prot_H-elongata_contig162292.3960.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig162292.3960.1
Unique Nameprot_H-elongata_contig162292.3960.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length90
Homology
BLAST of mRNA_H-elongata_contig162292.3960.1 vs. uniprot
Match: D8LRC0_ECTSI (W2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRC0_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 2.580e-54
Identity = 86/90 (95.56%), Postives = 90/90 (100.00%), Query Frame = 0
Query:    1 MPRVVGKVEGRGNGIKTVIFNIMDLSLALKRNPGEVCKFFGTELGAQTRYNEENERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPES 90
            MPRV+GKVEGRGNGIKTVIFN+MDLSLALKR+PGEVCKFFGTELGAQTRYNEE+ERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPES
Sbjct:   22 MPRVIGKVEGRGNGIKTVIFNVMDLSLALKRDPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPES 111          
BLAST of mRNA_H-elongata_contig162292.3960.1 vs. uniprot
Match: B8BW00_THAPS (W2 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW00_THAPS)

HSP 1 Score: 140 bits (353), Expect = 3.230e-38
Identity = 65/90 (72.22%), Postives = 76/90 (84.44%), Query Frame = 0
Query:    1 MPRVVGKVEGRGNGIKTVIFNIMDLSLALKRNPGEVCKFFGTELGAQTRYNEENERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPES 90
            MP V GK+EG+GNGIKTVI NI D+ L+L R+ GEV KFFG ELGAQT YN E +RA+VNGAHT+  LQQ+VHKY+ELFVLCPNCRLPE+
Sbjct:   25 MPTVYGKIEGKGNGIKTVIPNISDVGLSLHRDAGEVNKFFGCELGAQTTYNTETDRAVVNGAHTDQVLQQMVHKYIELFVLCPNCRLPET 114          
BLAST of mRNA_H-elongata_contig162292.3960.1 vs. uniprot
Match: A0A7S2KDW7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KDW7_9STRA)

HSP 1 Score: 140 bits (352), Expect = 3.650e-38
Identity = 65/90 (72.22%), Postives = 77/90 (85.56%), Query Frame = 0
Query:    1 MPRVVGKVEGRGNGIKTVIFNIMDLSLALKRNPGEVCKFFGTELGAQTRYNEENERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPES 90
            MP+VVGK+EGRGNG KTVI NI +L+L+L R+PGEV KFFGTELGAQT Y++E  RA+VNG HT+A LQQ VHKYVE FV+CPNC LPE+
Sbjct:   24 MPKVVGKLEGRGNGSKTVIVNISELALSLHRDPGEVNKFFGTELGAQTTYSDETNRAVVNGHHTDAVLQQAVHKYVEAFVICPNCGLPET 113          
BLAST of mRNA_H-elongata_contig162292.3960.1 vs. uniprot
Match: A0A7S3DU57_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DU57_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.310e-37
Identity = 63/90 (70.00%), Postives = 74/90 (82.22%), Query Frame = 0
Query:    1 MPRVVGKVEGRGNGIKTVIFNIMDLSLALKRNPGEVCKFFGTELGAQTRYNEENERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPES 90
            MP V GK+EG GNGIKTV+ NI D+  +L R PGEV KFFGTELGAQ+RY+ E +RAIVNGAHT+A LQ L++KYVE FVLCPNC LPE+
Sbjct:   26 MPAVYGKIEGSGNGIKTVVPNITDVGTSLHRAPGEVNKFFGTELGAQSRYSAETDRAIVNGAHTDAVLQDLINKYVEKFVLCPNCGLPET 115          
BLAST of mRNA_H-elongata_contig162292.3960.1 vs. uniprot
Match: A0A1Z5JLW0_FISSO (Translation initiation factor 5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLW0_FISSO)

HSP 1 Score: 137 bits (346), Expect = 3.170e-37
Identity = 60/90 (66.67%), Postives = 78/90 (86.67%), Query Frame = 0
Query:    1 MPRVVGKVEGRGNGIKTVIFNIMDLSLALKRNPGEVCKFFGTELGAQTRYNEENERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPES 90
            MP V GK+EG GNGIKTV+ N++D++ +L R PGEV KFFGTE+GAQ+RY+ + +RAIVNGAHT+ATLQ+L+H+Y+E FVLCP CRLPE+
Sbjct:   26 MPAVFGKIEGSGNGIKTVLVNVLDVANSLHREPGEVSKFFGTEMGAQSRYSADTDRAIVNGAHTDATLQELMHRYIEKFVLCPTCRLPET 115          
BLAST of mRNA_H-elongata_contig162292.3960.1 vs. uniprot
Match: A0A7S1H590_9STRA (Hypothetical protein (Fragment) n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H590_9STRA)

HSP 1 Score: 132 bits (331), Expect = 3.980e-37
Identity = 61/90 (67.78%), Postives = 73/90 (81.11%), Query Frame = 0
Query:    1 MPRVVGKVEGRGNGIKTVIFNIMDLSLALKRNPGEVCKFFGTELGAQTRYNEENERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPES 90
            MP V GK+EGRGNGIKTVI NI D++ +L R P EV KFFG ELGAQT Y  +  RA+VNGAHT+ATLQ L+H+Y+E FV+CPNCRLPE+
Sbjct:   26 MPAVFGKIEGRGNGIKTVIPNIDDVAFSLHRKPAEVNKFFGCELGAQTSYAADTSRAVVNGAHTDATLQSLMHRYIENFVICPNCRLPET 115          
BLAST of mRNA_H-elongata_contig162292.3960.1 vs. uniprot
Match: A0A7S1D9Q5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9Q5_CYCTE)

HSP 1 Score: 136 bits (343), Expect = 1.040e-36
Identity = 63/90 (70.00%), Postives = 74/90 (82.22%), Query Frame = 0
Query:    1 MPRVVGKVEGRGNGIKTVIFNIMDLSLALKRNPGEVCKFFGTELGAQTRYNEENERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPES 90
            MP V GK+EGRGNGIKTVI NI D+ L+L R  GEV KFFGTELGAQT YN + +RA+VNGAHT+ TLQ L+H+Y+E FVLCPNC LPE+
Sbjct:   26 MPAVYGKIEGRGNGIKTVIPNISDVGLSLHREAGEVTKFFGTELGAQTTYNPDTDRAVVNGAHTDDTLQDLMHRYIEKFVLCPNCSLPET 115          
BLAST of mRNA_H-elongata_contig162292.3960.1 vs. uniprot
Match: A0A7S3V5E2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5E2_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.410e-36
Identity = 62/90 (68.89%), Postives = 76/90 (84.44%), Query Frame = 0
Query:    1 MPRVVGKVEGRGNGIKTVIFNIMDLSLALKRNPGEVCKFFGTELGAQTRYNEENERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPES 90
            MP V+GK+EG+GNGIKTVI N+ DL+L+L R+PGEV KFFG E+GAQT YNE ++RA+VNGAH++  LQ  VHKYVE FVLCPNC LPE+
Sbjct:   22 MPSVMGKIEGKGNGIKTVIVNVYDLALSLHRDPGEVNKFFGCEMGAQTTYNETDDRAVVNGAHSDGELQGCVHKYVEKFVLCPNCGLPET 111          
BLAST of mRNA_H-elongata_contig162292.3960.1 vs. uniprot
Match: A0A6V2MCK3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2MCK3_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.140e-36
Identity = 62/90 (68.89%), Postives = 76/90 (84.44%), Query Frame = 0
Query:    1 MPRVVGKVEGRGNGIKTVIFNIMDLSLALKRNPGEVCKFFGTELGAQTRYNEENERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPES 90
            MP V GK+EGRGNGIKTVI NI +++L+L R PGEV KFFG ELGAQT YN + +RA+VNGAHT++ LQ +VH+Y+E FVLCPNCRLPE+
Sbjct:   25 MPTVYGKIEGRGNGIKTVIPNISEVALSLHRPPGEVNKFFGCELGAQTTYNADTDRAVVNGAHTDSVLQNMVHRYIEGFVLCPNCRLPET 114          
BLAST of mRNA_H-elongata_contig162292.3960.1 vs. uniprot
Match: B7G289_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G289_PHATC)

HSP 1 Score: 135 bits (340), Expect = 3.050e-36
Identity = 62/90 (68.89%), Postives = 75/90 (83.33%), Query Frame = 0
Query:    1 MPRVVGKVEGRGNGIKTVIFNIMDLSLALKRNPGEVCKFFGTELGAQTRYNEENERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPES 90
            MP V GK+EG GNGIKTVI NI +++L+L R PGEV KFFGTELGAQTRY+ E +RA+VNGAH +A LQ L+H+Y+E FVLCPNC LPE+
Sbjct:   26 MPAVFGKIEGSGNGIKTVIPNITEVALSLHRQPGEVNKFFGTELGAQTRYSAETDRAVVNGAHMDAVLQDLMHRYIERFVLCPNCNLPET 115          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig162292.3960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRC0_ECTSI2.580e-5495.56W2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
B8BW00_THAPS3.230e-3872.22W2 domain-containing protein n=1 Tax=Thalassiosira... [more]
A0A7S2KDW7_9STRA3.650e-3872.22Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S3DU57_9STRA1.310e-3770.00Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A1Z5JLW0_FISSO3.170e-3766.67Translation initiation factor 5 n=2 Tax=Fistulifer... [more]
A0A7S1H590_9STRA3.980e-3767.78Hypothetical protein (Fragment) n=1 Tax=Thalassion... [more]
A0A7S1D9Q5_CYCTE1.040e-3670.00Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S3V5E2_9STRA1.410e-3668.89Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A6V2MCK3_9STRA2.140e-3668.89Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B7G289_PHATC3.050e-3668.89Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002735Translation initiation factor IF2/IF5SMARTSM00653eIF2Bneu4coord: 1..90
e-value: 5.2E-17
score: 72.5
IPR002735Translation initiation factor IF2/IF5PFAMPF01873eIF-5_eIF-2Bcoord: 1..89
e-value: 8.0E-24
score: 83.8
NoneNo IPR availableGENE3D3.30.30.50coord: 5..81
e-value: 1.4E-27
score: 97.4
NoneNo IPR availablePANTHERPTHR23001EUKARYOTIC TRANSLATION INITIATION FACTORcoord: 1..89
NoneNo IPR availablePANTHERPTHR23001:SF7EUKARYOTIC TRANSLATION INITIATION FACTOR 5coord: 1..89
IPR016189Translation initiation factor IF2/IF5, N-terminalSUPERFAMILY100966Translation initiation factor 2 beta, aIF2beta, N-terminal domaincoord: 1..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig162292contigH-elongata_contig162292:64..662 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig162292.3960.1mRNA_H-elongata_contig162292.3960.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig162292 64..671 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig162292.3960.1 ID=prot_H-elongata_contig162292.3960.1|Name=mRNA_H-elongata_contig162292.3960.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=90bp
MPRVVGKVEGRGNGIKTVIFNIMDLSLALKRNPGEVCKFFGTELGAQTRY
NEENERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPES
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002735Transl_init_fac_IF2/IF5
IPR016189Transl_init_fac_IF2/IF5_N