prot_H-elongata_contig16214.3953.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16214.3953.1
Unique Nameprot_H-elongata_contig16214.3953.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length740
Homology
BLAST of mRNA_H-elongata_contig16214.3953.1 vs. uniprot
Match: A0A6H5K8R2_9PHAE (FA_FANCE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8R2_9PHAE)

HSP 1 Score: 300 bits (768), Expect = 9.150e-88
Identity = 264/719 (36.72%), Postives = 335/719 (46.59%), Query Frame = 0
Query:    1 ANSLHLAGVLEALGRDELVCAALDPVSKCYSPSPYQEQGKTRAS----EHPSLVCRSRLLGMPLADRHSAISVACCLTHRLPRRALANFLCRLVLGADVTHFKADRANRSRERM-----------RC---------CPCGQQALGTG-----DGDVEMGRADTSISSRVGGTDAA---------------------------CSSCLARRAWVDPVSARLLAVACRKLRWGRPMATDEDIALERCLNVISGILAQPPQSTSWPDLCGNEDPPHPTSCRTVPSLCARMRFSKEIQQGECSTSSARSAASTVSTEPPDAPGGTIQSRGGGKFGSASIGADAKKGTSAILARVRSQRLRCYELSSDPLEIWLGSAQRDLVVSLSLPKGXXXXXXXXTEDEGEPIKG-IPTPPVSRMVPPSTRGPSPTPISTGTVRSPGGVIPVKESGRDSAPGRPEGETSSDGKASEDMMKTSTSEAVQVAAGAADSPGTR-----------------EGSVDAVDKEGEGSCLPPTMLERLSRVAERVAEAGARGATSVDVQGAAEASVSLLQAAVMPDARATSTAHVTP-----------PWKNCPQPH--QTLGAVCEGLRLHT---SGSKESPGCGDDLVMAVCKGFVNPALSLKNCLTFVRAVLVPRARSLTAPASRLLVTAVSNIGRARPEAVIDGLILPLLCEGE-SSGVGSAQCELCTRLIKQV 628
            ANSL++A VL AL ++ELV     PV++  S S  + Q   RA+    E P L CRSRL GMPLADRH+A++VAC L H+LPRRAL NF CRL+LG D+       ++ + +              C         C CG Q   +G       ++E G A+T     V   D A                           C SCL RRAW+D  SARLL VAC KL WG+ +  DE +AL+RCL  +S +L    QS                          R R  +E ++                     A GG+  S G     +A++     +G SA+ A VR +R+     +S             +                   D G    G +P  P S    P+TRG   +  STG VR  G     +     +   R E   S  G+A                                           EG+  A D+E    CLP  + +R++ VAE+VA AGARGA S DVQGAA A+VSLL+ A    +    T+  T            P+ + P+P   Q L AVC G+ L      G+  + GCGDDLVMAVC GFV PALSL+NCL FVRAVLVPRAR+LTAPASRLLVTAVS IG+ARP  VIDGL+LPLLC G+ +S VGSAQCELCTRLIKQV
Sbjct:   54 ANSLNVAEVLHALSQEELVL----PVARSGSASCRRHQTPHRANLDSAELPQLACRSRLFGMPLADRHAALTVACSLRHKLPRRALVNFCCRLILGKDIGRLPPGSSSEAHDGSGDPPTEQIPPGACRRQGGGRGLCACGGQLFASGGKTRASPEIEGGSAETHTRHFVSPDDVAAVRGAXXXXXXXXXXXXXXXXXXXXTTCRSCLGRRAWLDLGSARLLVVACHKLLWGKALPEDEALALDRCLRALSEVLGDRDQSR-------------------------RSRSKREAEELL-------------------AGGGSSGSCGVLPVSAAAVPEGRVRGISAVRAGVRRRRIGSMTTNSXXXXXXXXXXXXXM-------------ERRSAGDAGSVSAGWVPRLPAS----PTTRG---SKNSTG-VRGVGFARATEIEPSSALADRSERAASGAGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGNNTARDEE----CLPSVLRQRVASVAEKVAAAGARGAASTDVQGAAAAAVSLLREATKLPSNTAPTSPPTTLAVDGSSSSTGPFYDRPRPQLQQPLEAVCSGVGLDIPRGKGATATAGCGDDLVMAVCDGFVTPALSLRNCLAFVRAVLVPRARALTAPASRLLVTAVSGIGKARPGVVIDGLVLPLLCGGDPASAVGSAQCELCTRLIKQV 699          
BLAST of mRNA_H-elongata_contig16214.3953.1 vs. uniprot
Match: D7FQ65_ECTSI (FA_FANCE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ65_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 5.290e-75
Identity = 141/211 (66.82%), Postives = 157/211 (74.41%), Query Frame = 0
Query:  542 MAVCKGFVNPALSLKNCLTFVRAVLVPRARSLTAPASRLLVTAVSNIGRARPEAVIDGLILPLLCEGE-SSGVGSAQCELCTRLIKQVLPKHALEAVLVGLCQPKSSRDAK----------GGSSGRRVGVAGGG--DSHGQDEKSCPLTELTMPVITAALNLKPLLSDDAIDALVRRLEAASEERHLQKSLKFTTLLHGLVTRYGPQLKP 739
            MA+C GFV PALSL+NCL FVRAVLVPRAR+L APASRLLVTAVS IG+ARP  VIDGL+LPLLC G+ +S VGSAQCELCTRLIKQ+LPK  LEAVLVGLC P     A+          GGS G     A G   D+ G   + C  TELT+PV+T ALNLKP LSD AI ALVR +EAA+E   LQKSLKFTTL+H LVTRYGPQLKP
Sbjct:    1 MAICDGFVTPALSLRNCLAFVRAVLVPRARALNAPASRLLVTAVSGIGKARPGVVIDGLVLPLLCGGDPASAVGSAQCELCTRLIKQILPKDTLEAVLVGLCGPAEDESAQTAGGWIEGPSGGSGGNGTNAAAGRRHDAAGSSSR-CVWTELTVPVMTTALNLKPALSDRAIAALVRGVEAAAERAALQKSLKFTTLIHSLVTRYGPQLKP 210          
BLAST of mRNA_H-elongata_contig16214.3953.1 vs. uniprot
Match: A0A836CB37_9STRA (FA_FANCE domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB37_9STRA)

HSP 1 Score: 125 bits (313), Expect = 7.750e-29
Identity = 79/221 (35.75%), Postives = 107/221 (48.42%), Query Frame = 0
Query:  543 AVCKGFVNPALSLKNCLTFVRAVLVPRARSLTAPASRLLVTAVSNIGRARPEAVIDGLILPLL----CEGESSGV--------------------GSAQCELCTRLIKQVLPKHALEAVLVGLCQPKSSRDAKGGSSGRRVGVAGGGDSHGQDEKSCPLTELTMPVITAALNLKPLLSDDAIDALVRRLEAASEERHLQKSLKFTTLLHGLVTRYGPQLKP 739
            AVC   V PAL L+ C  FVR  L+PRA +L+APA R LV+ V+   + RP+AV++GL++PLL      G+ S                      GSAQCEL  R  +  LP HA   ++   C P+                             C   + T+ ++T+ L +K +L D A+ AL  R+EA +E     KSLKF TLLH LV +YGPQ  P
Sbjct:    1 AVCTKAVTPALGLRACTEFVRGALLPRAAALSAPAPRTLVSGVTAAAKQRPQAVVEGLLVPLLHGDAAAGDGSAXXXXXXXXXXXXXXSGGRMAPGSAQCELLLRTARSALPPHAAAPLVAAACDPR-----------------------------CAWNDGTVALVTSLLGMKLVLDDSAVAALAGRIEAEAERAEQCKSLKFATLLHTLVLKYGPQAGP 192          
BLAST of mRNA_H-elongata_contig16214.3953.1 vs. uniprot
Match: A0A6H5KA87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA87_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 3.110e-27
Identity = 72/130 (55.38%), Postives = 85/130 (65.38%), Query Frame = 0
Query:  624 LIKQVLPKHALEAVLVGLCQPKSSRDAK--GGSSGRRVGVAGGGDSHGQDEKS------------CPLTELTMPVITAALNLKPLLSDDAIDALVRRLEAASEERHLQKSLKFTTLLHGLVTRYGPQLKP 739
            L+ ++LPK  LEAVLVGLC P     A+  GG  G   G +GGG+  G +  +            C  TELT+PV+T ALNLKP LSD AI ALVR +EAA+E   LQKSLKFTTL+H LVTRYGPQLKP
Sbjct:    9 LVWRILPKDTLEAVLVGLCGPTEDESAQTAGGWIG---GPSGGGNGTGTNAAAGRRLYAAGSSLRCVWTELTVPVMTTALNLKPALSDRAIAALVRGVEAAAERAALQKSLKFTTLIHSLVTRYGPQLKP 135          
BLAST of mRNA_H-elongata_contig16214.3953.1 vs. uniprot
Match: A0A7S2SSX3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSX3_9STRA)

HSP 1 Score: 120 bits (302), Expect = 6.540e-25
Identity = 76/225 (33.78%), Postives = 116/225 (51.56%), Query Frame = 0
Query:  516 LGAVCEGLRLHTSGSKESPGCGDDLVMAVCKGFVNPALSLKNCLTFVRAVLVPRARSLTAPASRLLVTAVSNIGRARPEAVIDGLILPLLCEGESSGVGSAQCELCTRLIKQVLPKHALEAVLVGLCQPKSSRDAKGGSSGRRVGVAGGGDSHGQDEKSCPLTELTMPVITAALNL--KPLLSDDAIDALVRRLEAASEERHLQKSLKFTTLLHGLVTRYGPQLK 738
            L AVCEG R   + S   P  GD ++M + + F  P++    C  F++ V++ +A  L  PA+R+ V+ +S + +ARPE  +   +L LLC   +  VGSAQCEL TR+IK  LP   LE +L GLC+P  +                         +SC  +++TMP++T  L    K  +S D    +V RLE   +   L+ SLK   L+H +++R+G   K
Sbjct:  346 LQAVCEGER---TWSLHLPRLGDGVLMLLAQNFTQPSIGQHACSAFLQHVMLAKALDLKKPATRVFVSTLSQMAKARPEIFVQNFLLGLLCR-PAEQVGSAQCELGTRMIKLGLPVACLEQLLCGLCRPPQA-----------------------GSRSCVWSDVTMPLVTGLLAALAKHSISSDTAAVVVDRLEMVVDTPALRSSLKLANLVHTMISRHGKHAK 543          
BLAST of mRNA_H-elongata_contig16214.3953.1 vs. uniprot
Match: A0A176VN56_MARPO (FA_FANCE domain-containing protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VN56_MARPO)

HSP 1 Score: 86.7 bits (213), Expect = 5.650e-14
Identity = 54/177 (30.51%), Postives = 93/177 (52.54%), Query Frame = 0
Query:  562 VRAVLVPRARSLTAPASRLLVTAVSNIGRARPEAVIDGLILPLLCEGESSGVGSAQCELCTRLIKQVLPKHALEAVLVGLCQPKSSRDAKGGSSGRRVGVAGGGDSHGQDEKSCPLTELTMPVITAALNLKPLLSDDAIDALVRRLEAASEERHLQKSLKFTTLLHGLVTRYGPQLK 738
            + A+++P+  +L  PASR+L+TA++  G+  P AV+D ++ P++C    +G  S QCE+  RL+K  L +  + ++L  +  P+   +                    +  +S   TE  + V+   L+ K  +  D + +LV+ L+AA  E     SLKF  LL  LVT++GP+LK
Sbjct:  380 LHAIILPKIYALEKPASRILMTALTQAGKIHPRAVMDSIMFPIICS--KNGASSVQCEILNRLVKDCLTEDLILSLLQKMFVPRRESE----------------HDFSRSNRSWNWTEGVVGVVQNLLSHKVNIDQDCVASLVQDLDAAVAE--FSTSLKFGNLLLNLVTKHGPRLK 536          
BLAST of mRNA_H-elongata_contig16214.3953.1 vs. uniprot
Match: A0A7R9Z4A9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z4A9_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.040e-13
Identity = 60/209 (28.71%), Postives = 108/209 (51.67%), Query Frame = 0
Query:  539 DLVMAVCKGFVNPALSLKNCLTFVRAVLVPRARSLTA--PASRLLVTAVSNIGRARPEAVIDGLILPLLC------EGESSG-VGSAQCELCTRLIKQVLPKHALEAVLVGLCQPKSSRDAKGGSSGRRVGVAGGGDSHGQDEKSCPLTELTMPVITAALNLKPLLSDDAIDALVRRLEAASEERHLQKSLKFTTLLHGLVTRYGPQLK 738
            +L+ ++ K  +N  +S      ++R+ ++P   +L    PASR L++  S + R RP   +  L++P LC      +G S+G    A C+L  R++K    K  +  +L GL          G  +G ++ ++GG  S          T+ ++P++T+ +N +  L D  I  L R+++      +++KS+KF+TL H LVT+YG QL+
Sbjct:  239 ELITSLSKKCINQGISAIRATAYLRSFVLPLLSNLNGSKPASRTLISTTSWLARERPSETVKALLIPSLCVPIDVRKGSSNGGPNKALCDLVGRVVKGAKEKEPIAELLTGL--------VCGDPAGVKI-ISGGSCS----SDKMVWTDESIPIMTSCINKRATLPDATISELSRQVQLLVP--NMRKSMKFSTLFHALVTKYGNQLR 432          
BLAST of mRNA_H-elongata_contig16214.3953.1 vs. uniprot
Match: B8BUU0_THAPS (FA_FANCE domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUU0_THAPS)

HSP 1 Score: 73.6 bits (179), Expect = 8.620e-10
Identity = 62/208 (29.81%), Postives = 98/208 (47.12%), Query Frame = 0
Query:  538 DDLVMAVCKGFVNPALSLKNCLTFVRAVLVPRARSLTA--PASRLLVTAVSNIGRARPEAVIDGLILPLLC-EGESSGVGSAQCELCTRLIKQVLPKHALEAVLVGLCQPK--SSRDAKGGSSGRRVGVAGGGDSHGQDEKSCPLTELTMPVITAALNLKPLLSDDAIDALVRRLE---AASEERHLQKSLKFTTLLHGLVTRYGPQL 737
            D  V ++ K ++  A        F+RA ++P    +    PASR+L + ++++ R RP   ++ +++P L  + E S     QCEL  R+++    K AL    V L   K  S+  + GG +                      T  TMP+ TAALN +P LSDD +  L  ++    +      L+K +KF+TL H  VT+YG QL
Sbjct:  447 DTTVSSLVKEYLTDATGALRANAFLRAFVLPLLLGMQGGKPASRVLTSVLASLARDRPIECVESVLVPTLTGKIEPSRF---QCELIARVLRG---KDALSVAAVALLVEKVLSTTGSTGGIN---------------------WTAHTMPLFTAALNRQPALSDDIVATLADQIAFHLSTDASPSLEKDMKFSTLFHAFVTKYGKQL 627          
BLAST of mRNA_H-elongata_contig16214.3953.1 vs. uniprot
Match: A0A669DRF5_ORENI (FA_FANCE domain-containing protein n=7 Tax=Pseudocrenilabrinae TaxID=318546 RepID=A0A669DRF5_ORENI)

HSP 1 Score: 64.3 bits (155), Expect = 5.590e-7
Identity = 52/203 (25.62%), Postives = 88/203 (43.35%), Query Frame = 0
Query:  534 PGCGDDLVMAVCKGFV--NPALSLKNCLTFVRAVLVPRARSLTAPASRLLVTAVSNIGRARPEAVIDGLILPLLCEGESSGVGSAQCELCTRLIKQVLPKHALEAVLVGLCQPKSSRDAKGGSSGRRVGVAGGGDSHGQDEKSCPLTELTMPVITAALNLKPLLSDDAIDALVRRLEAASEERHLQKSLKFTTLLHGLVTRYG 734
            PG  D  +  +C   +  +P LS     T ++++L+ +  SL+ PASR LVTAV+++    P  V   LI P+L   E   +G  Q EL +RLI+  L  H    V+                               Q       +E  + +I + L+ KP+L+++       +L   S+     KS+KF  ++  ++T+Y 
Sbjct:  341 PGLPDQALPTLCNSVLALSPDLSYSTAATLIKSLLLEKVLSLSEPASRCLVTAVTSLCSRYPRPVCQALIGPVL---EKENIGPPQAELLSRLIESCLDSHYRLLVV-------------------------------QMTLKIAWSETVLSIIHSLLDSKPVLNEELFTQFTEQL--VSQAPRFTKSVKFAKMMLTVLTKYS 507          
BLAST of mRNA_H-elongata_contig16214.3953.1 vs. uniprot
Match: A0A3Q3CEN9_HAPBU (FA complementation group E n=13 Tax=Pseudocrenilabrinae TaxID=318546 RepID=A0A3Q3CEN9_HAPBU)

HSP 1 Score: 63.9 bits (154), Expect = 7.170e-7
Identity = 52/203 (25.62%), Postives = 88/203 (43.35%), Query Frame = 0
Query:  534 PGCGDDLVMAVCKGFV--NPALSLKNCLTFVRAVLVPRARSLTAPASRLLVTAVSNIGRARPEAVIDGLILPLLCEGESSGVGSAQCELCTRLIKQVLPKHALEAVLVGLCQPKSSRDAKGGSSGRRVGVAGGGDSHGQDEKSCPLTELTMPVITAALNLKPLLSDDAIDALVRRLEAASEERHLQKSLKFTTLLHGLVTRYG 734
            PG  D  +  +C   +  +P LS     T ++++L+ +  SL+ PASR LVTAV+++    P  V   LI P+L   E   +G  Q EL +RLI+  L  H    V+                               Q       +E  + +I + L+ KP+L+++       +L   S+     KS+KF  ++  ++T+Y 
Sbjct:  324 PGLPDQALPKLCSSVLALSPDLSYSTAATLIKSLLLEKVLSLSEPASRCLVTAVTSLCSRYPRPVCQALIGPVL---EKENIGPPQAELLSRLIESCLDSHYRLLVV-------------------------------QMTLKIAWSEAVLSIIHSLLDSKPVLNEELFTQFTEQL--VSQAPRFTKSVKFAKMMLTVLTKYS 490          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16214.3953.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8R2_9PHAE9.150e-8836.72FA_FANCE domain-containing protein n=1 Tax=Ectocar... [more]
D7FQ65_ECTSI5.290e-7566.82FA_FANCE domain-containing protein n=1 Tax=Ectocar... [more]
A0A836CB37_9STRA7.750e-2935.75FA_FANCE domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KA87_9PHAE3.110e-2755.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SSX3_9STRA6.540e-2533.78Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A176VN56_MARPO5.650e-1430.51FA_FANCE domain-containing protein n=3 Tax=Marchan... [more]
A0A7R9Z4A9_9STRA2.040e-1328.71Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
B8BUU0_THAPS8.620e-1029.81FA_FANCE domain-containing protein n=1 Tax=Thalass... [more]
A0A669DRF5_ORENI5.590e-725.62FA_FANCE domain-containing protein n=7 Tax=Pseudoc... [more]
A0A3Q3CEN9_HAPBU7.170e-725.62FA complementation group E n=13 Tax=Pseudocrenilab... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021025Fanconi Anaemia group E protein, C-terminalPFAMPF11510FA_FANCEcoord: 549..627
e-value: 2.0E-9
score: 37.2
IPR039685Fanconi anemia group E proteinPANTHERPTHR32094FAMILY NOT NAMEDcoord: 536..740

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16214contigH-elongata_contig16214:4..4216 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16214.3953.1mRNA_H-elongata_contig16214.3953.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16214 2..4216 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16214.3953.1 ID=prot_H-elongata_contig16214.3953.1|Name=mRNA_H-elongata_contig16214.3953.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=740bp
ANSLHLAGVLEALGRDELVCAALDPVSKCYSPSPYQEQGKTRASEHPSLV
CRSRLLGMPLADRHSAISVACCLTHRLPRRALANFLCRLVLGADVTHFKA
DRANRSRERMRCCPCGQQALGTGDGDVEMGRADTSISSRVGGTDAACSSC
LARRAWVDPVSARLLAVACRKLRWGRPMATDEDIALERCLNVISGILAQP
PQSTSWPDLCGNEDPPHPTSCRTVPSLCARMRFSKEIQQGECSTSSARSA
ASTVSTEPPDAPGGTIQSRGGGKFGSASIGADAKKGTSAILARVRSQRLR
CYELSSDPLEIWLGSAQRDLVVSLSLPKGKGKGKRRKTEDEGEPIKGIPT
PPVSRMVPPSTRGPSPTPISTGTVRSPGGVIPVKESGRDSAPGRPEGETS
SDGKASEDMMKTSTSEAVQVAAGAADSPGTREGSVDAVDKEGEGSCLPPT
MLERLSRVAERVAEAGARGATSVDVQGAAEASVSLLQAAVMPDARATSTA
HVTPPWKNCPQPHQTLGAVCEGLRLHTSGSKESPGCGDDLVMAVCKGFVN
PALSLKNCLTFVRAVLVPRARSLTAPASRLLVTAVSNIGRARPEAVIDGL
ILPLLCEGESSGVGSAQCELCTRLIKQVLPKHALEAVLVGLCQPKSSRDA
KGGSSGRRVGVAGGGDSHGQDEKSCPLTELTMPVITAALNLKPLLSDDAI
DALVRRLEAASEERHLQKSLKFTTLLHGLVTRYGPQLKPF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021025Fanconi_anaemia_gr_E_prot_C
IPR039685FANCE