prot_H-elongata_contig161881.3941.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig161881.3941.1
Unique Nameprot_H-elongata_contig161881.3941.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length114
Homology
BLAST of mRNA_H-elongata_contig161881.3941.1 vs. uniprot
Match: D8LTD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD1_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 1.530e-39
Identity = 70/111 (63.06%), Postives = 82/111 (73.87%), Query Frame = 0
Query:    1 MASLLTRTTLSDDSIRSLIRLRGSLPSDHRVTAWKYLLRLPGNSAAFHDLLSRGPQQTVVASFASREPVCSRKLFRKTVILLSALAHWSPIWAEVEFAIPWLFPFVLLFGQ 111
            MA L   TTLS+   RS++ LRG LP +HRVTAWK+LLRLPGNS  F  L+SRGP  T +AS + R P+  RKLFRK  +LLSALAHWSPI AEVEF   WLFPF ++FGQ
Sbjct:    1 MAYLFETTTLSEHDFRSMLHLRGGLPVEHRVTAWKFLLRLPGNSKQFAQLVSRGPHPTALASLSIRYPLRDRKLFRKAAVLLSALAHWSPILAEVEFVPSWLFPFCVVFGQ 111          
BLAST of mRNA_H-elongata_contig161881.3941.1 vs. uniprot
Match: A0A836CHE3_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHE3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 5.490e-16
Identity = 42/95 (44.21%), Postives = 55/95 (57.89%), Query Frame = 0
Query:   15 IRSLIRLRGSLPSDHRVTAWKYLLRLPGNSAAFHDLLSRGPQQTVVASFASREPVCSRKLFRKTVILLSALAHWSPIWAEVEFAIPWLFPFVLLF 109
            +R+L+R  G+ P+ HR  AW+ LL LP N AAF  L +RGP        A R P+ SR+   K   L SALAHWSP++ E E     +FPF+  F
Sbjct:   60 LRALLRAHGAFPAPHRPLAWRLLLSLPRNRAAFAALTARGPHAAAARHIAQRFPLRSRRDAAKLTALASALAHWSPVFGEAENVPAVVFPFLRAF 154          
BLAST of mRNA_H-elongata_contig161881.3941.1 vs. uniprot
Match: A0A397CIE9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CIE9_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.320e-15
Identity = 40/93 (43.01%), Postives = 57/93 (61.29%), Query Frame = 0
Query:   15 IRSLIRLRGSLPSDHRVTAWKYLLRLPGNSAAFHDLLSRGPQQTVVASFASREPVCSRKLFRKTVILLSALAHWSPIWAEVEFAIPWL-FPFV 106
            ++ L+R  G  P  +R+ AWKYLLRLP N+AA   L+++G   T  A      P+ + +LFR+   +LSALAHW P++ E    +P L FPFV
Sbjct:   16 LQHLLRSYGRFPEKYRLLAWKYLLRLPNNTAALEQLMAKGSHATT-ARLRDLYPIQNTRLFRRLERVLSALAHWCPVYGEATSIVPALVFPFV 107          
BLAST of mRNA_H-elongata_contig161881.3941.1 vs. uniprot
Match: A0A5A8D903_CAFRO (TBC1 domain family member 31 n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D903_CAFRO)

HSP 1 Score: 78.2 bits (191), Expect = 1.720e-14
Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 0
Query:    8 TTLSDDSIRSLI-RLRGSLPSDHRVTAWKYLLRLPGNSAAFHDLLSRGPQQTVVASFASREPVCSRKLFRKTVILLSALAHWSPIWAEVEFAIPWLFPFVLL 108
            + ++D S+R+L+ R  G+ P D R+ AW++LLRLPGN+ AFHDL S G Q         R P+ SR+L       +S LAHW P  A+  +   ++FPFV L
Sbjct:  925 SAVTDASLRALLQRGGGAFPDDQRLLAWRFLLRLPGNARAFHDLRSAG-QHPAFDDLGDRFPMRSRRLLSALQDTVSVLAHWCPALADAPWLPNFVFPFVKL 1025          
BLAST of mRNA_H-elongata_contig161881.3941.1 vs. uniprot
Match: A0A3R7WQ68_9STRA (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WQ68_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 3.870e-14
Identity = 39/93 (41.94%), Postives = 57/93 (61.29%), Query Frame = 0
Query:   15 IRSLIRLRGSLPSDHRVTAWKYLLRLPGNSAAFHDLLSRGPQQTVVASFASREPVCSRKLFRKTVILLSALAHWSPIWAEVEFAIPWL-FPFV 106
            ++ L+R  G  P  +R+ AWKY+LRLP N+AA   L+++G   T  A      P+ + +LFR+   +LSALAHW P++ E    +P L FPFV
Sbjct:   16 LQHLLRSYGRFPEKYRLLAWKYMLRLPNNTAALEQLMAKGSHATT-ARLRDLYPIQNTRLFRRLERVLSALAHWCPVYGEATSIVPALVFPFV 107          
BLAST of mRNA_H-elongata_contig161881.3941.1 vs. uniprot
Match: A0A6A5B309_9STRA (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5B309_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.130e-14
Identity = 39/93 (41.94%), Postives = 57/93 (61.29%), Query Frame = 0
Query:   15 IRSLIRLRGSLPSDHRVTAWKYLLRLPGNSAAFHDLLSRGPQQTVVASFASREPVCSRKLFRKTVILLSALAHWSPIWAEVEFAIPWL-FPFV 106
            ++ L+R  G  P  +R+ AWKY+LRLP N+AA   L+++G   T  A      P+ + +LFR+   +LSALAHW P++ E    +P L FPFV
Sbjct:  100 LQHLLRSYGRFPEKYRLLAWKYMLRLPNNTAALEQLMAKGSHATT-ARLRDLYPIQNTRLFRRLERVLSALAHWCPVYGEATSIVPALVFPFV 191          
BLAST of mRNA_H-elongata_contig161881.3941.1 vs. uniprot
Match: A0A397F5N5_9STRA (Rab-GAP TBC domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F5N5_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.220e-14
Identity = 40/93 (43.01%), Postives = 57/93 (61.29%), Query Frame = 0
Query:   15 IRSLIRLRGSLPSDHRVTAWKYLLRLPGNSAAFHDLLSRGPQQTVVASFASREPVCSRKLFRKTVILLSALAHWSPIWAEVEFAIPWL-FPFV 106
            ++ L+R  G  P  +R+ AWKYLLRLP N+AA   L+++G   T  A      P+ + +LFR+   +LSALAHW P++ E    +P L FPFV
Sbjct:   16 LQHLLRSYGRFPEKYRLLAWKYLLRLPNNTAALEQLMAKGSHATT-ARLRDLYPIQNIRLFRRLERVLSALAHWCPVYGEATSIVPALVFPFV 107          
BLAST of mRNA_H-elongata_contig161881.3941.1 vs. uniprot
Match: W4FZP9_9STRA (TBC1 domain family member 31 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZP9_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.330e-14
Identity = 39/93 (41.94%), Postives = 57/93 (61.29%), Query Frame = 0
Query:   15 IRSLIRLRGSLPSDHRVTAWKYLLRLPGNSAAFHDLLSRGPQQTVVASFASREPVCSRKLFRKTVILLSALAHWSPIWAEVEFAIPWL-FPFV 106
            ++ L+R  G  P  +R+ AWKY+LRLP N+AA   L+++G   T  A      P+ + +LFR+   +LSALAHW P++ E    +P L FPFV
Sbjct:  450 LQHLLRSYGRFPEKYRLLAWKYMLRLPNNTAALEQLMAKGSHATT-ARLRDLYPIQNTRLFRRLERVLSALAHWCPVYGEATSIVPALVFPFV 541          
BLAST of mRNA_H-elongata_contig161881.3941.1 vs. uniprot
Match: A0A024TWH7_9STRA (TBC1 domain family member 31 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TWH7_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 8.080e-14
Identity = 38/98 (38.78%), Postives = 58/98 (59.18%), Query Frame = 0
Query:    9 TLSDDSIRSLIRLRGSLPSDHRVTAWKYLLRLPGNSAAFHDLLSRGPQQTVVASFASREPVCSRKLFRKTVILLSALAHWSPIWAEVEFAIPWLFPFV 106
            T+    ++ L+R  G  P  +R+ AWKY+LRLP N+AAF  L+++G   T         P+ +++LFR+   +LSALAHW P++ E+       FPFV
Sbjct:  460 TVQHRRLQQLLRSYGRFPEKYRLLAWKYILRLPINTAAFEQLVAKGNHSTTTR-LHDLYPIQNQRLFRRLKRILSALAHWCPVYGELTTVPALAFPFV 556          
BLAST of mRNA_H-elongata_contig161881.3941.1 vs. uniprot
Match: A0A7K9SR47_9AVES (TBC1 domain family member 31 (Fragment) n=1 Tax=Galbula dea TaxID=1109041 RepID=A0A7K9SR47_9AVES)

HSP 1 Score: 74.7 bits (182), Expect = 2.770e-13
Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = 0
Query:   10 LSDDSIRSLIRLRGSLPSDHRVTAWKYLLRLPGNSAAFHDLLSRGPQQTVVASFASREPVCSRKLFRKTVILLSALAHWSPIWAEVEFAIPWLFPFVLLF 109
            LS + +R+L++  G  P+ +R+  W+ LL+LP N  AF +L+ +G     V +     P+ SRKL R     LSALAHWS I+AE  +     FPFV LF
Sbjct:  410 LSKERLRALLKGFGEYPAKYRMLVWRSLLQLPENHLAFSNLIDKGTHSAFV-NIQKEYPIKSRKLLRVLQRTLSALAHWSAIFAETSYIALLAFPFVKLF 508          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig161881.3941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTD1_ECTSI1.530e-3963.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CHE3_9STRA5.490e-1644.21Rab-GAP TBC domain-containing protein n=1 Tax=Trib... [more]
A0A397CIE9_9STRA1.320e-1543.01Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A5A8D903_CAFRO1.720e-1442.16TBC1 domain family member 31 n=2 Tax=Cafeteria roe... [more]
A0A3R7WQ68_9STRA3.870e-1441.94Rab-GAP TBC domain-containing protein (Fragment) n... [more]
A0A6A5B309_9STRA4.130e-1441.94Rab-GAP TBC domain-containing protein (Fragment) n... [more]
A0A397F5N5_9STRA4.220e-1443.01Rab-GAP TBC domain-containing protein n=6 Tax=Apha... [more]
W4FZP9_9STRA4.330e-1441.94TBC1 domain family member 31 n=2 Tax=Aphanomyces a... [more]
A0A024TWH7_9STRA8.080e-1438.78TBC1 domain family member 31 n=2 Tax=Aphanomyces i... [more]
A0A7K9SR47_9AVES2.770e-1341.00TBC1 domain family member 31 (Fragment) n=1 Tax=Ga... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR19853:SF1TBC1 DOMAIN FAMILY MEMBER 31coord: 10..111
NoneNo IPR availablePANTHERPTHR19853WD REPEAT CONTAINING PROTEIN 3 WDR3coord: 10..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig161881contigH-elongata_contig161881:493..834 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig161881.3941.1mRNA_H-elongata_contig161881.3941.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig161881 493..1069 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig161881.3941.1 ID=prot_H-elongata_contig161881.3941.1|Name=mRNA_H-elongata_contig161881.3941.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp
MASLLTRTTLSDDSIRSLIRLRGSLPSDHRVTAWKYLLRLPGNSAAFHDL
LSRGPQQTVVASFASREPVCSRKLFRKTVILLSALAHWSPIWAEVEFAIP
WLFPFVLLFGQVN*
back to top