prot_H-elongata_contig162134.3951.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig162134.3951.1
Unique Nameprot_H-elongata_contig162134.3951.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length44
Homology
BLAST of mRNA_H-elongata_contig162134.3951.1 vs. uniprot
Match: A0A6H5JD09_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD09_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 5.810e-17
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    1 MEVATVALACIYLERLCLAGWVTKPNRRLAMAACLAIAYKFNE 43
            MEV+TVALACIY ERLCLAG VTKPNRRLAMAACLAIAYKFNE
Sbjct:  638 MEVSTVALACIYFERLCLAGVVTKPNRRLAMAACLAIAYKFNE 680          
BLAST of mRNA_H-elongata_contig162134.3951.1 vs. uniprot
Match: D7G4Y2_ECTSI (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y2_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 1.300e-15
Identity = 39/43 (90.70%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    1 MEVATVALACIYLERLCLAGWVTKPNRRLAMAACLAIAYKFNE 43
            MEV+TVALA IY ERLCLAG VTKPNRRLAMAACLAIAYKFNE
Sbjct:  193 MEVSTVALASIYFERLCLAGVVTKPNRRLAMAACLAIAYKFNE 235          
BLAST of mRNA_H-elongata_contig162134.3951.1 vs. uniprot
Match: A0A7S2RWQ1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RWQ1_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 7.600e-14
Identity = 33/44 (75.00%), Postives = 38/44 (86.36%), Query Frame = 0
Query:    1 MEVATVALACIYLERLCLAGWVTKPNRRLAMAACLAIAYKFNEP 44
            +E+ATVA ACIY ERLC+ G VTK NRRL+MAACL +AYKFNEP
Sbjct:  405 VEIATVAYACIYFERLCMKGLVTKANRRLSMAACLLVAYKFNEP 448          
BLAST of mRNA_H-elongata_contig162134.3951.1 vs. uniprot
Match: W4GBX8_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GBX8_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.370e-10
Identity = 27/44 (61.36%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    1 MEVATVALACIYLERLCLAGWVTKPNRRLAMAACLAIAYKFNEP 44
            ++++TVALAC+Y E+L L  +VTKPNR+L M+ACL +A KFNEP
Sbjct:  364 LDISTVALACVYFEKLVLENYVTKPNRKLYMSACLILAVKFNEP 407          
BLAST of mRNA_H-elongata_contig162134.3951.1 vs. uniprot
Match: A0A835YPH7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPH7_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 3.490e-10
Identity = 29/40 (72.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 MEVATVALACIYLERLCLAGWVTKPNRRLAMAACLAIAYK 40
            ++VA+VALAC+Y ERLCL   VTK NRRLAMAACL +AYK
Sbjct:  688 LQVASVALACVYFERLCLMALVTKANRRLAMAACLLLAYK 727          
BLAST of mRNA_H-elongata_contig162134.3951.1 vs. uniprot
Match: A0A4D9D598_9STRA (Cyclin N-terminal domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D598_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.220e-9
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    1 MEVATVALACIYLERLCLAGWVTKPNRRLAMAACLAIAYKFNE 43
            +E+ T+ALAC+Y E+LCL   VTK NRRLA AACL ++YKF E
Sbjct:  267 VELGTLALACVYFEKLCLLSLVTKSNRRLAFAACLILSYKFQE 309          
BLAST of mRNA_H-elongata_contig162134.3951.1 vs. uniprot
Match: A0A5D6Y0H5_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0H5_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.670e-9
Identity = 28/44 (63.64%), Postives = 36/44 (81.82%), Query Frame = 0
Query:    1 MEVATVALACIYLERLCLAGWVTKPNRRLAMAACLAIAYKFNEP 44
            +EVATVA+AC+Y E+L L+ +V K NR+L MAACL +A KFNEP
Sbjct:  376 LEVATVAMACVYFEKLVLSHFVNKGNRKLYMAACLLLAAKFNEP 419          
BLAST of mRNA_H-elongata_contig162134.3951.1 vs. uniprot
Match: A0A024TI98_9STRA (Cyclin N-terminal domain-containing protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TI98_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.670e-9
Identity = 26/44 (59.09%), Postives = 36/44 (81.82%), Query Frame = 0
Query:    1 MEVATVALACIYLERLCLAGWVTKPNRRLAMAACLAIAYKFNEP 44
            ++++TVALAC+Y E+L L  +VTK NR+L M+ACL +A KFNEP
Sbjct:  360 LDISTVALACVYFEKLVLENYVTKTNRKLYMSACLILAVKFNEP 403          
BLAST of mRNA_H-elongata_contig162134.3951.1 vs. uniprot
Match: A0A1Z5JZ69_FISSO (Cyclin N-terminal domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZ69_FISSO)

HSP 1 Score: 59.3 bits (142), Expect = 4.260e-9
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    1 MEVATVALACIYLERLCLAGWVTKPNRRLAMAACLAIAYKFNEP 44
            +E+ TVALAC+Y ERLCL   V K NRRL+ AACL +A K NEP
Sbjct:  604 LEIGTVALACVYFERLCLDCRVDKSNRRLSFAACLLLAAKLNEP 647          
BLAST of mRNA_H-elongata_contig162134.3951.1 vs. uniprot
Match: A0A6G0WFU6_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WFU6_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.260e-9
Identity = 26/44 (59.09%), Postives = 36/44 (81.82%), Query Frame = 0
Query:    1 MEVATVALACIYLERLCLAGWVTKPNRRLAMAACLAIAYKFNEP 44
            ++V++VALAC+Y E+L L  +VTK NR+L M+ACL +A KFNEP
Sbjct:  342 LDVSSVALACVYFEKLVLQNYVTKANRKLYMSACLLLAVKFNEP 385          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig162134.3951.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JD09_9PHAE5.810e-1793.02Cyclin N-terminal domain-containing protein n=1 Ta... [more]
D7G4Y2_ECTSI1.300e-1590.70Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A7S2RWQ1_9STRA7.600e-1475.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W4GBX8_9STRA1.370e-1061.36Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A835YPH7_9STRA3.490e-1072.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D598_9STRA1.220e-962.79Cyclin N-terminal domain-containing protein n=2 Ta... [more]
A0A5D6Y0H5_9STRA1.670e-963.64Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A024TI98_9STRA1.670e-959.09Cyclin N-terminal domain-containing protein n=4 Ta... [more]
A0A1Z5JZ69_FISSO4.260e-963.64Cyclin N-terminal domain-containing protein n=2 Ta... [more]
A0A6G0WFU6_9STRA4.260e-959.09Cyclin N-terminal domain-containing protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 1..44
e-value: 1.2E-5
score: 27.0
NoneNo IPR availablePANTHERPTHR22896:SF0CYCLIN DOMAIN-CONTAINING PROTEINcoord: 1..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..44
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.459
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 4..43
e-value: 3.5E-5
score: 23.6
IPR012388CDK5 and ABL1 enzyme substrate 1/2PANTHERPTHR22896CDK5 AND ABL1 ENZYME SUBSTRATE 1coord: 1..43
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 3..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig162134contigH-elongata_contig162134:674..805 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig162134.3951.1mRNA_H-elongata_contig162134.3951.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig162134 665..805 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig162134.3951.1 ID=prot_H-elongata_contig162134.3951.1|Name=mRNA_H-elongata_contig162134.3951.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=44bp
MEVATVALACIYLERLCLAGWVTKPNRRLAMAACLAIAYKFNEP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006671Cyclin_N
IPR012388CABLES1/2
IPR036915Cyclin-like_sf