prot_H-elongata_contig160960.3901.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig160960.3901.1
Unique Nameprot_H-elongata_contig160960.3901.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length64
Homology
BLAST of mRNA_H-elongata_contig160960.3901.1 vs. uniprot
Match: A0A6H5LCC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCC1_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 2.110e-30
Identity = 53/60 (88.33%), Postives = 57/60 (95.00%), Query Frame = 0
Query:    1 MGLGKTLQSISILAYIHERMGVSGPHVILVPKSTLSNWLNELKRWCPVLRPLRFHGTKAS 60
            MGLGKTLQSIS+LAY+HE  GVSGPH+ILVPKSTLSNWLNELKRWCP LRPLRFHGT+AS
Sbjct:  292 MGLGKTLQSISVLAYMHEYKGVSGPHIILVPKSTLSNWLNELKRWCPALRPLRFHGTRAS 351          
BLAST of mRNA_H-elongata_contig160960.3901.1 vs. uniprot
Match: D7FV68_ECTSI (Probable chromatin remodelling complex ATPase chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV68_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 6.940e-29
Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 0
Query:    1 MGLGKTLQSISILAYIHERMGVSGPHVILVPKSTLSNWLNELKRWCPVLRPLRFHGTKASRQNI 64
            MGLGKTLQSIS+LAY+HE  G+SGPH+ILVPKSTLSNWLNELKRWCP LRPLRFHGT+  R ++
Sbjct:  289 MGLGKTLQSISVLAYMHEYKGISGPHIILVPKSTLSNWLNELKRWCPALRPLRFHGTREERASL 352          
BLAST of mRNA_H-elongata_contig160960.3901.1 vs. uniprot
Match: A0A7S2AX79_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2AX79_9CHLO)

HSP 1 Score: 106 bits (264), Expect = 1.550e-26
Identity = 44/62 (70.97%), Postives = 55/62 (88.71%), Query Frame = 0
Query:    1 MGLGKTLQSISILAYIHERMGVSGPHVILVPKSTLSNWLNELKRWCPVLRPLRFHGTKASRQ 62
            MGLGKTLQSIS+L Y+HE  G++GPH+I+VPKSTLSNW+NE++RWCPVLRP++FHG    RQ
Sbjct:   33 MGLGKTLQSISLLGYLHEYRGITGPHLIIVPKSTLSNWMNEVRRWCPVLRPIKFHGNGEERQ 94          
BLAST of mRNA_H-elongata_contig160960.3901.1 vs. uniprot
Match: A0A830HXB8_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HXB8_9CHLO)

HSP 1 Score: 106 bits (265), Expect = 2.260e-25
Identity = 44/62 (70.97%), Postives = 55/62 (88.71%), Query Frame = 0
Query:    1 MGLGKTLQSISILAYIHERMGVSGPHVILVPKSTLSNWLNELKRWCPVLRPLRFHGTKASRQ 62
            MGLGKTLQSIS+L Y+HE  G++GPH+I+VPKSTLSNW+NE++RWCPVLRP++FHG    RQ
Sbjct:  235 MGLGKTLQSISLLGYLHEYRGITGPHLIIVPKSTLSNWMNEVRRWCPVLRPIKFHGNAEERQ 296          
BLAST of mRNA_H-elongata_contig160960.3901.1 vs. uniprot
Match: A0A835YGX5_9STRA (Putative chromatin remodelling complex ATPase chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGX5_9STRA)

HSP 1 Score: 105 bits (261), Expect = 7.850e-25
Identity = 45/61 (73.77%), Postives = 53/61 (86.89%), Query Frame = 0
Query:    1 MGLGKTLQSISILAYIHERMGVSGPHVILVPKSTLSNWLNELKRWCPVLRPLRFHGTKASR 61
            MGLGKTLQSISILAY++E  G+ GPH++LVPKSTLSNW+NE  RWCPVLR +RFHGT+  R
Sbjct:  312 MGLGKTLQSISILAYMYEHKGIRGPHIVLVPKSTLSNWMNEFARWCPVLRAIRFHGTREER 372          
BLAST of mRNA_H-elongata_contig160960.3901.1 vs. uniprot
Match: A0A1E7EMI7_9STRA (SNF2_N-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EMI7_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 2.900e-24
Identity = 45/62 (72.58%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    1 MGLGKTLQSISILAYIHERMGVSGPHVILVPKSTLSNWLNELKRWCPVLRPLRFHGTKASRQ 62
            MGLGKTLQSISILAY  E + + GPH+I VPKSTLSNW+NELKRWCP LR +RFHG+K  R+
Sbjct:   28 MGLGKTLQSISILAYHWEYLRIQGPHLICVPKSTLSNWMNELKRWCPSLRAIRFHGSKEDRE 89          
BLAST of mRNA_H-elongata_contig160960.3901.1 vs. uniprot
Match: A0A7R9ZGQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZGQ6_9STRA)

HSP 1 Score: 103 bits (256), Expect = 3.690e-24
Identity = 46/64 (71.88%), Postives = 54/64 (84.38%), Query Frame = 0
Query:    1 MGLGKTLQSISILAYIHERMGVSGPHVILVPKSTLSNWLNELKRWCPVLRPLRFHGTKASRQNI 64
            MGLGKTLQSISILAY +E +G+ GPH+I VPKSTLSNW+NEL RWCP LR +RFHG+K  R+ I
Sbjct:  291 MGLGKTLQSISILAYNYEYLGIQGPHLICVPKSTLSNWMNELNRWCPSLRAIRFHGSKEDREAI 354          
BLAST of mRNA_H-elongata_contig160960.3901.1 vs. uniprot
Match: A0A7S2HGM0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HGM0_9STRA)

HSP 1 Score: 102 bits (253), Expect = 8.720e-24
Identity = 47/61 (77.05%), Postives = 50/61 (81.97%), Query Frame = 0
Query:    1 MGLGKTLQSISILAYIHERMGVSGPHVILVPKSTLSNWLNELKRWCPVLRPLRFHGTKASR 61
            MGLGKTLQSISIL Y  E   V GPH+ILVPKSTLSNW+NE KRWCP+L PLRFHGTK  R
Sbjct:  233 MGLGKTLQSISILGYTAEYTDVRGPHLILVPKSTLSNWMNEFKRWCPMLNPLRFHGTKEER 293          
BLAST of mRNA_H-elongata_contig160960.3901.1 vs. uniprot
Match: A0A7S4NH32_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NH32_9STRA)

HSP 1 Score: 102 bits (253), Expect = 9.460e-24
Identity = 45/64 (70.31%), Postives = 53/64 (82.81%), Query Frame = 0
Query:    1 MGLGKTLQSISILAYIHERMGVSGPHVILVPKSTLSNWLNELKRWCPVLRPLRFHGTKASRQNI 64
            MGLGKTLQSISILAY +E +G+ GPH++ VPKSTLSNW+NEL RWCP LR +RFHG K  R+ I
Sbjct:  295 MGLGKTLQSISILAYNYEYLGIQGPHLVCVPKSTLSNWMNELNRWCPSLRAIRFHGNKDDREAI 358          
BLAST of mRNA_H-elongata_contig160960.3901.1 vs. uniprot
Match: A0A7S1ZYH1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZYH1_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.770e-23
Identity = 47/64 (73.44%), Postives = 52/64 (81.25%), Query Frame = 0
Query:    1 MGLGKTLQSISILAYIHERMGVSGPHVILVPKSTLSNWLNELKRWCPVLRPLRFHGTKASRQNI 64
            MGLGKTLQSISILAY +E + V GPH+ILVPKSTLSNW+ EL RWCP LR +RFHG K  RQ I
Sbjct:  286 MGLGKTLQSISILAYNYEYLRVQGPHLILVPKSTLSNWMIELNRWCPALRAIRFHGNKEERQTI 349          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig160960.3901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LCC1_9PHAE2.110e-3088.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV68_ECTSI6.940e-2979.69Probable chromatin remodelling complex ATPase chai... [more]
A0A7S2AX79_9CHLO1.550e-2670.97Hypothetical protein (Fragment) n=1 Tax=Pycnococcu... [more]
A0A830HXB8_9CHLO2.260e-2570.97Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]
A0A835YGX5_9STRA7.850e-2573.77Putative chromatin remodelling complex ATPase chai... [more]
A0A1E7EMI7_9STRA2.900e-2472.58SNF2_N-domain-containing protein (Fragment) n=1 Ta... [more]
A0A7R9ZGQ6_9STRA3.690e-2471.88Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S2HGM0_9STRA8.720e-2477.05Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S4NH32_9STRA9.460e-2470.31Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]
A0A7S1ZYH1_9STRA1.770e-2373.44Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 1..64
e-value: 2.5E-21
score: 77.7
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 1..50
e-value: 4.9E-10
score: 38.7
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 1..64
NoneNo IPR availablePANTHERPTHR10799:SF979coord: 1..64
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig160960contigH-elongata_contig160960:945..1136 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig160960.3901.1mRNA_H-elongata_contig160960.3901.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig160960 927..1136 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig160960.3901.1 ID=prot_H-elongata_contig160960.3901.1|Name=mRNA_H-elongata_contig160960.3901.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bp
MGLGKTLQSISILAYIHERMGVSGPHVILVPKSTLSNWLNELKRWCPVLR
PLRFHGTKASRQNI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038718SNF2-like_sf
IPR000330SNF2_N
IPR027417P-loop_NTPase