prot_H-elongata_contig16289.3991.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16289.3991.1
Unique Nameprot_H-elongata_contig16289.3991.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length269
Homology
BLAST of mRNA_H-elongata_contig16289.3991.1 vs. uniprot
Match: A0A6H5LI82_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LI82_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 3.750e-81
Identity = 129/271 (47.60%), Postives = 173/271 (63.84%), Query Frame = 0
Query:    5 CSDWTAWMPPRTDPAVIMQVITEGYIPVEANFIKLMEENSRFSRDNIYLMCLDEYSERAIEL-MGFRCVPVIDHLNNRNVKSVWKLRVRVLACLLEAGYDVITSDSDALWLKDPAVDFDLPEVRGSSIVASRGNMPRGIVRRWKSTLCMGFVLFRAGPGMDI--FLVNMERLAIKIGDDQKALNFALSKLKVDWDRATDMSFISTD-FGRGTVAEI------GINVTLLPHNQYTRFCDKVPIGPNTTVAHCHAPKRGALKMAWMQKKGLW 265
            C+DW  W+PPR+DPA++MQV++  Y+ +E NFI+LME NS  +RD++YLMC+D  S    E  M  RC+P +   +  +   +W LR RV++CL+EAG DVI SD+DALWL DP  DF+LP V  SS+VASRG  P+ +   W +T+CMGFVLFRA     +  FL  M+ L  K  DDQ ++N A   L + WD+ +DM ++ +D FG GT+  +        +VTLLPHN YTR CD+ PI   T VAHC APK    K  WM +  LW
Sbjct:   44 CADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSALTRDHLYLMCMDNVSVHFFESSMNIRCIP-LTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRRVVGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQESDMRYVESDSFGFGTIDTLVDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLW 313          
BLAST of mRNA_H-elongata_contig16289.3991.1 vs. uniprot
Match: D8LSV3_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSV3_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 2.940e-75
Identity = 130/282 (46.10%), Postives = 172/282 (60.99%), Query Frame = 0
Query:    1 RNGNCSDWTAWMPPRTDPAVIMQVITEGYIPVEANFIKLMEENSRFSRDNIYLMCLDEYSERAIELMGFRCV-------PVIDHLNNRNVKSVWKLRVRVLACLLEAGYDVITSDSDALWLKDPAVDFDLPEVRGSSIVASRGNMPRGIVRRWKSTLCMGFVLFRAGPGMDI-FLVNMERLAIKIGDDQKALNFALSKLKVDWDRATDMSFI-STDFGRGTVAEI----GINVTLLPHNQYTRFCDKVPIGPNTTVAHCHAPKRGALKMAWMQKKGLWEYYD 269
            R+ +C+D  AW+PP+  PAV+ QV+++ Y+ V+ NFI  ME +S FSR+N+YL+CLDE S  +   +G RCV       PV  H        VW LR+ V  CLL+AG DV+ SD+DA+WL DP  DFD  + R SSIVASRG MP  + R W +T+CMGFVLFRAG      F+  +     ++ +DQ+A+N AL KL V WD  +DMSF  ST  G G V  I     + V+LLPHN+YTR C + PI   T VAHC +  +G     WM++  LW   D
Sbjct:  124 RHASCADIVAWLPPQLQPAVVFQVVSKAYVSVQKNFISNMELHSTFSRENMYLICLDEESVESFGALGIRCVRFGCMGCPVSRH-------HVWALRIEVSVCLLKAGIDVLMSDADAVWLHDPMDDFDSDDYRDSSIVASRGAMPVPLFRTWGATICMGFVLFRAGSNAIYQFMEVVGEFTEELENDQQAVNLALQKLDVVWDPTSDMSFSDSTRSGVGVVNSIYSGESLTVSLLPHNKYTRSCRRTPISVETVVAHCISTDKGEGMATWMKEAHLWNVPD 398          
BLAST of mRNA_H-elongata_contig16289.3991.1 vs. uniprot
Match: D8LK17_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK17_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 2.330e-74
Identity = 137/311 (44.05%), Postives = 185/311 (59.49%), Query Frame = 0
Query:    1 RNGNCSDWTAWMPPRTDPAVIMQVITEGYIPVEANFIKLMEENSRFSRDNIYLMCLDEYSERAIEL-MGFRCVPVIDHLNNRNVKSVWKLRVRVLACLLEAG-YDVITSDSDALWLKDPAVD-FDLPEVRGSSIVASRGNMPRGIVRRWKSTLCMGFVLFRAG--PGMDIFLVNMERLAIKIGDDQKALNFALSKLKVDWDRATDMSFI-STDFGRGTVAEIGIN----------------------------------VTLLPHNQYTRFCDKVPIGPNTTV-AHCHAPKRGA-LKMAWMQKKGLWEYYD 269
            ++  C DW AW+PPR+ PAV+MQV++EGYI +E NFI+LME NS F+R NIYLMC+D+ S+   +  MG RCVP+   L+    + +W+LRVRV++CLLE G  DVI SD+DALWL DPA D F   +     IVASRG+ P    + W STLCMGF+LFRA    GM  FL  M  L ++  DDQ ++N A  +L + WD+ +DM +  ST +GRG +A +G +                                  VTLLPH+ YTR C +  +   TTV AHC+ P++ A +K +WM+K  LW   D
Sbjct:   32 KDATCVDWAAWIPPRSRPAVVMQVVSEGYIDIERNFIRLMERNSGFTRRNIYLMCMDDASKNFFDTKMGIRCVPM-SALDLPTHEHIWQLRVRVVSCLLEIGNVDVIMSDADALWLADPAKDLFSRGDGGRGDIVASRGSWPNDQWKEWGSTLCMGFILFRARNVAGMKRFLDVMADLVVQNKDDQISVNRAAKQLGIVWDKNSDMRYEESTGYGRGIIAGLGTSNNSTSGGGGDLFIGQTGHGVVVGRGTREVEAPFRVTLLPHSAYTRLCGRRTLSNQTTVVAHCYFPQKEAGVKTSWMKKANLWSVQD 341          
BLAST of mRNA_H-elongata_contig16289.3991.1 vs. uniprot
Match: A0A6H5KMQ8_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ8_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 3.830e-74
Identity = 126/276 (45.65%), Postives = 167/276 (60.51%), Query Frame = 0
Query:    1 RNGNCSDWTAWMPPRTDPAVIMQVITEGYIPVEANFIKLMEENSRFSRDNIYLMCLDEYSERAIELMGFRCVPVIDHLNNRNVKSVWKLRVRVLACLLEAGYDVITSDSDALWLKDPAVDFDLPEVRGSSIVASRGNMPRGIVRRWKSTLCMGFVLFRAG-PGMDIFLVNMERLAIKIGDDQKALNFALSKLKVDWDRATDMSFI-STDFGRGTVAEIGIN-----VTLLPHNQYTRFCDKVPIGPNTTVAHCHAPKRGALKMAWMQKKGLWEYYD 269
            ++ +CSD  AW+PPR+ PAV+ QV++E Y  +EANFI  ME +S FSR+N+YL+CLDE S    + +G RCV         +   VW LRV    CLL AG DV+ SD+DA+WL+DP  DF       S++VASR  MP  +  +W +T+CMGF  FRAG   M  F+  +  +  ++GDDQKA+N AL KL V WD  +DM F  ST  G G +  I  N     VTLLPHN+YTR C + PI  +T VAHC +  +G     WM++  LW   D
Sbjct:   66 KDSSCSDMLAWLPPRSSPAVVFQVVSEPYASLEANFISNMELHSTFSRENLYLVCLDEESVAIFDGLGIRCVRYGCLGCPMSRLDVWVLRVEATLCLLNAGQDVLMSDADAIWLRDPTNDFASDLNMDSNVVASRAVMPFPLYHKWGATVCMGFAFFRAGGSAMQAFMTVVGEIVNELGDDQKAVNEALDKLGVVWDPTSDMDFTNSTRPGTGVIENITANGDPLKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLWNLPD 341          
BLAST of mRNA_H-elongata_contig16289.3991.1 vs. uniprot
Match: D7FGV6_ECTSI (Acetyltransferase (Isoleucine patch superfamily protein) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV6_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 2.870e-71
Identity = 123/283 (43.46%), Postives = 172/283 (60.78%), Query Frame = 0
Query:    1 RNGNCSDWTAWMPPRTDPAVIMQVITEGYIPVEANFIKLMEENSRFSRDNIYLMCLDEYSERAIELMGFRCV-------PVIDHLNNRNVKSVWKLRVRVLACLLEAGYDVITSDSDALWLKDPAVDFDLPEVRGSSIVASRGNMPRGIVRRWKSTLCMGFVLFRAG-PGMDIFLVNMERLAIKIGDDQKALNFALSKLKVDWDRATDMSFI-STDFGRGTVAEIGIN-----VTLLPHNQYTRFCDKVPIGPNTTVAHCHAPKRGALKMAWMQKKGLWEYYD 269
            ++ +CSD  AW+PPR+ PAV+ QV++E Y  +E NFI  ME +S FSR+N+YL+CLDE S    + +G RCV       PV       +   +W LR+ V  CLL AG DV+ SD+DA+WL+DP  D        S++VASR  MP  +  +W +T+CMGF  FRAG   M  F+  +E +A ++G+DQ A+N AL+KL V WD  +DM+F  +T  G G +  I ++     VTLLPHN+YTR C + PI  +T VAHC +  +G     WM++  LW   D
Sbjct:  141 KDSSCSDMLAWLPPRSSPAVVFQVVSEPYASLEENFISNMELHSTFSRENLYLVCLDEESVAIFDGLGIRCVRYGCLGCPV-------SRGDIWVLRIDVTICLLNAGQDVLMSDADAIWLRDPTDDLASDAFLDSNVVASRAVMPFPLYHKWGATICMGFAFFRAGGSAMQAFMTVVEEIANELGNDQIAVNEALNKLDVVWDPMSDMNFTDNTRPGTGVIENITVDGGSLKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLWNLPD 416          
BLAST of mRNA_H-elongata_contig16289.3991.1 vs. uniprot
Match: A0A6H5JTX9_9PHAE (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX9_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 3.420e-38
Identity = 82/163 (50.31%), Postives = 107/163 (65.64%), Query Frame = 0
Query:   24 VITEGYIPVEANFIKLMEENSRFSRDNIYLMCLDEYSERAIEL-MGFRCVPVIDHLNNRNVKSVWKLRVRVLACLLEAGY-DVITSDSDALWLKDPAVD-FDLPEVRGSSIVASRGNMPRGIVRRWKSTLCMGFVLFRAG--PGMDIFLVNMERLAIKIGDDQ 181
            V++EGYI +E NFI+LME NS F+R NIYLMC+D  S+   +  MG RCVP+   L+    + +W+LRV+V++CLLE G+ DVI SD+DALWL DPA D F         I+ASRG+ P    + W STLCMGF++FRA    GM  FL  M  L ++  DDQ
Sbjct:    5 VVSEGYIDIERNFIRLMERNSGFTRSNIYLMCMDGASKNFFDAKMGIRCVPM-SALDLPTHQDIWQLRVKVVSCLLEVGHVDVIMSDADALWLADPAKDLFSRGGGGRGDIIASRGSWPNEQSKEWGSTLCMGFIVFRARNVAGMKRFLDVMADLVVQNKDDQ 166          
BLAST of mRNA_H-elongata_contig16289.3991.1 vs. uniprot
Match: D7FQM0_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM0_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 9.250e-37
Identity = 73/149 (48.99%), Postives = 97/149 (65.10%), Query Frame = 0
Query:   40 MEENSRFSRDNIYLMCLDEYSERAIE-LMGFRCVPVIDHLNNRNVKSVWKLRVRVLACLLEAGYDVITSDSDALWLKDPAVDFDLPEVRGSSIVASRGNMPRGIVRRWKSTLCMGFVLFRAGPG---MDIFLVNMERLAIKIGDDQKAL 184
            ME  + F+R+++YLMCLD+ S    E  MG  C+P +  LN  + + +W LRVRV++CL EAG+DVI SD+DALWL DP  DF LP V  SSIVASRG  P+ + + W +T+CMGF+LFRA      M  F+  M  L  +  DDQ A+
Sbjct:    1 MELRTSFTRNHLYLMCLDDDSLHFFESFMGIHCIP-LSGLNISSHEQIWVLRVRVVSCLAEAGHDVIMSDADALWLADPMKDFSLPGVIDSSIVASRGKKPKEVGKVWGATMCMGFILFRATANRTAMGKFVTVMNALVFESEDDQIAV 148          
BLAST of mRNA_H-elongata_contig16289.3991.1 vs. uniprot
Match: A0A7S2LCA9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LCA9_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.540e-12
Identity = 60/207 (28.99%), Postives = 98/207 (47.34%), Query Frame = 0
Query:   80 NRNVKSVWKLRVRVLACLLEA--GYDVITSDSDALWLKDPAVDFDLPEVRGSSIVASRGNMPRGIVRRWKS-----------TLCMGFVLFRAGPGMDIFLVNMERLAIKI-GDDQKALNFALSKLKVDWD--------------RATDMSFISTDFGRGTVAEIGINVTLLPHNQYTRFCDKVP-IGPNTTVAHCHAP-KRGALKM 256
            +R +  +W LR+ ++  ++      +V+ +D+DA+WLKDP   ++ P+ + S+IVASRG  P       +            T+C GF  FR  P +     N++    +   DDQ A+N  L+ L+ D +                 D S I + FG+  V    I V++LP+ Q TR C +   +  N+ VAHC+   K G  K+
Sbjct:  122 DRFLNKLWVLRLHIMQRIINTFPNLNVLYTDADAIWLKDPVQLYNHPQHQSSNIVASRGTYPEWCPLAMELHDDEKMHLNTVTICFGFTYFRNSPDLHQLAQNLQNAVARYRNDDQIAINCVLN-LQYDSNDDLHMNDPSSIAAFTQPDKSVIRSFFGK--VIAHNIKVSILPYEQVTRRCGRDEGMLENSVVAHCYTDLKEGQSKL 325          
BLAST of mRNA_H-elongata_contig16289.3991.1 vs. uniprot
Match: A0A2J7TK26_METSI (Nucleotid_trans domain-containing protein n=1 Tax=Methylocella silvestris TaxID=199596 RepID=A0A2J7TK26_METSI)

HSP 1 Score: 73.9 bits (180), Expect = 1.020e-11
Identity = 55/188 (29.26%), Postives = 94/188 (50.00%), Query Frame = 0
Query:   87 WKLRVRVLACLLEAGYDVITSDSDALWLKDPAVDFDLPEVRGSSIVASRGNM-PRGIVRRWKSTLCMGFVLFRAGPGMDIFLVNMERLAIKIGDDQKALNFALSKLKVDW---DR----ATDMSFISTDFG-RGTVAEIGINVTLLPHNQYTRFCDKVPIGPNTTVAHCHAPKRGALKMAWMQKKGLW 265
            W  R+ V+A +L AG D++ SD+DA+WL+DP           + +V ++G + P   ++R    +C G +  R+  G   F  N+  +A+ + DDQ A+N  + +    W   DR      D  F ++ F   G++ ++ I V  LPH+++ R  +   +G N  VAH  A      K+  + + GLW
Sbjct:   67 WLHRIDVIAEMLVAGDDIVHSDADAVWLRDPLARLT---ATSADLVFTQGTVFPSETLQRRGFVVCCGLMFIRSNAGAIEFWRNVRDVAVDVRDDQWAVNKVIDQSDCVWTLTDRYEAPCFDTVFHASRFIITGSMKDLAIEV--LPHHEFPRLME---LGENPFVAHPLADSPIDDKIDVLSESGLW 246          
BLAST of mRNA_H-elongata_contig16289.3991.1 vs. uniprot
Match: A0A354V5R7_9PROT (Nucleotid_trans domain-containing protein n=1 Tax=Acetobacteraceae bacterium TaxID=1909293 RepID=A0A354V5R7_9PROT)

HSP 1 Score: 73.6 bits (179), Expect = 2.420e-11
Identity = 55/186 (29.57%), Postives = 79/186 (42.47%), Query Frame = 0
Query:   97 LLEAGYDVITSDSDALWLKDPAVDFDLPEVRGSSIVASR-GNMPRGIVRRWKSTLCMGFVLFRAGPGMDIFLVNMERLAIKIGDDQKALNFALSKLKVDW----------DRATDMSFISTDFGR-------GTVAEIGINVTLLPHNQYTRFCDKVPIGPNTTVAHCHAPKRGALKMAWMQKKGL 264
            L++ GYDV+ SD+DA+WL+DP     +P +R + +   R    P  I  +W    C GF  FR G     FL    +    + DDQ  LN AL      W           R  D S + T F R       G +   G+ +  LPH+++ R         +  V H ++PK    KM  +   GL
Sbjct:  159 LVKTGYDVVMSDADAVWLRDP-----VPYLRDADVAFQRIVYHPPAIASQWGFAACGGFNAFRGGVKTTAFLERCVQENRILFDDQVVLNLALLDEDPHWHCEHPDWTLPSRQNDRSALETAFARCANAPIRGDLKTSGLQLLALPHDKFWRHAFVSTPVRDMVVCHPNSPKDDLEKMQLLDVMGL 339          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16289.3991.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5LI82_9PHAE3.750e-8147.60Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D8LSV3_ECTSI2.940e-7546.10Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D8LK17_ECTSI2.330e-7444.05Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A6H5KMQ8_9PHAE3.830e-7445.65Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D7FGV6_ECTSI2.870e-7143.46Acetyltransferase (Isoleucine patch superfamily pr... [more]
A0A6H5JTX9_9PHAE3.420e-3850.31Nucleotid_trans domain-containing protein n=1 Tax=... [more]
D7FQM0_ECTSI9.250e-3748.99Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A7S2LCA9_9STRA1.540e-1228.99Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A2J7TK26_METSI1.020e-1129.26Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A354V5R7_9PROT2.420e-1129.57Nucleotid_trans domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005069Nucleotide-diphospho-sugar transferasePFAMPF03407Nucleotid_transcoord: 49..233
e-value: 2.0E-12
score: 47.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16289contigH-elongata_contig16289:1026..1832 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16289.3991.1mRNA_H-elongata_contig16289.3991.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16289 1026..1832 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16289.3991.1 ID=prot_H-elongata_contig16289.3991.1|Name=mRNA_H-elongata_contig16289.3991.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=269bp
RNGNCSDWTAWMPPRTDPAVIMQVITEGYIPVEANFIKLMEENSRFSRDN
IYLMCLDEYSERAIELMGFRCVPVIDHLNNRNVKSVWKLRVRVLACLLEA
GYDVITSDSDALWLKDPAVDFDLPEVRGSSIVASRGNMPRGIVRRWKSTL
CMGFVLFRAGPGMDIFLVNMERLAIKIGDDQKALNFALSKLKVDWDRATD
MSFISTDFGRGTVAEIGINVTLLPHNQYTRFCDKVPIGPNTTVAHCHAPK
RGALKMAWMQKKGLWEYYD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005069Nucl-diP-sugar_transferase