prot_H-elongata_contig161211.3912.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig161211.3912.1
Unique Nameprot_H-elongata_contig161211.3912.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length176
Homology
BLAST of mRNA_H-elongata_contig161211.3912.1 vs. uniprot
Match: A0A6H5JBD7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD7_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 1.310e-33
Identity = 79/179 (44.13%), Postives = 107/179 (59.78%), Query Frame = 0
Query:    1 MAVDGKHGVERALDVFNVYDRLGYDVIGLQETRRSGHSVFNQAGYLGYCSG-ECGGENG--LAIRTSITRTAR-PPEFISDRLLKVTLELRGRAKAITFFVAYAPIETQNVSNKHAFWTSLDRAVEEVPRHEHLFVLMDANARTGMREKGQVGSKDSKIIGAYGRDTLNDNGELLLSFA 175
            +AV G +G  RA  V +   R    V+G+QETRR+G + F  AG+  +C G E GG +G  +A++ S+ +T+    EFI +RL+ + L L G   A+ F  A AP E    S+K  FW  LD  V  +P  E ++VL+DANARTG R  G     D ++IG YGRD LNDNG LLL+FA
Sbjct:   68 LAVIGVNGYGRAYSVLHEAARQDVSVVGMQETRRAGRTEFAAAGFRVFCCGTETGGVHGVGIAVKESLCKTSTFTTEFIDERLMAMRLLLAGHRGAVNFVAASAPTEPSTASSKRVFWGKLDSLVRRIPSKECVYVLLDANARTGDRLDGG----DGRVIGMYGRDELNDNGMLLLNFA 242          
BLAST of mRNA_H-elongata_contig161211.3912.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 2.280e-32
Identity = 84/195 (43.08%), Postives = 110/195 (56.41%), Query Frame = 0
Query:    1 MAVDGKHGV-ERALDVFNVYDRLGYDVIGLQETRRSGHSVFNQAGYLGYCSGECGGEN--------GLAIRT----SITRTARPPEFISDRLLKVTLELRGRAKAITFFVAYAPIETQ------NVSNKHAFWTSLDRAVEEVPRHEHLFVLMDANARTGMREKGQVGSKDSKIIGAYGRDTLNDNGELLLSFAN 176
            +A  G++ +    + V  +    G DVIGLQETRR+G       GY+   SG   G          G+AI+     S+    R  E IS RL+KV L++ GR   +TF V YAP ET       +V+ K +FWT+LD A+ EV   +HL VLMDANARTG R KG     D+KI+GAYGRD +N+NGE LL  A+
Sbjct:  185 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKGCC---DAKIMGAYGRDIMNNNGERLLGLAS 375          
BLAST of mRNA_H-elongata_contig161211.3912.1 vs. uniprot
Match: A0A6H5KQ63_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ63_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 8.000e-32
Identity = 81/182 (44.51%), Postives = 102/182 (56.04%), Query Frame = 0
Query:   13 LDVFNVYDRLGYDVIGLQETRRSGHSVFNQAGYLGYCSGECGGENG--------LAIRT----SITRTARPPEFISDRLLKVTLELRGRAKAITFFVAYAPIETQ------NVSNKHAFWTSLDRAVEEVPRHEHLFVLMDANARTGMREKGQVGSKDSKIIGAYGRDTLNDNGELLLSFAN 176
            + V  +    G DVIGLQETRR G       GY+   SG   G  G        +AI+     S+    R  E IS RL+KV L++ GR   +TF V YAP ET       +V+ K +FWT+LD A+ EV   +HL VLMDANARTG R  G     D+KI+GAYGRD +N+NGE LL  A+
Sbjct:    1 MTVMQICSATGCDVIGLQETRREGQGSIAHDGYVFIWSGARAGTKGKWGVHGVGIAIKEAMWQSVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCC---DAKIMGAYGRDIMNNNGERLLGLAS 178          
BLAST of mRNA_H-elongata_contig161211.3912.1 vs. uniprot
Match: A0A6H5KQZ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ7_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 8.200e-32
Identity = 69/179 (38.55%), Postives = 107/179 (59.78%), Query Frame = 0
Query:    1 MAVDGKHGVERALDVFNVYDRLGYDVIGLQETRRSGHSVFNQAGYLGY-CSGECGGENG--LAIRTSITRTAR-PPEFISDRLLKVTLELRGRAKAITFFVAYAPIETQNVSNKHAFWTSLDRAVEEVPRHEHLFVLMDANARTGMREKGQVGSKDSKIIGAYGRDTLNDNGELLLSFA 175
            +AV+G +G  RA  V +   + G   +GLQE RR G + F  +G+  + C  + GG +G  +A+  ++ ++++   E++ +RL+ +  E+ G   A+TF  AYAP +     +KH FW  LD  V   P  E+LFVLMDANA+TG    G +  ++ + +G YGR+ LNDNG LLL+FA
Sbjct:   84 LAVNGANGYGRADSVLHEAAKQGISFVGLQEVRRPGRTEFAASGFRVFTCGTDKGGTHGVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTG----GGIAGENERTMGEYGRNELNDNGRLLLTFA 258          
BLAST of mRNA_H-elongata_contig161211.3912.1 vs. uniprot
Match: A0A6H5KP87_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP87_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 8.470e-32
Identity = 78/169 (46.15%), Postives = 97/169 (57.40%), Query Frame = 0
Query:   25 DVIGLQETRRSGHSVFNQAGYLGYCSGECGGEN--------GLAIRT----SITRTARPPEFISDRLLKVTLELRGRAKAITFFVAYAPIETQ------NVSNKHAFWTSLDRAVEEVPRHEHLFVLMDANARTGMREKGQVGSKDSKIIGAYGRDTLNDNGELLLSFA 175
            DVIGLQETRR+G       GY+   SG   G          G+AI+     S+    R  E IS RL+KV L++ GR   +TF V YAP ET       +V+ K +FWT+LD  + EV   +HL VLMDANARTG R  G     D+KI+GAYGRD +N+NGE LL  A
Sbjct:   13 DVIGLQETRRAGQGAITHDGYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCC---DAKIMGAYGRDIMNNNGERLLGLA 177          
BLAST of mRNA_H-elongata_contig161211.3912.1 vs. uniprot
Match: A0A6H5K319_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K319_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 1.080e-31
Identity = 69/179 (38.55%), Postives = 108/179 (60.34%), Query Frame = 0
Query:    1 MAVDGKHGVERALDVFNVYDRLGYDVIGLQETRRSGHSVFNQAGYLGY-CSGECGGENG--LAIRTSITRTAR-PPEFISDRLLKVTLELRGRAKAITFFVAYAPIETQNVSNKHAFWTSLDRAVEEVPRHEHLFVLMDANARTGMREKGQVGSKDSKIIGAYGRDTLNDNGELLLSFA 175
            +AV+G +G  RA  V +   + G   +GLQE RR G + F  +G+  + C  + GG +G  +A+  ++ ++++   E++ +RL+ +  E+ G   A+TF  AYAP +     +KH FW  LD  V  +P  E+LFVLMDANA+TG    G +  ++   +G YGR+ LN+NGELLL+FA
Sbjct:  316 LAVNGANGYGRADSVLHEAAKQGISFVGLQEVRRPGRTEFAASGFRVFTCGTDKGGTHGVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRIPAKEYLFVLMDANAQTG----GGIAGENEGTMGEYGRNELNENGELLLTFA 490          
BLAST of mRNA_H-elongata_contig161211.3912.1 vs. uniprot
Match: A0A6H5L660_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L660_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 2.070e-31
Identity = 81/195 (41.54%), Postives = 105/195 (53.85%), Query Frame = 0
Query:    1 MAVDGKHGV-ERALDVFNVYDRLGYDVIGLQETRRSGHSVFNQAGYLGYCSGECGGEN--------GLAIRT----SITRTARPPEFISDRLLKVTLELRGRAKAITFFVAYAPIETQ------NVSNKHAFWTSLDRAVEEVPRHEHLFVLMDANARTGMREKGQVGSKDSKIIGAYGRDTLNDNGELLLSFAN 176
            +A  G++ +    + V  +    G DVIGLQETRR G       GY+   SG   G          G+AI+     S+    R  E I  RL+KV L + GR   ITF V YAP ET       +++ K +FWT+LD  + EV  H+HL VLMDANARTG R  G     D+KI+G YGRD +N+NGE LL  A+
Sbjct:  158 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKETMWESVGEEGRKVECIGPRLMKVRLRI-GRTCGITFVVRYAPTETVRTTAGGDINAKDSFWTALDAVIREVHSHDHLVVLMDANARTGRRRDGCC---DAKIMGVYGRDIMNNNGERLLGLAS 348          
BLAST of mRNA_H-elongata_contig161211.3912.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 2.300e-31
Identity = 79/182 (43.41%), Postives = 101/182 (55.49%), Query Frame = 0
Query:   13 LDVFNVYDRLGYDVIGLQETRRSGHSVFNQAGYLGYCSGECGGEN--------GLAIRT----SITRTARPPEFISDRLLKVTLELRGRAKAITFFVAYAPIETQ------NVSNKHAFWTSLDRAVEEVPRHEHLFVLMDANARTGMREKGQVGSKDSKIIGAYGRDTLNDNGELLLSFAN 176
            + V  +    G DVIGLQETRR G       GY+   SG   G          G+AI+     S+    R  E IS RL+KV L++ GR   +TF V YAP ET       +V+ K +FWT+LD A+ EV   +HL VLMDANARTG R  G     D+K++GAYGRD +N+NGE L   A+
Sbjct:    1 MTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRGGCC---DAKVLGAYGRDIMNNNGERLFGLAS 178          
BLAST of mRNA_H-elongata_contig161211.3912.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 2.620e-31
Identity = 83/195 (42.56%), Postives = 109/195 (55.90%), Query Frame = 0
Query:    1 MAVDGKHGV-ERALDVFNVYDRLGYDVIGLQETRRSGHSVFNQAGYLGYCSGECGGEN--------GLAIRT----SITRTARPPEFISDRLLKVTLELRGRAKAITFFVAYAPIETQ------NVSNKHAFWTSLDRAVEEVPRHEHLFVLMDANARTGMREKGQVGSKDSKIIGAYGRDTLNDNGELLLSFAN 176
            +A  G++ +    + V  +    G DVIGLQETRR+G       GY+   SG   G          G+AI+     S+    R  E IS RL+KV L++ GR   +TF V YAP ET       +V+ K +FWT+LD A+ EV   +HL VLMDANARTG R  G     D+KI+GAYGRD +N+NGE LL  A+
Sbjct:   96 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCC---DAKIMGAYGRDIMNNNGERLLGLAS 286          
BLAST of mRNA_H-elongata_contig161211.3912.1 vs. uniprot
Match: A0A6H5K7U5_9PHAE (Reverse transcriptase domain-containing protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U5_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 2.660e-31
Identity = 69/179 (38.55%), Postives = 107/179 (59.78%), Query Frame = 0
Query:    1 MAVDGKHGVERALDVFNVYDRLGYDVIGLQETRRSGHSVFNQAGYLGY-CSGECGGENG--LAIRTSITRTAR-PPEFISDRLLKVTLELRGRAKAITFFVAYAPIETQNVSNKHAFWTSLDRAVEEVPRHEHLFVLMDANARTGMREKGQVGSKDSKIIGAYGRDTLNDNGELLLSFA 175
            +AV+G +G  RA  V +   + G   +GLQE RR G + F  +G+  + C  + GG +G  +A+  ++ ++++   E++ +RL+ +  E+ G   A+TF  AYAP +     +KH FW  LD  V   P  E+LFVLMDANA+TG    G +  ++   +G YGR+ LN+NGELLL+FA
Sbjct:   29 LAVNGANGYGRADSVLHEAAKQGISFVGLQEVRRPGRTEFAASGFRVFTCGTDKGGTHGVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTG----GGIAGENEGTMGEYGRNELNENGELLLTFA 203          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig161211.3912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBD7_9PHAE1.310e-3344.13Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K3Q1_9PHAE2.280e-3243.08Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KQ63_9PHAE8.000e-3244.51Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KQZ7_9PHAE8.200e-3238.55Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KP87_9PHAE8.470e-3246.15Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K319_9PHAE1.080e-3138.55Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L660_9PHAE2.070e-3141.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBZ6_9PHAE2.300e-3143.41Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5JMB4_9PHAE2.620e-3142.56Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K7U5_9PHAE2.660e-3138.55Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 6..176
e-value: 5.4E-13
score: 50.9
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 15..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig161211contigH-elongata_contig161211:23..577 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig161211.3912.1mRNA_H-elongata_contig161211.3912.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig161211 23..607 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig161211.3912.1 ID=prot_H-elongata_contig161211.3912.1|Name=mRNA_H-elongata_contig161211.3912.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=176bp
MAVDGKHGVERALDVFNVYDRLGYDVIGLQETRRSGHSVFNQAGYLGYCS
GECGGENGLAIRTSITRTARPPEFISDRLLKVTLELRGRAKAITFFVAYA
PIETQNVSNKHAFWTSLDRAVEEVPRHEHLFVLMDANARTGMREKGQVGS
KDSKIIGAYGRDTLNDNGELLLSFAN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf