prot_H-elongata_contig16262.3973.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16262.3973.1
Unique Nameprot_H-elongata_contig16262.3973.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length99
Homology
BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: A0A2I6RJN1_SACJA (GDP-L-fucose synthase n=3 Tax=Phaeophyceae TaxID=2870 RepID=A0A2I6RJN1_SACJA)

HSP 1 Score: 117 bits (293), Expect = 7.990e-30
Identity = 60/79 (75.95%), Postives = 67/79 (84.81%), Query Frame = 0
Query:    1 MSNTQG-DAQSKKVVMVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV 78
            M+ T G DA  KKVVMVTGGTGLVG GIKEFV +D EAK  EEY+FLSSK+GD+R+M +TK IFEKYKPTHVIHLAARV
Sbjct:    1 MAETSGTDAAPKKVVMVTGGTGLVGCGIKEFVESDAEAKEKEEYIFLSSKDGDIRNMEETKLIFEKYKPTHVIHLAARV 79          
BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: A0A7S1UTT3_9STRA (GDP-L-fucose synthase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UTT3_9STRA)

HSP 1 Score: 100 bits (248), Expect = 2.940e-23
Identity = 52/73 (71.23%), Postives = 60/73 (82.19%), Query Frame = 0
Query:    6 GDAQSKKVVMVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV 78
            G+A  KKVVMVTGG+GLVG GI+ FV     AK NEE+V+LSSK+GDLRD   T+AIFEKYKPTHVIHLAA+V
Sbjct:    3 GEAAGKKVVMVTGGSGLVGQGIRAFVEQSG-AKENEEWVYLSSKDGDLRDRKSTEAIFEKYKPTHVIHLAAKV 74          
BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: W7TZW1_9STRA (GDP-L-fucose synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZW1_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 6.180e-22
Identity = 46/69 (66.67%), Postives = 61/69 (88.41%), Query Frame = 0
Query:   10 SKKVVMVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV 78
            +KKVV++TGGTGLVG GI++F+++DP A+ +E YVFLSSK+GDLRD AQT AIFEK++P +V+HLAA V
Sbjct:  280 NKKVVLITGGTGLVGKGIEDFISSDPIAQESESYVFLSSKDGDLRDKAQTYAIFEKHRPAYVVHLAALV 348          
BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: A0A6T7DWV8_9STRA (GDP-L-fucose synthase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7DWV8_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.190e-21
Identity = 45/70 (64.29%), Postives = 57/70 (81.43%), Query Frame = 0
Query:    9 QSKKVVMVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV 78
            + ++VV+VTGG+GLVG GIK F+  D EA  NEE+VFLSSK+GDL+    T+AIF +YKPTHVIHLAA+V
Sbjct:   62 KKERVVLVTGGSGLVGQGIKSFIATDAEAAANEEWVFLSSKDGDLKSRTDTEAIFRRYKPTHVIHLAAKV 131          
BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: A0A4Q2DQ45_9AGAR (Epimerase domain-containing protein n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2DQ45_9AGAR)

HSP 1 Score: 89.0 bits (219), Expect = 3.730e-21
Identity = 46/76 (60.53%), Postives = 54/76 (71.05%), Query Frame = 0
Query:    8 AQSKKVVMVTGGTGLVGVGIKEFVTNDPEAKM-----NEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV 78
            A S  V++VTGGTGLVG  IK  V  +PE         E++VF SS EGDLRD AQT+A++EKYKPTHVIHLAA V
Sbjct:    2 ASSSNVILVTGGTGLVGKAIKHIVETEPEGSRFGKLPGEKWVFASSSEGDLRDPAQTRALYEKYKPTHVIHLAALV 77          
BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: A0A7S3PXQ5_9STRA (GDP-L-fucose synthase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXQ5_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 8.130e-21
Identity = 48/68 (70.59%), Postives = 56/68 (82.35%), Query Frame = 0
Query:   11 KKVVMVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV 78
            K V MVTGG+GLVG  I++FV  +P  K NEE+VFLSSK+GDLRD   T+AIFEKYKPTHVIHLAA+V
Sbjct:    4 KSVTMVTGGSGLVGSAIRDFVEANP--KENEEWVFLSSKDGDLRDRKATEAIFEKYKPTHVIHLAAKV 69          
BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: A0A6S7GHY1_PARCT (GDP-L-fucose synthase-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GHY1_PARCT)

HSP 1 Score: 89.7 bits (221), Expect = 9.790e-21
Identity = 45/68 (66.18%), Postives = 54/68 (79.41%), Query Frame = 0
Query:   11 KKVVMVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV 78
            KKV+MVTGGTGLVG  ++  +    E + NEE++FLSSK+GDL +M  TKAIFEKYKPTHVIHLAA V
Sbjct:    4 KKVIMVTGGTGLVGQAVRS-IAEAEERRENEEWIFLSSKDGDLGNMEATKAIFEKYKPTHVIHLAAMV 70          
BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: A0A836C923_9STRA (GDP-L-fucose synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C923_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.120e-20
Identity = 44/64 (68.75%), Postives = 56/64 (87.50%), Query Frame = 0
Query:   15 MVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV 78
            MVTGGTGLVG GI+E+V+ DP A+  EEY+FLSSK+G+L +MA+ +AIFEK+ PTHVIHLAA+V
Sbjct:    1 MVTGGTGLVGQGIEEWVSTDPTAQAEEEYIFLSSKDGNLLNMAECRAIFEKHAPTHVIHLAAKV 64          
BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: A0A7S2DYU3_9STRA (GDP-L-fucose synthase n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2DYU3_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.410e-20
Identity = 47/66 (71.21%), Postives = 54/66 (81.82%), Query Frame = 0
Query:   13 VVMVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV 78
            VVMVTGG+GLVG  I+ FV ++  AK NE +VFLSSK+GDLRD   T AIFEKYKPTHVIHLAA+V
Sbjct:   21 VVMVTGGSGLVGKAIEMFVKDEKNAKPNETWVFLSSKDGDLRDRKATDAIFEKYKPTHVIHLAAKV 86          
BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: UPI000644A6AA (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644A6AA)

HSP 1 Score: 92.0 bits (227), Expect = 3.170e-20
Identity = 43/69 (62.32%), Postives = 57/69 (82.61%), Query Frame = 0
Query:   10 SKKVVMVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV 78
            ++KVVMVTGGTGLVG GI+ ++    +A+ +E++V+L S +GDLR + QT+AIF KYKPTHVIHLAARV
Sbjct:    3 AQKVVMVTGGTGLVGKGIEAYIQQQGDARKDEQWVYLRSADGDLRSLEQTQAIFRKYKPTHVIHLAARV 71          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I6RJN1_SACJA7.990e-3075.95GDP-L-fucose synthase n=3 Tax=Phaeophyceae TaxID=2... [more]
A0A7S1UTT3_9STRA2.940e-2371.23GDP-L-fucose synthase n=1 Tax=Grammatophora oceani... [more]
W7TZW1_9STRA6.180e-2266.67GDP-L-fucose synthase n=2 Tax=Monodopsidaceae TaxI... [more]
A0A6T7DWV8_9STRA1.190e-2164.29GDP-L-fucose synthase n=1 Tax=Florenciella parvula... [more]
A0A4Q2DQ45_9AGAR3.730e-2160.53Epimerase domain-containing protein n=1 Tax=Candol... [more]
A0A7S3PXQ5_9STRA8.130e-2170.59GDP-L-fucose synthase n=1 Tax=Chaetoceros debilis ... [more]
A0A6S7GHY1_PARCT9.790e-2166.18GDP-L-fucose synthase-like n=1 Tax=Paramuricea cla... [more]
A0A836C923_9STRA1.120e-2068.75GDP-L-fucose synthase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2DYU3_9STRA1.410e-2071.21GDP-L-fucose synthase n=4 Tax=Lithodesmiaceae TaxI... [more]
UPI000644A6AA3.170e-2062.32hypothetical protein n=1 Tax=Acytostelium subglobo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001509NAD-dependent epimerase/dehydratasePFAMPF01370Epimerasecoord: 14..80
e-value: 2.3E-6
score: 27.3
NoneNo IPR availableGENE3D3.40.50.720coord: 14..85
e-value: 3.3E-19
score: 71.3
NoneNo IPR availablePANTHERPTHR43238FAMILY NOT NAMEDcoord: 10..78
NoneNo IPR availablePANTHERPTHR43238:SF1GDP-L-FUCOSE SYNTHASEcoord: 10..78
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 14..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16262contigH-elongata_contig16262:5553..6305 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16262.3973.1mRNA_H-elongata_contig16262.3973.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16262 5250..7662 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16262.3973.1 ID=prot_H-elongata_contig16262.3973.1|Name=mRNA_H-elongata_contig16262.3973.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp
MSNTQGDAQSKKVVMVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKE
GDLRDMAQTKAIFEKYKPTHVIHLAARVRENAQFVQCDNISWLDEISR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001509Epimerase_deHydtase
IPR036291NAD(P)-bd_dom_sf