prot_H-elongata_contig16373.4031.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 209 bits (533), Expect = 1.170e-61 Identity = 119/245 (48.57%), Postives = 156/245 (63.67%), Query Frame = 0
Query: 1 MKRFDVHSTSDIPASP-VDLGPKRKDEPGGDWPVRKAFRGSLWLSTWN------------------------------------------------------TDADYTDKDNSRRLVYGVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVL-DSQRAKALIENPLSSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYH 189
+ RFDV STS IPASP VD+GPKR DE GG+WPVR+A +W+ST++ DA Y D ++ RR V G+A T+GGTV+SH SKTQ +VSL ++E+E+I AGE VKEALF R VLS IAPET+ +SI VL D+Q A AL++NPLSSARSKHIDVR+HFIR LFR+ +IS+++V++++QHAD+ TKALS+++ QYH
Sbjct: 257 VNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYH 500
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5KJM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM0_9PHAE) HSP 1 Score: 200 bits (509), Expect = 1.180e-61 Identity = 117/222 (52.70%), Postives = 146/222 (65.77%), Query Frame = 0
Query: 1 MKRFDVHSTSDIPASPV-DLGPKRKDEPGGDWPVRKAFRGSLWLSTWN---------TDADYTDKDNSRR------------------LVY----GVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVL-DSQRAKALIENPLSSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYH 189
++ FDV STS IPASP DLGPKR+DE GG+WPVR+A +W+S ++ T A + R + Y GVA T+GGTVVSH SKTQ +VSL ++E+E+I GE VK ALF R VLS IAPET+ +SI VL D+Q A AL++NPLSS R+KHIDVRFHFIR LFR+ NISV +V + +QHAD+ TKALSRA+ QYH
Sbjct: 2 VEHFDVQSTSRIPASPGGDLGPKREDEEGGEWPVREAIGSMMWVSNFSRPDVSSAVCTVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGVATTVGGTVVSHGSKTQSIVSLSSTEAEYIATGEGVKGALFVRAVLSFIAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRFHFIRGLFRSGNISVNFVPTTEQHADVLTKALSRASLQYH 223
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5KCA5_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCA5_9PHAE) HSP 1 Score: 195 bits (496), Expect = 2.730e-59 Identity = 117/250 (46.80%), Postives = 150/250 (60.00%), Query Frame = 0
Query: 1 MKRFDVHSTSDIPASP-VDLGPKRKDEPGGDWPVRKAFRGSLWLSTWN------------------------------------------------------TDADYTDKDNSRRLVYGVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVL-DSQRAKALIENPL-----SSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYH 189
++RFDV STS IPA+P DLGPKR+DE GG+WPVR+A +W+ST++ DA Y D ++ RR V G+A T GGTVVSH SK Q +VSL ++E+EHI AGE VKEALF R VLS +APET +SI VL D+Q AL++NPL SS R+KHIDVRFHFIR LFR+ +I+V++V + +QHAD+ T+ALSRA+ QYH
Sbjct: 2 VERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTGGGTVVSHGSKKQSIVSLSSTEAEHIAAGEGVKEALFMRAVLSFVAPETRGSSIQVLEDNQGGMALVQNPLVQNPLSSGRTKHIDVRFHFIRGLFRSGDITVKFVPTTEQHADLLTQALSRASLQYH 250
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5LGF7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGF7_9PHAE) HSP 1 Score: 209 bits (533), Expect = 4.070e-59 Identity = 119/245 (48.57%), Postives = 156/245 (63.67%), Query Frame = 0
Query: 1 MKRFDVHSTSDIPASP-VDLGPKRKDEPGGDWPVRKAFRGSLWLSTWN------------------------------------------------------TDADYTDKDNSRRLVYGVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVL-DSQRAKALIENPLSSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYH 189
+ RFDV STS IPASP VD+GPKR DE GG+WPVR+A +W+ST++ DA Y D ++ RR V G+A T+GGTV+SH SKTQ +VSL ++E+E+I AGE VKEALF R VLS IAPET+ +SI VL D+Q A AL++NPLSSARSKHIDVR+HFIR LFR+ +IS+++V++++QHAD+ TKALS+++ QYH
Sbjct: 1646 VNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLEVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYH 1889
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5KQ05_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ05_9PHAE) HSP 1 Score: 200 bits (509), Expect = 1.490e-58 Identity = 113/233 (48.50%), Postives = 148/233 (63.52%), Query Frame = 0
Query: 1 MKRFDVHSTSDIPASP-VDLGPKRKDEPGGDWPVRKAFRGSLWLSTWN------------------------------------------TDADYTDKDNSRRLVYGVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVLD-SQRAKALIENPLSSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYH 189
++RFDV STS IPASP DLGPK+ DE GG WPVR+A +W+ST++ DA Y D ++ RR V G+A T+GGTV+SH S TQ +VS+ ++E+E+I AGE VKEALF R VLS + PET+ +SI VLD +Q A AL++NPL S R+KHIDVR+HFIR LFR+ +ISV++V + +QHAD+ TKALSR + QYH
Sbjct: 263 VRRFDVQSTSRIPASPGADLGPKQGDEKGGQWPVREAIGSMMWVSTFSRPDVSFAVRAWDAIQKIVGYSKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVISHGSNTQSIVSVSSTEAEYIAAGEGVKEALFVRAVLSFVPPETSGSSIEVLDDNQGAIALVQNPLRSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYH 494
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5KGN1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGN1_9PHAE) HSP 1 Score: 205 bits (521), Expect = 4.370e-58 Identity = 118/245 (48.16%), Postives = 153/245 (62.45%), Query Frame = 0
Query: 1 MKRFDVHSTSDIPASP-VDLGPKRKDEPGGDWPVRKAFRGSLWLSTWN------------------------------------------------------TDADYTDKDNSRRLVYGVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVL-DSQRAKALIENPLSSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYH 189
++RFDV STS IPA+P DLGPKR+DE GG+WPVR+A +W+ST++ DA Y D ++ RR V G+A T+GGTVVSH SKTQ +VSL ++E+E+I AGE VKEALF R VLS +APET+ +SI VL D+Q A AL++NPLSS R+KHIDVR+HFIR LFR+ +ISV++V + +QHAD+ TKALSR + QYH
Sbjct: 602 VERFDVQSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYH 845
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 204 bits (520), Expect = 2.150e-57 Identity = 118/245 (48.16%), Postives = 153/245 (62.45%), Query Frame = 0
Query: 1 MKRFDVHSTSDIPASP-VDLGPKRKDEPGGDWPVRKAFRGSLWLSTWN------------------------------------------------------TDADYTDKDNSRRLVYGVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVL-DSQRAKALIENPLSSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYH 189
++RFDV STS IPA+P DLGPKR+DE GG+WPVR+A +W+ST++ DA Y D ++ RR V G+A T+GGTVVSH SKTQ +VSL ++E+E+I AGE VKEALF R VLS +APET+ +SI VL D+Q A AL++NPLSS R+KHIDVR+HFIR LFR+ +ISV++V + +QHAD+ TKALSR + QYH
Sbjct: 994 VERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYH 1237
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 204 bits (520), Expect = 2.250e-57 Identity = 118/245 (48.16%), Postives = 153/245 (62.45%), Query Frame = 0
Query: 1 MKRFDVHSTSDIPASP-VDLGPKRKDEPGGDWPVRKAFRGSLWLSTWN------------------------------------------------------TDADYTDKDNSRRLVYGVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVL-DSQRAKALIENPLSSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYH 189
++RFDV STS IPA+P DLGPKR+DE GG+WPVR+A +W+ST++ DA Y D ++ RR V G+A T+GGTVVSH SKTQ +VSL ++E+E+I AGE VKEALF R VLS +APET+ +SI VL D+Q A AL++NPLSS R+KHIDVR+HFIR LFR+ +ISV++V + +QHAD+ TKALSR + QYH
Sbjct: 1373 VERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYH 1616
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 204 bits (520), Expect = 2.260e-57 Identity = 118/245 (48.16%), Postives = 153/245 (62.45%), Query Frame = 0
Query: 1 MKRFDVHSTSDIPASP-VDLGPKRKDEPGGDWPVRKAFRGSLWLSTWN------------------------------------------------------TDADYTDKDNSRRLVYGVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVL-DSQRAKALIENPLSSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYH 189
++RFDV STS IPA+P DLGPKR+DE GG+WPVR+A +W+ST++ DA Y D ++ RR V G+A T+GGTVVSH SKTQ +VSL ++E+E+I AGE VKEALF R VLS +APET+ +SI VL D+Q A AL++NPLSS R+KHIDVR+HFIR LFR+ +ISV++V + +QHAD+ TKALSR + QYH
Sbjct: 1536 VERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYH 1779
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5J9E9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E9_9PHAE) HSP 1 Score: 201 bits (512), Expect = 4.220e-57 Identity = 108/191 (56.54%), Postives = 138/191 (72.25%), Query Frame = 0
Query: 1 MKRFDVHSTSDIPASP-VDLGPKRKDEPGGDWPVRKAFRGSLWLSTWNTDADYTDKDNSRRLVYGVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVL-DSQRAKALIENPLSSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYH 189
+KR DV STS IPA+P VDLGPKR DE GG+WPVR+A +W S V G+A T+G TVVSH SKTQ +VSL ++ESE+I AGE +K+ALF R VLS +APET+ +SI L D+Q A AL++NPLSS R+KHIDVRFHFIR LF + +ISV+++ + +QHAD+ TKAL+RA+ QYH
Sbjct: 456 VKRIDVQSTSRIPATPGVDLGPKRDDEKGGEWPVREAIGSMMWRS-----------------VQGLATTVGSTVVSHGSKTQSIVSLSSTESEYIAAGEGLKDALFVRAVLSFVAPETSGSSIQALEDNQGAIALVQNPLSSGRTKHIDVRFHFIRGLFMSGDISVKFIPTTEQHADLLTKALNRASLQYH 629 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig16373.4031.1 ID=prot_H-elongata_contig16373.4031.1|Name=mRNA_H-elongata_contig16373.4031.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=200bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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