARLPTVLSCLCEALEFDQ-NFNVQVLEGSHDALARAEIGRGRHDGVSPEGTESDGGVGGHRGGGPGRAIPK-YYRRVLANVREDATVASAKRAVRFLGTYCDLASVADAILSSLETPYP 862
            +++  WE +A  +L+A + PLL FCR H  WRVR A A  A  LL              +W+A          AP E +LGPL+ + ++A++GL+ D+MPQV  AA EG+  +R  L    WL +R  L      + + LP++A+SA  ER L    +LL+GYL++L  +     ++    +L  LC  L FD+ +  VQ+L     A    +                           P    P  Y+R+ L   R+DAT+A+ +R +  L    D   ++DA+   LE  +P
Sbjct:  299 TQEHPWELEAAPKLQALLLPLLEFCRRHGSWRVRAALAQQACQLLC-------------EWVAR---------APAEPVLGPLVKAPLQAVLGLLWDEMPQVGEAAQEGIARYRQLLPTEAWLDVRASLHAEAAAVADALPSLARSAASERHLAAQLNLLSGYLTVLGEEVG---ESHWQHLLRQLCRVLVFDEGSAGVQLLVARRTASVAQD---------------------------PTALAPTPYFRKTLTYCRQDATLAAVQRTLHLLAQCGDPWLLSDALTEGLEAAHP 541          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig164.4046.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FND3_ECTSI1.020e-28248.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KT26_9PHAE8.740e-25145.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z555_9STRA9.960e-2530.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1057..1160
e-value: 3.5E-5
score: 25.4
NoneNo IPR availablePANTHERPTHR18460UNCHARACTERIZEDcoord: 40..1246
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 359..1149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig164contigH-elongata_contig164:15229..24396 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig164.4046.1mRNA_H-elongata_contig164.4046.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig164 15229..24396 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig164.4046.1 ID=prot_H-elongata_contig164.4046.1|Name=mRNA_H-elongata_contig164.4046.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1294bp
PPAHPHTHRQVVVIPGLGGAQMELRGGATAPEQLGVGHNSKALLSVLRPF
CISAMIALEETLVSIGIPAGGRLPPQDPDQLVNSTAVALQIDAGRRLEAT
LASLHSALSGIASSTSTPAEQFPGLASALAPTLPFLMLPLQLALAPAKRA
GGGGNSTGMAGNEGKRGVGVTRMPAAVREKALMCVTTAVRASGSRFVEGY
GVKPTTKILIDLVFTMSECSPTSGSISTSTAHPKRAPLRGIASGRGGHDC
EKTVGRDDRGSGSGLSAGTDALRMACLECLEALFRAPFDPASSYLTMSSG
SGADASAWSEVRGVLRDAFKGGIMAQLVQELLLCCCQGDGKRSSGISSKS
AATGVTARQGAGESWGGLKTARLAARCLDALCSFAPGASTWRRFLPGTFS
GLFRAIRGQEVDSGGRGSVGAVQTSTPPLVSISLAVSTTAVAARREGLRR
GLRGGASKSVLAETCLAVLKKVLLMCTGDVPNPSVDASSNLARLARPSTP
PHALVTDGADSGGKGHTNQANENPLLVLQRLARTSNARAASGAGGTSGRP
KRLSDHLGTPSTPTAANAATSEDSEWETQAGGRLRAFIPPLLAFCRLHPG
WRVRRASAAFASALLVGSGGGGCYGGEEVDWLANGTRLGGEDSAPKEGLL
GPLIPSLMEALVGLVMDDMPQVSAAAHEGLDHFRATLSPLRWLSLRGLLL
ERLCTIVEGLPAVAKSADERRLRVAFDLLAGYLSLLRFDARAALDARLPT
VLSCLCEALEFDQNFNVQVLEGSHDALARAEIGRGRHDGVSPEGTESDGG
VGGHRGGGPGRAIPKYYRRVLANVREDATVASAKRAVRFLGTYCDLASVA
DAILSSLETPYPMPRPRSRRSSRQPSVGADAAGSTPPLAGAMSDHPQAQW
QQQRQRIALATSGSDYPYAGGSDGGDGGLYRRRCLEWLRPRLPMAWVLNQ
ALLGRVPGVTANERNGAGVGRGEGSAAEACLGRGLAVDVVERLVASRAFA
LPVTRAEATAAGDYPGDDSGSGTFDEFPGHQALLPDRPRARDSTGYTRSG
ELLGGERGYRVPGLSSQVLDANATLVGTVMEALASLAEASGAEFGEAFLR
RALYPLLEKAASAHPVVSQAAFATLWRVRLACGKFDDMSQLLEVNMDYVV
DDIIRRVAACRTSARLHRRANGGAVTSYGSGHTDGGAGSGASVPGVVEAV
LRIGGSAMGPALVRDLAGVTFREVDACAWDPRQTRRSLGVLRAVASCVSV
PSLSNGERFRHAGVFSGAAEDKASRDAAASSALFKSPWFRRER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold