prot_H-elongata_contig16300.3999.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16300.3999.1
Unique Nameprot_H-elongata_contig16300.3999.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length594
Homology
BLAST of mRNA_H-elongata_contig16300.3999.1 vs. uniprot
Match: D7FRR0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRR0_ECTSI)

HSP 1 Score: 619 bits (1596), Expect = 6.530e-212
Identity = 365/691 (52.82%), Postives = 434/691 (62.81%), Query Frame = 0
Query:   21 DVSPGE--RKRGG-ESRRLPPRIRRFVFQKELALHVSMSILSIAVPFSLSGSPWLVSIPLSLWCFYTVMFVAGAKRAGIVSRRFDRFKRSFVTAMEEFLPRRLLPIFSLSFLSVVVAVALTAAKLGGSPLCVASCHSCLSSWANARPLSTD------------------------------------------------------------DPPDP---------NQACGFANGKELLAYYTVSQSAILVYLAVMAGLLTCLAWKVSEEELAGREAAEGRLMAQNPRAFELREQMILEHGRPGSSVRPELTRAWLIFGVVAASIFVLVGWRKWSELPMNAMTVVMIAADVTVTVTSVLMLHVGFHGRLIALYEGNLHRVHFLSKVLREGISGMEEPWVHVAEAWWSLRCFVLGEDLTLDYDVGGVGISATVAIIVVSFVVAIVQVVREGSDAILSPPGSYCAYATVYMTVSLVRILGLAAKTCLEQQLHAGCIEDYLKNLARVSSKASVSSGVS---GRYGPSPSTLPQ------------------------------------DQSSGLFSSQSSVGGEAVYSMSGHLNSAGETQKHPDSFSAEKEIGLVEGRRDKEAVGGVSN-------PGQESIKNMVVKIKTSDPCPCVLGIPIKPASFAKAKLCAYVFFAVISAKLVWDMIHGL 593
            DVS G   RKRG  + RR   RI +FVFQKELALH SM ILSIA+PFSLSGSPWL +IP+ +WCFY  MFV GAKRA  V   FDRFKRSFV AMEEFLP RL+P+ SLSFLSVV+AV LTAA+LGG PLC++SC +CL SW +A P ++                                                             D   P          +ACG+ANGKELLAYYTVSQSAIL+YLAVM GLLTCLAWKVSEEELA R+AAE RL  QNPRAFELRE+MILEHGRPGSSVRPE T  WL+FG+VAA  F L+GWRKW +LP+ A+TVV+I A+VT T+ SVLMLHVGFHGRLIALY+GNL RV FLSK+LREG S  EEPWVH AEAWW LR FVL EDL+LDYDVGG+G+SAT  I++ SFVVAI Q+VREG DA+L+PPGSYCAYA+VY+TV L+RI GLA KT LEQQLH G I+DY+ NL  +++K + SS       R  PSPS                                         + S   +S  +    AV   S   ++ G       S  A ++ G   G R    +GG  N       P QE+++ M+V I T DP PCVLGIP+KPA FA +K+  +  FAVIS KL++D+I G+
Sbjct:  105 DVSGGGGGRKRGKRDRRRFFLRIHKFVFQKELALHFSMCILSIAIPFSLSGSPWLAAIPVCVWCFYNAMFVMGAKRASTVLPGFDRFKRSFVAAMEEFLPPRLVPVLSLSFLSVVIAVTLTAARLGGPPLCISSCRTCLGSWKHAHPATSPQGRGAAASTSGEASRSRSKFSPNIVGAFEGAKRGRDSAAAGDHRQAGGSGGGGENFWVEADRASPARGSQRAKSGEACGYANGKELLAYYTVSQSAILIYLAVMTGLLTCLAWKVSEEELAQRQAAESRLKGQNPRAFELRERMILEHGRPGSSVRPETTCPWLMFGLVAACTFTLIGWRKWGDLPVTAVTVVVIGANVTTTLASVLMLHVGFHGRLIALYQGNLQRVQFLSKLLREGTSKAEEPWVHAAEAWWFLRSFVLREDLSLDYDVGGLGVSATFFIVLASFVVAIAQIVREGLDAMLNPPGSYCAYASVYLTVCLIRIFGLATKTYLEQQLHVGIIQDYIDNLVAIAAKTASSSASELKKERGQPSPSLXXXXXXXXXXXXXXXXXXXXAAERGAADNAAHPNAANSVSEPSPANASLLAAARAAVTGTSALGDAGGRRDTRDRSPKAAEDGGSGGGAR---GIGGAGNEGEALLHPAQEAMRRMIVHIDTLDPYPCVLGIPVKPALFATSKVYVFGCFAVISVKLMYDVISGI 792          
BLAST of mRNA_H-elongata_contig16300.3999.1 vs. uniprot
Match: A0A482RT25_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RT25_9ARCH)

HSP 1 Score: 182 bits (462), Expect = 8.130e-50
Identity = 97/225 (43.11%), Postives = 143/225 (63.56%), Query Frame = 0
Query:   34 RRLPPRIRRFVFQKELALHVSMSILSIAVPFSLSGSPWLVSIPLSLWCFYTVMFVAGAKRAGIVSRRFDRFKRSFVTAMEEFLPRRLLPIFSLSFLSVVVAVALTAAKLGGSPLCVASCHSCLSSWANARPLSTDDPPDPNQ---ACGFANGKELLAYYTVSQSAILVYLAVMAGLLTCLAWKVSEEELAGREAAEGRLMAQNPRAFELREQMILEHGRPGSSVR 255
            R+   R+ +F FQ +L LH  + +LS+  PF  SG+     +PLS+W FY V+F+    +A +V   F + K SF + +EEF   +LLP+ S+SFL V +++ +T   LGG PLC   C +CLSSW N+  LS+ D    N     CG+ANGKELLAYYT+SQ++ L++  V+  ++ C+AW+V+EEE+  RE AE  L  ++P A+ELR ++I  HG P S +R
Sbjct:   27 RKFSLRVHKFSFQWDLVLHFLICLLSLC-PFFFSGNRLFALLPLSVWVFYHVLFILNPNQANLVIPGFGKLKHSFKSTIEEFFSPKLLPVLSISFLLVALSLGVTGHTLGGPPLCYHPCGTCLSSWTNSISLSSPDSSSINSYRHGCGYANGKELLAYYTMSQTSFLLFCVVVLSMVVCMAWRVAEEEIEEREQAEAWLKRESPLAYELRGEVIGTHGPPASPIR 250          
BLAST of mRNA_H-elongata_contig16300.3999.1 vs. uniprot
Match: A0A7S3M970_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M970_9STRA)

HSP 1 Score: 171 bits (433), Expect = 3.350e-45
Identity = 92/214 (42.99%), Postives = 132/214 (61.68%), Query Frame = 0
Query:  235 RAFELREQMILEHGRPGSSVRPELTRAWLIFGVVAASIFVLVGWRKWSELPMNAMTVVMIAADVTVTVTSVLMLHVGFHGRLIALYEGNLHRVHFLSKVLREGISGMEEPWVHVAEAWWSLRCFVLGEDLTLDYDVGGVGISATVAIIVVSFVVAIVQVVREGSDAILSPPGSYCAYATVYMTVSLVRILGLAAKTCLEQQLHAGCIEDYLKNL 448
            +AFE+R+ +I   G PGSSVRPE +  W+ FGV AA  F L+GW  W  LP +    ++I  ++   + S L+LH+ F GRL+ALY+ N HRV  L+++L  G +  EE      ++WW+ R FVL +DL+LDYD+GG+ +SAT  I ++ F   I Q+VREG   +L PPGSY AYA +Y+T  L+++  LA  T  EQ  H   ++     L
Sbjct:    3 KAFEMRQTLIERFGSPGSSVRPEGSATWIFFGVTAALTFTLLGWHNWYVLPPSNTATLLIILNLLTILMSTLILHLSFFGRLLALYKRNYHRVECLTQLL--GKTDKEE-----LDSWWNCRNFVLNDDLSLDYDIGGLAVSATFLIALLLFGALITQLVREGLQGMLEPPGSYLAYACLYITCCLIKLFTLATNTYEEQHRHIAVLQGISNGL 209          
BLAST of mRNA_H-elongata_contig16300.3999.1 vs. uniprot
Match: A0A7S3M8A9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8A9_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.590e-40
Identity = 91/238 (38.24%), Postives = 136/238 (57.14%), Query Frame = 0
Query:   39 RIRRFVFQKELALHVSMSILSIAVPFSLSGSPWLVSIPLSLWCFYTVMFVAGAKRAGIVSRRFDRFKRSFVTAMEEFLPRRLLPIFSLSFLSVVVAVALTAAKLGGSPLCVASCHSCLSSWANARPLST--------------------DDPPDP------------NQACGFANGKELLAYYTVSQSAILVYLAVMAGLLTCLAWKVSEEELAGREAAEGRLMAQNPRAFELREQMI 244
            R+ +F FQ ELA+H+ + I+S+A PF  +G      +P+S+W FY V+F+ G + +  V  RF R K SF   +EEF   +LLP+ S+SFL VV+++A+T  +LGG PLC   C  CL++W ++ PLS                     D P DP               CG+ANGKE+L YYT+ Q++ L+++ V+  +L CLAW+V++EE   R  AE  L     +AFE+R+ +I
Sbjct:   60 RVHKFAFQWELAIHLVVCIISLA-PFFFTGRRVFSLLPISVWLFYNVLFLIGPQHSNKVIPRFGRIKNSFKNNIEEFFSPKLLPVLSISFLCVVLSLAVTGHRLGGPPLCYHPCGVCLATWKHSIPLSAAAAALVARVDPLMQPLVTPIDSPYDPLVGRMDPLVDAYRVGCGYANGKEMLGYYTMGQTSFLLFIVVVVAILVCLAWRVADEEKTERRTAEEWLKRDALKAFEMRQTLI 296          
BLAST of mRNA_H-elongata_contig16300.3999.1 vs. uniprot
Match: A0A482S024_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S024_9ARCH)

HSP 1 Score: 149 bits (376), Expect = 1.140e-37
Identity = 78/215 (36.28%), Postives = 119/215 (55.35%), Query Frame = 0
Query:  262 WLIFGVVAASIFVLVGWRKWSELPMNAMTVVMIAADVTVTVTSVLMLHVGFHGRLIALYEGNLHRVHFLSKVLREGISGMEEPWVHVAEAWWSLRCFVLGEDLTLDYDVGGVGISATVAIIVVSFVVAIVQVVREGSDAILSPPGSYCAYATVYMTVSLVRILGLAAKTCLEQQLHAGCIEDYLKNLARVSSKAS---VSSGVSGRYGPSPSTLP 473
            W+ FG+ AA  F L+GW  W  L  +    ++I  ++   +T++L+LH+GF GRLIALY  N HRV  ++++L    +  +    H  + WW+ R FVL +DL+LDYD+GG+ +S T  + V+  +V    +  +G   +L PPGSYCAY+ +Y+T  L+RI  LA  T  EQQ H   ++     L    S+       +   G  G +P  LP
Sbjct:    2 WVFFGITAAITFTLLGWHNWHILSPSPSATLLIVLNLLTIITTILILHLGFFGRLIALYTRNFHRVAHITRLLHSQHAHAQGSTTHELDVWWNARSFVLNDDLSLDYDIGGLAVSLTFVLNVIVGIVLATVLYDQGYAGMLEPPGSYCAYSCMYITSCLIRIFQLATSTYTEQQTHLSLLQQMSVRLMMAGSEVGGYGAGNLNGGGLGSTPPPLP 216          
BLAST of mRNA_H-elongata_contig16300.3999.1 vs. uniprot
Match: A0A7S2B501_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B501_9STRA)

HSP 1 Score: 124 bits (311), Expect = 3.220e-29
Identity = 58/91 (63.74%), Postives = 74/91 (81.32%), Query Frame = 0
Query:  351 AWWSLRCFVLGEDLTLDYDVGGVGISATVAIIVVSFVVAIVQVVREGSDAILSPPGSYCAYATVYMTVSLVRILGLAAKTCLEQQLHAGCI 441
            AWWS+R FVL EDL+LDYD+GG+G+SAT  I++VSF+VA+VQ+VREG  A+LSPPGSYCAYA+VY+TV L+RI  LA  T  +QQ H   +
Sbjct:   17 AWWSVRSFVLAEDLSLDYDIGGLGVSATFVIVLVSFIVAVVQIVREGLHAMLSPPGSYCAYASVYLTVCLIRIFSLATLTFKQQQSHVAML 107          
BLAST of mRNA_H-elongata_contig16300.3999.1 vs. uniprot
Match: A0A7S2B4U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B4U9_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.220e-5
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0
Query:  280 KWSELPMNAMTVVMIAADVTVTVTSVLMLHVGFHGRLIALYEGNLHRVHFLSKVL 334
            +W ELP    + ++I  +V     S+++LHVGF+GRL ALY+ NL RV FLS+ L
Sbjct:    4 EWQELPFTVASSIIICVNVATIFISIIILHVGFYGRLNALYQRNLSRVQFLSRCL 58          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16300.3999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FRR0_ECTSI6.530e-21252.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A482RT25_9ARCH8.130e-5043.11Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3M970_9STRA3.350e-4542.99Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S3M8A9_9STRA1.590e-4038.24Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A482S024_9ARCH1.140e-3736.28Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A7S2B501_9STRA3.220e-2963.74Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2B4U9_9STRA1.220e-547.27Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..140
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 213..260
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 405..425
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 191..212
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 290..312
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 313..369
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 261..278
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 370..393
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 394..404
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 572..590
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..91
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 279..289
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 591..593
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..190
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 426..571
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..48
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 92..119
NoneNo IPR availableTMHMMTMhelixcoord: 404..426
NoneNo IPR availableTMHMMTMhelixcoord: 261..278
NoneNo IPR availableTMHMMTMhelixcoord: 372..394
NoneNo IPR availableTMHMMTMhelixcoord: 572..591
NoneNo IPR availableTMHMMTMhelixcoord: 49..71
NoneNo IPR availableTMHMMTMhelixcoord: 190..212
NoneNo IPR availableTMHMMTMhelixcoord: 118..140
NoneNo IPR availableTMHMMTMhelixcoord: 75..97
NoneNo IPR availableTMHMMTMhelixcoord: 288..310

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16300contigH-elongata_contig16300:1940..6134 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16300.3999.1mRNA_H-elongata_contig16300.3999.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16300 1763..6537 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16300.3999.1 ID=prot_H-elongata_contig16300.3999.1|Name=mRNA_H-elongata_contig16300.3999.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=594bp
MSARASRFGVSENARVGKGNDVSPGERKRGGESRRLPPRIRRFVFQKELA
LHVSMSILSIAVPFSLSGSPWLVSIPLSLWCFYTVMFVAGAKRAGIVSRR
FDRFKRSFVTAMEEFLPRRLLPIFSLSFLSVVVAVALTAAKLGGSPLCVA
SCHSCLSSWANARPLSTDDPPDPNQACGFANGKELLAYYTVSQSAILVYL
AVMAGLLTCLAWKVSEEELAGREAAEGRLMAQNPRAFELREQMILEHGRP
GSSVRPELTRAWLIFGVVAASIFVLVGWRKWSELPMNAMTVVMIAADVTV
TVTSVLMLHVGFHGRLIALYEGNLHRVHFLSKVLREGISGMEEPWVHVAE
AWWSLRCFVLGEDLTLDYDVGGVGISATVAIIVVSFVVAIVQVVREGSDA
ILSPPGSYCAYATVYMTVSLVRILGLAAKTCLEQQLHAGCIEDYLKNLAR
VSSKASVSSGVSGRYGPSPSTLPQDQSSGLFSSQSSVGGEAVYSMSGHLN
SAGETQKHPDSFSAEKEIGLVEGRRDKEAVGGVSNPGQESIKNMVVKIKT
SDPCPCVLGIPIKPASFAKAKLCAYVFFAVISAKLVWDMIHGL*
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