prot_H-elongata_contig162899.3992.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig162899.3992.1
Unique Nameprot_H-elongata_contig162899.3992.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length87
Homology
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BLAST of mRNA_H-elongata_contig162899.3992.1 vs. uniprot
Match: D7G7L2_ECTSI (G-patch_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7L2_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 2.760e-19
Identity = 44/58 (75.86%), Postives = 47/58 (81.03%), Query Frame = 0 
Query:   24 GVLPSADTRWLRANIRVRVVHKSYAGGRAYLGKGRVVDVPRVGEATVRMDLEDRVLEG 81
            G   S    WLRANIRVRV+HKSY GGRAYLGKGRVVDVPR G+ATVRMDL + VLEG
Sbjct:  538 GGQQSGPPAWLRANIRVRVIHKSYGGGRAYLGKGRVVDVPRAGQATVRMDLGELVLEG 595
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BLAST of mRNA_H-elongata_contig162899.3992.1 vs. uniprot
Match: A0A7S0D295_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D295_MICPS)

HSP 1 Score: 51.6 bits (122), Expect = 1.070e-5
Identity = 34/75 (45.33%), Postives = 40/75 (53.33%), Query Frame = 0 
Query:   11 SGRNRSDESGRGGGVLPSADTR----WLRANIRVRVVHKSYAGGRAYLGKGRVVDVPRVGEATVRMDLEDRVLEG 81
            SG NR D  G G G     + R    WL+ N RVR+V KS+ GGR YL KG VVDV    E  V ++    VL G
Sbjct:  125 SGENR-DAGGAGAGEKRKREKRVEPAWLQGNTRVRIVSKSFEGGRLYLKKGVVVDVLTPRECVVEINDSGEVLSG 198
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BLAST of mRNA_H-elongata_contig162899.3992.1 vs. uniprot
Match: A0A4Y7JJF7_PAPSO (G-patch domain-containing protein (Fragment) n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7JJF7_PAPSO)

HSP 1 Score: 51.6 bits (122), Expect = 1.220e-5
Identity = 24/59 (40.68%), Postives = 35/59 (59.32%), Query Frame = 0 
Query:   23 GGVLPSADTRWLRANIRVRVVHKSYAGGRAYLGKGRVVDVPRVGEATVRMDLEDRVLEG 81
            GG +   D  WL ++IRVRVV K++ GG+ Y+ KG +VDV       + MD    V++G
Sbjct:  196 GGKVKGDDPSWLISHIRVRVVSKTFRGGKLYMKKGEIVDVVERSVCDIAMDESKEVIQG 254
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig162899.3992.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G7L2_ECTSI2.760e-1975.86G-patch_2 domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S0D295_MICPS1.070e-545.33Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A4Y7JJF7_PAPSO1.220e-540.68G-patch domain-containing protein (Fragment) n=2 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041330KN17, SH3-like C-terminal domainPFAMPF18131KN17_SH3coord: 32..72
e-value: 5.0E-6
score: 26.5
NoneNo IPR availablePANTHERPTHR15818G PATCH AND KOW-CONTAININGcoord: 10..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig162899contigH-elongata_contig162899:288..548 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig162899.3992.1mRNA_H-elongata_contig162899.3992.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig162899 288..548 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig162899.3992.1 ID=prot_H-elongata_contig162899.3992.1|Name=mRNA_H-elongata_contig162899.3992.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
ERLRDRFDQSSGRNRSDESGRGGGVLPSADTRWLRANIRVRVVHKSYAGG
RAYLGKGRVVDVPRVGEATVRMDLEDRVLEGESRLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041330KN17_SH3