prot_H-elongata_contig161618.3931.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig161618.3931.1
Unique Name	prot_H-elongata_contig161618.3931.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	92

Homology

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BLAST of mRNA_H-elongata_contig161618.3931.1 vs. uniprot
Match: A0A6H5JGP1_9PHAE (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP1_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 2.070e-53
Identity = 87/89 (97.75%), Postives = 89/89 (100.00%), Query Frame = 0

Query:    1 YLDSEDSTKPIYLYVNCPGGSVIAGLAMFDTMQHIRSEVVTINVGIAASMASFILAAGAKGKRMALPHSRVMIHQPMGGAQGQAEDIKV 89
            YLDSEDSTKPIYLYVNCPGGSVIAGLA+FDTMQHIRSEVVTINVG+AASMASFILAAGAKGKRMALPHSRVMIHQPMGGAQGQAEDIKV
Sbjct:   93 YLDSEDSTKPIYLYVNCPGGSVIAGLALFDTMQHIRSEVVTINVGLAASMASFILAAGAKGKRMALPHSRVMIHQPMGGAQGQAEDIKV 181

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BLAST of mRNA_H-elongata_contig161618.3931.1 vs. uniprot
Match: A0A835Z885_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z885_9STRA)

HSP 1 Score: 169 bits (427), Expect = 1.100e-50
Identity = 81/89 (91.01%), Postives = 89/89 (100.00%), Query Frame = 0

Query:    1 YLDSEDSTKPIYLYVNCPGGSVIAGLAMFDTMQHIRSEVVTINVGIAASMASFILAAGAKGKRMALPHSRVMIHQPMGGAQGQAEDIKV 89
            YLDSEDSTKPIY+YVNCPGGSVIAGLA++DTMQHI+SEV+TIN+G+AASMASF+LAAGAKGKRMALPHSRVMIHQPMGGAQGQAEDIKV
Sbjct:  117 YLDSEDSTKPIYMYVNCPGGSVIAGLAIYDTMQHIKSEVITINMGMAASMASFLLAAGAKGKRMALPHSRVMIHQPMGGAQGQAEDIKV 205

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BLAST of mRNA_H-elongata_contig161618.3931.1 vs. uniprot
Match: A0A0G4F8U0_VITBC (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F8U0_VITBC)

HSP 1 Score: 165 bits (417), Expect = 1.050e-48
Identity = 79/89 (88.76%), Postives = 87/89 (97.75%), Query Frame = 0

Query:    1 YLDSEDSTKPIYLYVNCPGGSVIAGLAMFDTMQHIRSEVVTINVGIAASMASFILAAGAKGKRMALPHSRVMIHQPMGGAQGQAEDIKV 89
            YLDSEDSTKPIY+Y+NCPGGSVIAGLA++DTMQHI+SEVVTINVG++ASMASF+LAAG KGKR ALPHSRVMIHQPMGGAQGQAEDIKV
Sbjct:  144 YLDSEDSTKPIYIYMNCPGGSVIAGLAIYDTMQHIKSEVVTINVGLSASMASFLLAAGTKGKRFALPHSRVMIHQPMGGAQGQAEDIKV 232

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BLAST of mRNA_H-elongata_contig161618.3931.1 vs. uniprot
Match: A0A0G4GFY1_9ALVE (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GFY1_9ALVE)

HSP 1 Score: 161 bits (408), Expect = 1.230e-47
Identity = 76/92 (82.61%), Postives = 87/92 (94.57%), Query Frame = 0

Query:    1 YLDSEDSTKPIYLYVNCPGGSVIAGLAMFDTMQHIRSEVVTINVGIAASMASFILAAGAKGKRMALPHSRVMIHQPMGGAQGQAEDIKVRCR 92
            YLDSEDSTKPIYLY+NCPGGSVIAGLA++DTMQH++SEVVTINVG++ASMASF+LA GAKGKR ALPHSRVMIHQPMGGA+GQ EDI+V  +
Sbjct:  109 YLDSEDSTKPIYLYLNCPGGSVIAGLAIYDTMQHVKSEVVTINVGLSASMASFLLAGGAKGKRFALPHSRVMIHQPMGGARGQTEDIRVEAQ 200

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BLAST of mRNA_H-elongata_contig161618.3931.1 vs. uniprot
Match: A0A7S1TU42_9STRA (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU42_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.420e-47
Identity = 76/89 (85.39%), Postives = 87/89 (97.75%), Query Frame = 0

Query:    1 YLDSEDSTKPIYLYVNCPGGSVIAGLAMFDTMQHIRSEVVTINVGIAASMASFILAAGAKGKRMALPHSRVMIHQPMGGAQGQAEDIKV 89
            YLDSED  KPIY+Y+NCPGGSVIAG+A++DTMQHI+++VVTINVGI+ASMASF+LAAGAKGKR+ALPHSRVMIHQPMGGAQGQAEDIKV
Sbjct:  105 YLDSEDPDKPIYMYLNCPGGSVIAGMAIYDTMQHIKADVVTINVGISASMASFLLAAGAKGKRLALPHSRVMIHQPMGGAQGQAEDIKV 193

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BLAST of mRNA_H-elongata_contig161618.3931.1 vs. uniprot
Match: J7G5H7_9CRYP (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chroomonas mesostigmatica CCMP1168 TaxID=1195612 RepID=J7G5H7_9CRYP)

HSP 1 Score: 159 bits (402), Expect = 3.000e-47
Identity = 76/92 (82.61%), Postives = 87/92 (94.57%), Query Frame = 0

Query:    1 YLDSEDSTKPIYLYVNCPGGSVIAGLAMFDTMQHIRSEVVTINVGIAASMASFILAAGAKGKRMALPHSRVMIHQPMGGAQGQAEDIKVRCR 92
            YLDSED++KPIYLY+N PGGSVI+GLAM+DTM+HI+SEVVTINVG+AASMASFILAAG KGKR+ALPHSR+MIHQPMGGAQGQA DIKV  +
Sbjct:   91 YLDSEDNSKPIYLYINSPGGSVISGLAMYDTMRHIKSEVVTINVGLAASMASFILAAGEKGKRLALPHSRIMIHQPMGGAQGQASDIKVEAQ 182

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BLAST of mRNA_H-elongata_contig161618.3931.1 vs. uniprot
Match: A0A7S1GRK0_CYCTE (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GRK0_CYCTE)

HSP 1 Score: 160 bits (404), Expect = 3.280e-47
Identity = 76/89 (85.39%), Postives = 87/89 (97.75%), Query Frame = 0

Query:    1 YLDSEDSTKPIYLYVNCPGGSVIAGLAMFDTMQHIRSEVVTINVGIAASMASFILAAGAKGKRMALPHSRVMIHQPMGGAQGQAEDIKV 89
            YLDSEDSTKPIYLY+NCPGGSVI+GLA++D MQHI SEV+TIN+G+AASMASFILAAG++GKR+ALP+SRVMIHQPMGGAQGQAEDIKV
Sbjct:  114 YLDSEDSTKPIYLYINCPGGSVISGLAIYDAMQHISSEVITINLGLAASMASFILAAGSRGKRLALPNSRVMIHQPMGGAQGQAEDIKV 202

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BLAST of mRNA_H-elongata_contig161618.3931.1 vs. uniprot
Match: A0A7S0KYD1_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KYD1_9STRA)

HSP 1 Score: 159 bits (403), Expect = 5.030e-47
Identity = 75/89 (84.27%), Postives = 87/89 (97.75%), Query Frame = 0

Query:    1 YLDSEDSTKPIYLYVNCPGGSVIAGLAMFDTMQHIRSEVVTINVGIAASMASFILAAGAKGKRMALPHSRVMIHQPMGGAQGQAEDIKV 89
            YLDSEDS+KPIYLY+NCPGGSVI+GLA+FD MQHI+SEV+TIN+G+AASMASFI+AAG+KGKR+ALP SR+MIHQPMGGAQGQAEDIKV
Sbjct:  115 YLDSEDSSKPIYLYINCPGGSVISGLAIFDCMQHIKSEVITINLGLAASMASFIMAAGSKGKRLALPSSRIMIHQPMGGAQGQAEDIKV 203

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BLAST of mRNA_H-elongata_contig161618.3931.1 vs. uniprot
Match: F0YKH8_AURAN (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YKH8_AURAN)

HSP 1 Score: 157 bits (396), Expect = 8.250e-47
Identity = 74/89 (83.15%), Postives = 84/89 (94.38%), Query Frame = 0

Query:    1 YLDSEDSTKPIYLYVNCPGGSVIAGLAMFDTMQHIRSEVVTINVGIAASMASFILAAGAKGKRMALPHSRVMIHQPMGGAQGQAEDIKV 89
            YLDSEDSTKPIYLY+NCPGGSVIAGLA+FDTM HI+S+VVTIN+G++ASMASF+L  G KG R+ALP+SRVMIHQPMGGAQGQAEDIKV
Sbjct:   53 YLDSEDSTKPIYLYINCPGGSVIAGLAIFDTMNHIKSKVVTINIGLSASMASFLLCGGTKGSRLALPNSRVMIHQPMGGAQGQAEDIKV 141

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BLAST of mRNA_H-elongata_contig161618.3931.1 vs. uniprot
Match: A9BKW1_HEMAN (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BKW1_HEMAN)

HSP 1 Score: 157 bits (398), Expect = 1.170e-46
Identity = 75/92 (81.52%), Postives = 87/92 (94.57%), Query Frame = 0

Query:    1 YLDSEDSTKPIYLYVNCPGGSVIAGLAMFDTMQHIRSEVVTINVGIAASMASFILAAGAKGKRMALPHSRVMIHQPMGGAQGQAEDIKVRCR 92
            YLDSED++KPIYLY+N PGGSVI+GLAM+DT++HI+SEVVTINVG+AASMASFILAAG KGKR+ALPHSR+MIHQPMGGAQGQA DIKV  +
Sbjct:   88 YLDSEDNSKPIYLYINSPGGSVISGLAMYDTIRHIKSEVVTINVGLAASMASFILAAGEKGKRLALPHSRIMIHQPMGGAQGQASDIKVEAQ 179

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig161618.3931.1 vs. uniprot

BLAST of mRNA_H-elongata_contig161618.3931.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JGP1_9PHAE	2.070e-53	97.75	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A835Z885_9STRA	1.100e-50	91.01	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A0G4F8U0_VITBC	1.050e-48	88.76	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A0G4GFY1_9ALVE	1.230e-47	82.61	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A7S1TU42_9STRA	1.420e-47	85.39	ATP-dependent Clp protease proteolytic subunit n=2...	[more]
J7G5H7_9CRYP	3.000e-47	82.61	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A7S1GRK0_CYCTE	3.280e-47	85.39	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A7S0KYD1_9STRA	5.030e-47	84.27	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
F0YKH8_AURAN	8.250e-47	83.15	ATP-dependent Clp protease proteolytic subunit n=2...	[more]
A9BKW1_HEMAN	1.170e-46	81.52	ATP-dependent Clp protease proteolytic subunit n=1...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 10..30 score: 54.64 coord: 62..81 score: 62.75 coord: 41..58 score: 59.58
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 1..90 e-value: 6.1E-42 score: 143.6
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 1..89
None	No IPR available	GENE3D	3.90.226.10		coord: 1..92 e-value: 3.9E-39 score: 136.3
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 30..40
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..29
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 41..59
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 60..92
None	No IPR available	TMHMM	TMhelix		coord: 39..61
None	No IPR available	TMHMM	TMhelix		coord: 12..29
IPR033135	ClpP, histidine active site	PROSITE	PS00382	CLP_PROTEASE_HIS	coord: 63..76
IPR018215	ClpP, Ser active site	PROSITE	PS00381	CLP_PROTEASE_SER	coord: 41..52
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 1..89

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig161618	contig	H-elongata_contig161618:413..1277 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig161618.3931.1	mRNA_H-elongata_contig161618.3931.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig161618 413..1277 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig161618.3931.1 ID=prot_H-elongata_contig161618.3931.1|Name=mRNA_H-elongata_contig161618.3931.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp
YLDSEDSTKPIYLYVNCPGGSVIAGLAMFDTMQHIRSEVVTINVGIAASM
ASFILAAGAKGKRMALPHSRVMIHQPMGGAQGQAEDIKVRCR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001907	ClpP
IPR023562	ClpP/TepA
IPR033135	ClpP_His_AS
IPR018215	ClpP_Ser_AS
IPR029045	ClpP/crotonase-like_dom_sf