prot_H-elongata_contig162823.3987.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig162823.3987.1
Unique Name	prot_H-elongata_contig162823.3987.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	94

Homology

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BLAST of mRNA_H-elongata_contig162823.3987.1 vs. uniprot
Match: D7FPL9_ECTSI (Polyribonucleotide nucleotidyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPL9_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 5.490e-47
Identity = 82/89 (92.13%), Postives = 86/89 (96.63%), Query Frame = 0

Query:    6 AHASGKIPRTANRREGRETDQEVLVARAMDRVLRPLFPPGYCFDTQMVATVQALEEGGDPVVVAINAASAALCVSNIPWDGPAGCVRIG 94
            AHA GKIPRT NRR+GRETD+EVLVARA+DRVLRPLFPPGYCFDTQ+VATVQALE GGDPVVVAINAASAALCVSNIPWDGPAGCVRIG
Sbjct:   70 AHALGKIPRTPNRRDGRETDEEVLVARAVDRVLRPLFPPGYCFDTQVVATVQALEAGGDPVVVAINAASAALCVSNIPWDGPAGCVRIG 158

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BLAST of mRNA_H-elongata_contig162823.3987.1 vs. uniprot
Match: A0A4D9CRD5_9STRA (Polyribonucleotide nucleotidyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRD5_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.310e-28
Identity = 53/94 (56.38%), Postives = 74/94 (78.72%), Query Frame = 0

Query:    1 EWWRQAHASGKIPRTANRREGRETDQEVLVARAMDRVLRPLFPPGYCFDTQMVATVQALEEGGDPVVVAINAASAALCVSNIPWDGPAGCVRIG 94
            E+  +AHA G+I R+ NRREG ++DQE+L +R +DRV+RPLFP G+ +DTQ+V TV++ +   D  V+++N ASAAL VSNIPW+GP GCVR+G
Sbjct:  147 EYREKAHAFGRINRSVNRREGAQSDQEILASRVVDRVIRPLFPEGFIYDTQVVTTVESSDRQNDLTVLSVNTASAALAVSNIPWNGPVGCVRVG 240

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BLAST of mRNA_H-elongata_contig162823.3987.1 vs. uniprot
Match: A0A8K1CU08_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU08_PYTOL)

HSP 1 Score: 111 bits (277), Expect = 1.880e-26
Identity = 52/87 (59.77%), Postives = 68/87 (78.16%), Query Frame = 0

Query:    7 HASGKIPRTANRREGRETDQEVLVARAMDRVLRPLFPPGYCFDTQMVATVQALEEGGDPVVVAINAASAALCVSNIPWDGPAGCVRI 93
            HA+G IP TA R E   TD+E+L +R +DRV+RPLFP  Y  DTQ++ATVQ+L+   DP+V+AIN+ SAAL VS+IPW+GP GCVR+
Sbjct:  170 HAAGLIPETARRNEMSGTDEEILHSRVIDRVIRPLFPRDYVDDTQVIATVQSLDPNNDPIVLAINSTSAALAVSDIPWNGPVGCVRV 256

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BLAST of mRNA_H-elongata_contig162823.3987.1 vs. uniprot
Match: A0A485LGQ5_9STRA (Polynucleotide phosphorylase 1 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LGQ5_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.650e-25
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 0

Query:    3 WRQAHAS-GKIPRTANRREGRETDQEVLVARAMDRVLRPLFPPGYCFDTQMVATVQALEEGGDPVVVAINAASAALCVSNIPWDGPAGCVRI 93
            +R+ +AS G IP +A RRE   TD+EVL +R +DR++RPLFP GY F+TQ+VATVQ+ +   DPVV+A+N+ SAAL  SNIPW+GP GCVR+
Sbjct:  135 YREKYASTGTIPGSAKRREMSGTDEEVLKSRIVDRIVRPLFPKGYNFETQLVATVQSYDVDHDPVVLAVNSTSAALTTSNIPWNGPIGCVRV 226

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BLAST of mRNA_H-elongata_contig162823.3987.1 vs. uniprot
Match: A0A2D4C0M0_PYTIN (Polyribonucleotide nucleotidyltransferase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0M0_PYTIN)

HSP 1 Score: 108 bits (270), Expect = 1.660e-25
Identity = 51/87 (58.62%), Postives = 67/87 (77.01%), Query Frame = 0

Query:    7 HASGKIPRTANRREGRETDQEVLVARAMDRVLRPLFPPGYCFDTQMVATVQALEEGGDPVVVAINAASAALCVSNIPWDGPAGCVRI 93
            HA+G IP TA R E   TD+E+L +R +DRV+RPLFP  +  DTQ++ATVQ+L+   DP+V+AIN+ SAAL +SNIPW GP GCVR+
Sbjct:  164 HAAGLIPDTARRNEMAGTDEEILQSRVLDRVIRPLFPRDFADDTQVIATVQSLDPQNDPLVLAINSTSAALAISNIPWYGPVGCVRV 250

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BLAST of mRNA_H-elongata_contig162823.3987.1 vs. uniprot
Match: A0A484E9G9_BRELC (Polyribonucleotide nucleotidyltransferase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E9G9_BRELC)

HSP 1 Score: 107 bits (266), Expect = 5.740e-25
Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = 0

Query:    6 AHASGKIPRTANRREGRETDQEVLVARAMDRVLRPLFPPGYCFDTQMVATVQALEEGGDPVVVAINAASAALCVSNIPWDGPAGCVRI 93
            +HA G IP   NRRE    D+EVL +R MDR +RPLFP  YC +TQ++ATVQ+ +   DP+VVA+N+ SAAL +S+IPW+GP GCVR+
Sbjct:  149 SHAVGLIPDNQNRREYTGNDEEVLQSRVMDRAIRPLFPRDYCENTQVLATVQSYDPNNDPLVVAVNSTSAALSISDIPWNGPIGCVRV 236

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BLAST of mRNA_H-elongata_contig162823.3987.1 vs. uniprot
Match: A0A1V9ZDA2_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZDA2_9STRA)

HSP 1 Score: 106 bits (265), Expect = 7.810e-25
Identity = 49/87 (56.32%), Postives = 66/87 (75.86%), Query Frame = 0

Query:    7 HASGKIPRTANRREGRETDQEVLVARAMDRVLRPLFPPGYCFDTQMVATVQALEEGGDPVVVAINAASAALCVSNIPWDGPAGCVRI 93
            +A+G IP +  RRE   TD E+L +R +DR++RPLFP GYC DTQ++ATVQ+ +   DPVV+A+N+ SA L  SNIPW+GP GCVR+
Sbjct:  134 YATGTIPGSVKRREMAGTDAEILKSRIVDRIVRPLFPKGYCNDTQIIATVQSYDIDHDPVVLAVNSTSATLMTSNIPWNGPIGCVRV 220

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BLAST of mRNA_H-elongata_contig162823.3987.1 vs. uniprot
Match: A0A067CF03_SAPPC (Polyribonucleotide nucleotidyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CF03_SAPPC)

HSP 1 Score: 106 bits (265), Expect = 7.820e-25
Identity = 50/86 (58.14%), Postives = 66/86 (76.74%), Query Frame = 0

Query:    8 ASGKIPRTANRREGRETDQEVLVARAMDRVLRPLFPPGYCFDTQMVATVQALEEGGDPVVVAINAASAALCVSNIPWDGPAGCVRI 93
            A+G IP    RRE   TD E+L +R +DR++RPLFP GYC +TQ++ATVQ+ +   DPVV+A+N+ASAAL  SNIPW+GP GCVR+
Sbjct:  141 ATGTIPGGVKRREMMGTDAEILKSRIVDRIVRPLFPKGYCNETQIIATVQSYDVDHDPVVLAVNSASAALTTSNIPWNGPIGCVRV 226

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BLAST of mRNA_H-elongata_contig162823.3987.1 vs. uniprot
Match: A0A2P4XSW6_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSW6_9STRA)

HSP 1 Score: 106 bits (265), Expect = 7.840e-25
Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = 0

Query:    6 AHASGKIPRTANRREGRETDQEVLVARAMDRVLRPLFPPGYCFDTQMVATVQALEEGGDPVVVAINAASAALCVSNIPWDGPAGCVRI 93
            +HA G IP    RRE    D+EVL +R +DR +RPLFP  YC DTQ++ATVQ+ +   DP+VVA+N+ASAAL +S+IPW+GP GCVR+
Sbjct:  150 SHAVGLIPDNQKRREFTGNDEEVLQSRVVDRAIRPLFPRDYCEDTQLLATVQSYDPNNDPLVVAVNSASAALSMSDIPWNGPVGCVRV 237

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BLAST of mRNA_H-elongata_contig162823.3987.1 vs. uniprot
Match: A0A225X1E6_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X1E6_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.070e-24
Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = 0

Query:    6 AHASGKIPRTANRREGRETDQEVLVARAMDRVLRPLFPPGYCFDTQMVATVQALEEGGDPVVVAINAASAALCVSNIPWDGPAGCVRI 93
            +HA G IP    RRE    D+EVL +R +DR +RPLFP  YC DTQ++ATVQ+ +   DP+VVA+N+ASAAL +S+IPW+GP GCVR+
Sbjct:  149 SHAVGLIPDNQKRREFTGNDEEVLQSRVVDRAIRPLFPRDYCEDTQVLATVQSYDPNNDPLVVAVNSASAALSMSDIPWNGPVGCVRV 236

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig162823.3987.1 vs. uniprot

BLAST of mRNA_H-elongata_contig162823.3987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FPL9_ECTSI	5.490e-47	92.13	Polyribonucleotide nucleotidyltransferase n=2 Tax=...	[more]
A0A4D9CRD5_9STRA	1.310e-28	56.38	Polyribonucleotide nucleotidyltransferase n=3 Tax=...	[more]
A0A8K1CU08_PYTOL	1.880e-26	59.77	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A485LGQ5_9STRA	1.650e-25	58.70	Polynucleotide phosphorylase 1 n=1 Tax=Aphanomyces...	[more]
A0A2D4C0M0_PYTIN	1.660e-25	58.62	Polyribonucleotide nucleotidyltransferase n=2 Tax=...	[more]
A0A484E9G9_BRELC	5.740e-25	56.82	Polyribonucleotide nucleotidyltransferase n=1 Tax=...	[more]
A0A1V9ZDA2_9STRA	7.810e-25	56.32	Polyribonucleotide nucleotidyltransferase n=1 Tax=...	[more]
A0A067CF03_SAPPC	7.820e-25	58.14	Polyribonucleotide nucleotidyltransferase n=2 Tax=...	[more]
A0A2P4XSW6_9STRA	7.840e-25	56.82	Polyribonucleotide nucleotidyltransferase n=1 Tax=...	[more]
A0A225X1E6_9STRA	1.070e-24	56.82	Polyribonucleotide nucleotidyltransferase n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001247	Exoribonuclease, phosphorolytic domain 1	PFAM	PF01138	RNase_PH	coord: 16..83 e-value: 4.5E-9 score: 36.9
IPR027408	PNPase/RNase PH domain superfamily	GENE3D	3.30.230.70		coord: 3..94 e-value: 1.8E-28 score: 101.4
IPR012162	Polyribonucleotide nucleotidyltransferase	PANTHER	PTHR11252	POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE	coord: 5..94
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 7..84

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig162823	contig	H-elongata_contig162823:157..666 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig162823.3987.1	mRNA_H-elongata_contig162823.3987.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig162823 157..666 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig162823.3987.1 ID=prot_H-elongata_contig162823.3987.1|Name=mRNA_H-elongata_contig162823.3987.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=94bp
EWWRQAHASGKIPRTANRREGRETDQEVLVARAMDRVLRPLFPPGYCFDT
QMVATVQALEEGGDPVVVAINAASAALCVSNIPWDGPAGCVRIG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001247	ExoRNase_PH_dom1
IPR027408	PNPase/RNase_PH_dom_sf
IPR012162	PNPase
IPR020568	Ribosomal_S5_D2-typ_fold