prot_H-elongata_contig160856.3896.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig160856.3896.1
Unique Nameprot_H-elongata_contig160856.3896.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length61
Homology
BLAST of mRNA_H-elongata_contig160856.3896.1 vs. uniprot
Match: D7FH45_ECTSI (ERCC4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH45_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 5.050e-30
Identity = 57/61 (93.44%), Postives = 59/61 (96.72%), Query Frame = 0
Query:    1 WHRVGFKTKQLLQDLKTLRSLLDYVFRYDAITFYQLLLSEKRKAAAVRDPPLWMGTAAADR 61
            WHRVGFKTKQLLQDLKTLRSLLDYVFRYDAITFYQLLL EK KAAAVRDPPLW+GT+AADR
Sbjct:  404 WHRVGFKTKQLLQDLKTLRSLLDYVFRYDAITFYQLLLGEKSKAAAVRDPPLWIGTSAADR 464          
BLAST of mRNA_H-elongata_contig160856.3896.1 vs. uniprot
Match: A0A6H5JEA6_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA6_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 5.060e-30
Identity = 57/61 (93.44%), Postives = 59/61 (96.72%), Query Frame = 0
Query:    1 WHRVGFKTKQLLQDLKTLRSLLDYVFRYDAITFYQLLLSEKRKAAAVRDPPLWMGTAAADR 61
            WHRVGFKTKQLLQDLKTLRSLLDYVFRYDAITFYQLLL EK KAAAVRDPPLW+GT+AADR
Sbjct:  389 WHRVGFKTKQLLQDLKTLRSLLDYVFRYDAITFYQLLLGEKSKAAAVRDPPLWIGTSAADR 449          
BLAST of mRNA_H-elongata_contig160856.3896.1 vs. uniprot
Match: A0A482S402_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S402_9ARCH)

HSP 1 Score: 68.6 bits (166), Expect = 4.630e-12
Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 0
Query:    1 WHRVGFKTKQLLQDLKTLRSLLDYVFRYDAITFYQLLLSEKRKAAAVRDPPLWMGTAAADR 61
            WHR+ F+TKQ++ DL  LR LLDY+ RYDA +FY LL+     +     P LW+ TAAA++
Sbjct:  301 WHRIAFRTKQIVGDLTVLRKLLDYLVRYDAFSFYYLLMKLHAASKEQHSPSLWLTTAAAEQ 361          
BLAST of mRNA_H-elongata_contig160856.3896.1 vs. uniprot
Match: A0A1Z5JRX1_FISSO (DNA excision repair protein ERCC-4 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JRX1_FISSO)

HSP 1 Score: 68.2 bits (165), Expect = 6.800e-12
Identity = 31/60 (51.67%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    1 WHRVGFKTKQLLQDLKTLRSLLDYVFRYDAITFYQLLLSEKRKAAAVRDPPLWMGTAAAD 60
            WHR+  +TKQL+QDL+TLR+L   +  YD ++FY+LLLS +  +AA R P +W+ T AAD
Sbjct:  308 WHRLSPETKQLIQDLRTLRTLFQNLLTYDCVSFYKLLLSIQSMSAASRHPSMWLLTPAAD 367          
BLAST of mRNA_H-elongata_contig160856.3896.1 vs. uniprot
Match: A0A6G0WJQ9_9STRA (ERCC4 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJQ9_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 9.290e-12
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 0
Query:    1 WHRVGFKTKQLLQDLKTLRSLLDYVFRYDAITFYQLLLSEKRKAAAVRDPPLWMGTAAADR 61
            WH++  KTKQL  DL  LR LL Y+ RYDAIT+Y  L+++K+++   R P  W+ T AADR
Sbjct:  264 WHQLPAKTKQLCSDLTVLRHLLAYLTRYDAITYYSFLMTQKKQSGQQRVPSAWLVTEAADR 324          
BLAST of mRNA_H-elongata_contig160856.3896.1 vs. uniprot
Match: A0A7S1ZEI6_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZEI6_TRICV)

HSP 1 Score: 64.7 bits (156), Expect = 2.140e-11
Identity = 28/60 (46.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 WHRVGFKTKQLLQDLKTLRSLLDYVFRYDAITFYQLLLSEKRKAAAVRDPPLWMGTAAAD 60
            WHR+   TKQL+ DL+TLR+L  Y+ +YD + F++L+ S +  +AA R+P +W+ T AAD
Sbjct:   87 WHRLKPATKQLVNDLRTLRTLFQYLVQYDCVGFWRLICSVRTMSAAARNPSMWLLTPAAD 146          
BLAST of mRNA_H-elongata_contig160856.3896.1 vs. uniprot
Match: A0A7S2XSK0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSK0_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 4.440e-11
Identity = 29/60 (48.33%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    1 WHRVGFKTKQLLQDLKTLRSLLDYVFRYDAITFYQLLLSEKRKAAAVRDPPLWMGTAAAD 60
            WHR+  +TKQL+ DL+TLRSL  Y+  YD ++F++L+ S +  +AA R+P +W+ T AAD
Sbjct:  345 WHRLKPQTKQLVNDLRTLRSLFQYLIHYDCVSFWKLINSIRTMSAASRNPSMWLLTPAAD 404          
BLAST of mRNA_H-elongata_contig160856.3896.1 vs. uniprot
Match: A0A6A5AUH5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AUH5_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 5.980e-11
Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 0
Query:    1 WHRVGFKTKQLLQDLKTLRSLLDYVFRYDAITFYQLLLSEKRKAAAVRDPPLWMGTAAADR 61
            WH++  KTKQL  DL  LR LL Y+ RYDAITFY  LL++K+ +   R P  W+ + AADR
Sbjct:  266 WHQLPAKTKQLSADLTHLRQLLSYLTRYDAITFYSYLLTQKKLSGQQRIPSPWLFSEAADR 326          
BLAST of mRNA_H-elongata_contig160856.3896.1 vs. uniprot
Match: A0A8J9X6T6_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X6T6_PHATR)

HSP 1 Score: 65.5 bits (158), Expect = 6.000e-11
Identity = 31/60 (51.67%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    1 WHRVGFKTKQLLQDLKTLRSLLDYVFRYDAITFYQLLLSEKRKAAAVRDPPLWMGTAAAD 60
            WHR+  +TKQL+QDL+TLR+L   + +YD +TF++L+ S K  +AA R P LW+ T AAD
Sbjct:  338 WHRLKPQTKQLVQDLRTLRTLFQSLIQYDCVTFWKLINSIKTMSAASRYPSLWLLTPAAD 397          
BLAST of mRNA_H-elongata_contig160856.3896.1 vs. uniprot
Match: W4GRV4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GRV4_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 6.020e-11
Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 0
Query:    1 WHRVGFKTKQLLQDLKTLRSLLDYVFRYDAITFYQLLLSEKRKAAAVRDPPLWMGTAAADR 61
            WH++  KTKQL  DL  LR LL Y+ RYDAITFY  LL++K+ +   R P  W+ + AADR
Sbjct:  266 WHQLPAKTKQLSADLTHLRQLLSYLTRYDAITFYSYLLTQKKLSGQQRIPSPWLFSEAADR 326          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig160856.3896.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH45_ECTSI5.050e-3093.44ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JEA6_9PHAE5.060e-3093.44ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A482S402_9ARCH4.630e-1249.18Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A1Z5JRX1_FISSO6.800e-1251.67DNA excision repair protein ERCC-4 n=2 Tax=Fistuli... [more]
A0A6G0WJQ9_9STRA9.290e-1250.82ERCC4 domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A7S1ZEI6_TRICV2.140e-1146.67Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S2XSK0_9STRA4.440e-1148.33Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6A5AUH5_9STRA5.980e-1152.46Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A8J9X6T6_PHATR6.000e-1151.67Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
W4GRV4_9STRA6.020e-1152.46Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10150DNA REPAIR ENDONUCLEASE XPFcoord: 1..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig160856contigH-elongata_contig160856:151..1271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig160856.3896.1mRNA_H-elongata_contig160856.3896.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig160856 151..1271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig160856.3896.1 ID=prot_H-elongata_contig160856.3896.1|Name=mRNA_H-elongata_contig160856.3896.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bp
WHRVGFKTKQLLQDLKTLRSLLDYVFRYDAITFYQLLLSEKRKAAAVRDP
PLWMGTAAADR
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