prot_H-elongata_contig163998.4044.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig163998.4044.1
Unique Name	prot_H-elongata_contig163998.4044.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	121

Homology

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BLAST of mRNA_H-elongata_contig163998.4044.1 vs. uniprot
Match: A0A432FEB4_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A432FEB4_9BACT)

HSP 1 Score: 59.7 bits (143), Expect = 4.960e-9
Identity = 35/63 (55.56%), Postives = 42/63 (66.67%), Query Frame = 0

Query:   19 VLPAISQGVSVNAIGGGGDTPLHAAAATGNTDSARLLLARGADPLRRNTVGETPLDLARRLGQ 81
            V  AI+ G  VN +G  G+TPLH AA  G+   A LL+A+GAD L   + GETPLDLA RLGQ
Sbjct:   42 VKQAIADGADVNTMGDEGETPLHQAALGGHKKVAELLIAKGAD-LNAKSYGETPLDLAIRLGQ 103

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BLAST of mRNA_H-elongata_contig163998.4044.1 vs. uniprot
Match: A0A809CWE9_RALSL (Uncharacterized protein n=8 Tax=Burkholderiaceae TaxID=119060 RepID=A0A809CWE9_RALSL)

HSP 1 Score: 54.3 bits (129), Expect = 4.600e-6
Identity = 30/56 (53.57%), Postives = 37/56 (66.07%), Query Frame = 0

Query:   23 ISQGVSVNAIGGGGDTPLHAAAATGNTDSARLLLARGADPLRRNTVGETPLDLARR 78
            +  G  VNA+G  G T LH AA  GNT++ARLLLA GADP  R+   +T LD AR+
Sbjct:  421 LDSGADVNAVGPHGMTALHMAAIDGNTETARLLLAHGADPNVRDEQHKTALDYARK 476

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BLAST of mRNA_H-elongata_contig163998.4044.1 vs. uniprot
Match: A0A8K1FHF6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHF6_PYTOL)

HSP 1 Score: 53.5 bits (127), Expect = 8.890e-6
Identity = 29/54 (53.70%), Postives = 34/54 (62.96%), Query Frame = 0

Query:   26 GVSVNAIGGGGDTPLHAAAATGNTDSARLLLARGADPLRRNTVGETPLDLARRL 79
            G  VNA    G TPLH AA +G+ D  + LLARGADP RR+  G TPL + R L
Sbjct:  154 GFDVNARDAFGRTPLHVAAMSGHVDVTKALLARGADPTRRDRAGLTPLSVVRTL 207

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BLAST of mRNA_H-elongata_contig163998.4044.1 vs. uniprot
Match: A0A536NHD2_9CHLR (Ankyrin repeat domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536NHD2_9CHLR)

HSP 1 Score: 50.1 bits (118), Expect = 9.650e-5
Identity = 32/72 (44.44%), Postives = 42/72 (58.33%), Query Frame = 0

Query:   34 GGGDTPLHAAAATGNTDSARLLLARGADPLRRNTVGETPLDLARRLGQGREASRGMNGIVWILEGAASEAAA 105
            G G TPLH AA  G+ +SARLLLA GA+P RR   G T  D+A        + RG  G++ +L  + +E AA
Sbjct:  160 GAGFTPLHVAAENGDVESARLLLAAGANPERRTDDGRTAADMA--------SERGHTGVLVLLRESPAEEAA 223

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig163998.4044.1 vs. uniprot

BLAST of mRNA_H-elongata_contig163998.4044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A432FEB4_9BACT	4.960e-9	55.56	Uncharacterized protein n=1 Tax=Verrucomicrobia ba...	[more]
A0A809CWE9_RALSL	4.600e-6	53.57	Uncharacterized protein n=8 Tax=Burkholderiaceae T...	[more]
A0A8K1FHF6_PYTOL	8.890e-6	53.70	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A536NHD2_9CHLR	9.650e-5	44.44	Ankyrin repeat domain-containing protein n=1 Tax=C...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 35..64 e-value: 2.7E-4 score: 30.2
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 35..67 score: 13.17
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 7..112 e-value: 2.1E-17 score: 65.3
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 22..81
None	No IPR available	PFAM	PF13857	Ank_5	coord: 26..76 e-value: 3.6E-10 score: 39.9
None	No IPR available	PANTHER	PTHR24134	FAMILY NOT NAMED	coord: 23..81
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 23..81 score: 17.422

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig163998	contig	H-elongata_contig163998:976..1338 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig163998.4044.1	mRNA_H-elongata_contig163998.4044.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig163998 976..1338 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig163998.4044.1 ID=prot_H-elongata_contig163998.4044.1|Name=mRNA_H-elongata_contig163998.4044.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp
MFYPQCLAQCFTRNAWRNVLPAISQGVSVNAIGGGGDTPLHAAAATGNTD
SARLLLARGADPLRRNTVGETPLDLARRLGQGREASRGMNGIVWILEGAA
SEAAAVAAAAAVIEAEKAAAR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR036770	Ankyrin_rpt-contain_sf
IPR020683	Ankyrin_rpt-contain_dom