prot_H-elongata_contig162729.3979.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig162729.3979.1
Unique Nameprot_H-elongata_contig162729.3979.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length140
Homology
BLAST of mRNA_H-elongata_contig162729.3979.1 vs. uniprot
Match: D7G8A1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8A1_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 2.450e-77
Identity = 114/135 (84.44%), Postives = 123/135 (91.11%), Query Frame = 0
Query:    4 QEAAGSFALLFMVFPFNSFLGNTWSAWIQHFFAVMIMDYTNGGAQVNPAMTVGTFFYGWNDQVSLAVRILGQMVGGFYAFPIMAKLLPSYAVASMGGPTLAAGASTGQGMIWEFGSTLALMLLVYIAATQVSTTG 138
            QE  GSFALL MVFPFNSFLG+TWSAWIQHFF+VMI DYTNGGAQVNPAM+VGTFFYGWNDQ SL VRI+GQMVGGFYAFPIMAKLLPSYA +SMGGPTLAAGASTGQGM WEFGST AL+L+VY+AATQ+   G
Sbjct:   12 QETFGSFALLMMVFPFNSFLGDTWSAWIQHFFSVMITDYTNGGAQVNPAMSVGTFFYGWNDQSSLVVRIVGQMVGGFYAFPIMAKLLPSYATSSMGGPTLAAGASTGQGMAWEFGSTFALILIVYVAATQIGLPG 146          
BLAST of mRNA_H-elongata_contig162729.3979.1 vs. uniprot
Match: A0A835Z8P0_9STRA (Aquaporin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8P0_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.670e-42
Identity = 72/134 (53.73%), Postives = 91/134 (67.91%), Query Frame = 0
Query:    1 VRFQEAAGSFALLFMVFPFNSFLGNTWSAWIQHFFAVMIMDYTNGGAQVNPAMTVGTFFYGWNDQVSLAVRILGQMVGGFYAFPIMAKLLPSYAVASMGGPTLAAGASTGQGMIWEFGSTLALMLLVYIAATQV 134
            V  QE   SF +L ++FPF SFLG+TW  W  HFF VM+ D+  GG+QVNPA+++ T  YGWN   S AVRI GQ+VGG  AFP++A++LP Y    MGGP L    S   G  WEFG T AL++LVY+AATQ+
Sbjct:    8 VFLQECFASFLMLVLLFPFGSFLGDTWMGWTAHFFCVMLHDWITGGSQVNPAVSIATTLYGWNTPASAAVRIAGQLVGGLAAFPVVARVLPPYV--KMGGPMLNT-TSVADGCAWEFGLTFALLILVYVAATQI 138          
BLAST of mRNA_H-elongata_contig162729.3979.1 vs. uniprot
Match: K8YV92_NANGC (Aquaporin sip1-2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YV92_NANGC)

HSP 1 Score: 112 bits (280), Expect = 4.140e-28
Identity = 57/135 (42.22%), Postives = 82/135 (60.74%), Query Frame = 0
Query:    4 QEAAGSFALLFMVFPFNSFLGNTWSAWIQHFFAVMIMDYTNGGAQVNPAMTVGTFFYGWNDQVSLAVRILGQMVGGFYAFPIMAKLLPSYAVASMGGPTLAAGASTGQGMIWEFGSTLALMLLVYIAATQVSTTG 138
            QE  G+  +  +++PF   LG+TW+AW+ HFF VM+ D  +GG+QVNP+++V  F +G        VRIL Q+  G  A+P++ KL PSY    +GGP L  G ST  G + EF  T AL+ L+Y+A T +   G
Sbjct:   18 QEFFGALLMFLVLWPFVGVLGDTWTAWVAHFFFVMLCDIVSGGSQVNPSVSVAMFVHGAISFPGAIVRILAQLAAGVVAYPLLQKLSPSYV--GVGGPCLQDGVSTTTGALAEFTLTFALLTLIYLAITIIGAPG 150          
BLAST of mRNA_H-elongata_contig162729.3979.1 vs. uniprot
Match: A0A7S3XRL2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRL2_HETAK)

HSP 1 Score: 79.7 bits (195), Expect = 7.310e-16
Identity = 42/114 (36.84%), Postives = 67/114 (58.77%), Query Frame = 0
Query:   15 MVF-PFNSFLGNTWSAWIQHFFAVMIMDYTNGGAQVNPAMTVGTFFYGWNDQVSLAVRILGQMVGGFYAFPIMAKLLPSYAVASMGGPTLAAGASTGQGMIWEFGSTLALMLLV 127
            M+F P  +FLG++W+AWI HFF V++ D    G+QVNPA++V  + + W     L  R++GQ +     FP++    PS+   S  GP +A G +  + +  EF  T+ LML++
Sbjct:    2 MIFTPLCTFLGDSWNAWIMHFFLVILADVITVGSQVNPAVSVAIYLHDWIPFNGLCARLIGQGLAACIVFPMLGVFSPSHVPFS--GPEIAEGLAIREAITTEFLVTMGLMLVI 113          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig162729.3979.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G8A1_ECTSI2.450e-7784.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z8P0_9STRA2.670e-4253.73Aquaporin-like protein n=1 Tax=Tribonema minus Tax... [more]
K8YV92_NANGC4.140e-2842.22Aquaporin sip1-2 n=2 Tax=Monodopsidaceae TaxID=425... [more]
A0A7S3XRL2_HETAK7.310e-1636.84Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023271Aquaporin-likeGENE3D1.20.1080.10coord: 2..138
e-value: 1.7E-12
score: 49.0
IPR023271Aquaporin-likeSUPERFAMILY81338Aquaporin-likecoord: 5..131
IPR000425Major intrinsic proteinPFAMPF00230MIPcoord: 35..133
e-value: 1.9E-9
score: 37.6
IPR022357Major intrinsic protein, conserved sitePROSITEPS00221MIPcoord: 48..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..139
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availableTMHMMTMhelixcoord: 113..135
NoneNo IPR availableTMHMMTMhelixcoord: 76..98
NoneNo IPR availableTMHMMTMhelixcoord: 9..31
NoneNo IPR availableTMHMMTMhelixcoord: 46..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig162729contigH-elongata_contig162729:221..1250 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig162729.3979.1mRNA_H-elongata_contig162729.3979.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig162729 221..1250 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig162729.3979.1 ID=prot_H-elongata_contig162729.3979.1|Name=mRNA_H-elongata_contig162729.3979.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bp
VRFQEAAGSFALLFMVFPFNSFLGNTWSAWIQHFFAVMIMDYTNGGAQVN
PAMTVGTFFYGWNDQVSLAVRILGQMVGGFYAFPIMAKLLPSYAVASMGG
PTLAAGASTGQGMIWEFGSTLALMLLVYIAATQVSTTGC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023271Aquaporin-like
IPR000425MIP
IPR022357MIP_CS