prot_H-elongata_contig16070.3892.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16070.3892.1
Unique Nameprot_H-elongata_contig16070.3892.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length520
Homology
BLAST of mRNA_H-elongata_contig16070.3892.1 vs. uniprot
Match: D7G7T4_ECTSI (Protein binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T4_ECTSI)

HSP 1 Score: 430 bits (1105), Expect = 1.420e-135
Identity = 379/565 (67.08%), Postives = 407/565 (72.04%), Query Frame = 0
Query:    1 MVLPAWMTQGK-VQPVAGALGADKAVSSGAVLQEQ-RAPGGLQDTALSRPTFSQPP--PVVT---SKPPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------RAGLGYTPPPGSAPIQRAASSFSTPQAPQQTPAQPXXXXXXXXXXXXXXXXXXXXXXXXQRAPYGMPLQXXXXXXXXXXXXXXQALMGGMPPMMMPMQQYGRPPMMPTMAPPRLXXXXMFPPTHGWSEHKAPDGRPYFYNSITRVSTYDKPNELKTPQEKVAAVAATTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIEEEKVTYETEEEKKEAFIEMLRECEVTSTTKWPETQKYCQSDPRWELLRKGTRRQIWTEYQHKRRKEETEEKRAKAKKARMGFMKMLAQNTQIDGRSRWDDAERMLRDDPRFRAVPDSSDREDLFNEFVEALTKKEKEDRRAAHKKATDRFVEFLEDDHVSLGITHRTIWRDVRDTIERKAPAETDVLDDPDRRRLFDHLTVKLIKA 520
            MVLPAWMTQ K VQPVAG LG+DKAV++G  +QEQ RAPGGLQD ALSR  FSQ P  P  T   +KPPP       XXXXXXXXXXXXXXXXXXXXXXXX                                      RAGLG+TPPPG+AP QRA SSF             XXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXX          + P   YGRPPM P MAP   XXXX+ P  HGW+EHKAPDGRPY+YNSITRVS+YDKP ELKTPQEK A       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      KV Y TEEEKKEAF+EML+ECEVTSTTKWPETQ+YCQSDPRWELLRKG+RRQ WTEYQ+KRRKEE EEKR+KAKKARMGFMKMLAQNTQIDGRSRWD+AER LRDD RF+AVPDS+DREDLFNEFVEALTKKEKEDRRAA K A++RFVEFLE++++SLGIT RT WRD RD IERKAPAETDVL+D DRRRL D L  KL KA
Sbjct:   18 MVLPAWMTQNKGVQPVAGGLGSDKAVAAGMTVQEQQRAPGGLQDAALSR--FSQAPRAPAATPASTKPPPSVGGARPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRXXXXXXXXGRAGLGFTPPPGAAPAQRATSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPP---YGRPPMAPGMAPXXXXXXXVAPVAHGWTEHKAPDGRPYYYNSITRVSSYDKPVELKTPQEKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNKGGKKGKPAVA---------KVEYNTEEEKKEAFVEMLKECEVTSTTKWPETQRYCQSDPRWELLRKGSRRQTWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERTLRDDARFKAVPDSADREDLFNEFVEALTKKEKEDRRAAQKLASERFVEFLEEEYLSLGITFRTTWRDSRDVIERKAPAETDVLEDNDRRRLLDDLVTKLCKA 568          
BLAST of mRNA_H-elongata_contig16070.3892.1 vs. uniprot
Match: A0A6S9FUY3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FUY3_HETAK)

HSP 1 Score: 149 bits (375), Expect = 3.240e-35
Identity = 94/193 (48.70%), Postives = 125/193 (64.77%), Query Frame = 0
Query:  329 AFIEMLRECEVTSTTKWPETQKYCQSDPRWELLRK-GTRRQIWTEYQHKRRKEETEEKRAKAKKARMGFMKMLAQNTQIDGRSRWDDAERMLRDDPRFRAVPDSSDREDLFNEFVEALTKKEKEDRRAAHKKATDRFVEFLEDDHVSLGITHRTIWRDVRDTIERKAPAET-DVLDDPDRRRLFDHLTVKLIK 519
            AF EML E  V STTKW +  K C+ D RW  L   G RRQ   EYQ KR +EE EEKR +A++AR GF+KMLA+NT+ID  +RW +AE +L  D RF AV D++DREDLF +FV  L KKEKE+++AA K+A     E+L  D    G+TH++ ++D+ D ++ KA +   D LD  D R LF+    +L K
Sbjct:   42 AFKEMLLERGVASTTKWSDAVKACEGDKRWRALGTLGERRQALAEYQTKRLREEKEEKRLRARRARDGFLKMLAENTRIDSTTRWREAEDILGKDARFGAVEDTADREDLFKDFVTELGKKEKEEKKAARKEAKKALEEYLAAD--GTGLTHKSRFKDLYDDLKDKARSRGWDALDKDDMRDLFEDRIKELKK 232          
BLAST of mRNA_H-elongata_contig16070.3892.1 vs. uniprot
Match: A0A835ZHL9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHL9_9STRA)

HSP 1 Score: 145 bits (365), Expect = 4.090e-33
Identity = 86/202 (42.57%), Postives = 126/202 (62.38%), Query Frame = 0
Query:  320 YETEEEKKEAFIEMLRECEVTSTTKWPETQKYCQSDPRWELLRKGTRRQIWTEYQHKRRKEETEEKRAKAKKARMGFMKMLAQNTQIDGRSRWDDAERMLRDDPRFRAVPDSSDREDLFNEFVEALTKKEKEDRRAAHKKATDRFVEFLED-DHVSLGITHRTIWRDVRDTIERKAPAET--DVLDDPDRRRLFDHLTVKLI 518
            Y+T ++KKEAF+ +L + EVTS TKW + +K C  DPRW +L+KG RRQ  TEYQ+ RRKEE +E+RA+AKKA+  F+KMLA N  IDG +RW +A+ +L  D RF+ V D   RE++F EF E L K+++E+     K+A   + E +   +   L ITH T W +V   +   A  +    V+ + ++R +F     KL+
Sbjct:  377 YKTFKQKKEAFMSLLADEEVTSGTKWADIEKACAEDPRWLVLKKGERRQTATEYQNMRRKEEAKEERARAKKAKDAFLKMLATNFSIDGNTRWTEAKDLLASDIRFQNVQDDRIREEIFMEFTEELRKRDREEESKRRKQALAAYAELVAGANQAGLNITHTTKWSEVSMALADMAAPDPLLSVITETEKRGIFQEHVTKLL 578          
BLAST of mRNA_H-elongata_contig16070.3892.1 vs. uniprot
Match: A0A7C8ZF53_OPUST (Uncharacterized protein (Fragment) n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8ZF53_OPUST)

HSP 1 Score: 101 bits (252), Expect = 1.540e-19
Identity = 73/200 (36.50%), Postives = 112/200 (56.00%), Query Frame = 0
Query:  313 IEEEKVTYETEEEKKEAFIEMLRECEVTSTTKWPETQKYCQSDPRWELLRK-GTRRQIWTEYQHKRRKEETEEKRAKAKKARMGFMKMLAQNTQIDGRSRWDDAERMLRDDPRFRAVPDSSDREDLFNEFVEALTKKEKEDRRAAHKKATDRFVEFLEDDHVSLG-ITHRTIWRDVRDTIERKAPAETDVLDDPDRRRLF 510
            IE E V Y  ++E K+AF  +L    V S   W +T +   +D R+  LR  G R+Q + EY ++++K+E EE+RA+ KKAR  F KML + +++   +RW  A ++  DD RF+AV  + DRED+F E++  L KKE E      ++    + +FLE    S G I   + WR V+D +E  A      L+  DR ++F
Sbjct:  113 IEHETVLYANKQEAKDAFKALLESVRVESDWTWEQTMRLIINDKRYAALRSLGERKQAFNEYLNQKKKQEAEERRARNKKAREDFRKMLEECSELTSTTRWGKAVKIFGDDERFKAVERARDREDMFEEYLAELGKKELEKAEEDRQRNIIEYRQFLE----SCGFIKANSQWRKVKDRLE--ADERCSQLETMDRLKIF 306          
BLAST of mRNA_H-elongata_contig16070.3892.1 vs. uniprot
Match: A0A158Q3R6_DRAME (Uncharacterized protein n=1 Tax=Dracunculus medinensis TaxID=318479 RepID=A0A158Q3R6_DRAME)

HSP 1 Score: 101 bits (252), Expect = 6.380e-19
Identity = 114/308 (37.01%), Postives = 169/308 (54.87%), Query Frame = 0
Query:  220 WSEHKAPDGRPYFYNSITRVSTYDKPNELKTPQEKVAAVAATTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK-------------IEEEKVTYETEEEKKEA--FIEMLR----ECEVTSTTKWPETQKYCQSDPRWELLRK-GTRRQIWTEYQHKRRKEETEEKRAKAKKARMGFMKMLAQNTQIDGRSRWDDAERMLRDDPRFRAVPDSSDREDLFNEFVEALTKKEKEDRRAAHKKATDRFVEFLEDDHVSLGITHRTIWRDV-RDTIERKAPAETDVLDDPDR 506
            WSEH A DGR Y+YN IT+ S++ KP+ELKTP+EK AA      XXXXXXXXXXXXXXXXXXXXXXXX                        +             + E++V  E E +KK+A  F E+LR    E ++TST+ W  T KY Q DPR+ +L K   ++Q++  ++ +R+KEE +EKR   KKA+    + L  + ++    R+  AE +  ++P ++AV DS +R+++F + +E + K+EKE+ ++  ++      + LE       IT++T W    R  IE  A A    L   D+
Sbjct:  136 WSEHTASDGRIYYYNKITKQSSWLKPDELKTPEEKKAASLKLXXXXXXXXXXXXXXXXXXXXXXXXXXKDFEPSNKEEKKENTESKIATIPKEEMTTNPKTDIIEAVGEDEVDEEKELKKKQADKFRELLRDKYNEGKITSTSSWDNTVKYIQHDPRFRILNKVSEKKQLFNAWKVQRQKEERDEKRIAIKKAKEELEQWLQNHPKVRATMRYSKAESLFANEPEWKAVHDS-ERKEIFRDAMELIEKREKENAKSIRRRNVQALADILEG---MEEITYKTTWAQAQRLLIENPAFANDSTLQSMDK 439          
BLAST of mRNA_H-elongata_contig16070.3892.1 vs. uniprot
Match: UPI001CF34C9E (pre-mRNA-processing factor 40 homolog B-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF34C9E)

HSP 1 Score: 101 bits (251), Expect = 8.480e-19
Identity = 108/308 (35.06%), Postives = 148/308 (48.05%), Query Frame = 0
Query:  220 WSEHKAPDGRPYFYNSITRVSTYDKPNELKTPQE----------------------------------------KVAAVAATTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIEEEKVTYETEEEKKEAFIEMLRECEVTSTTKWPETQKYCQSDPRWELLRK-GTRRQIWTEYQHKRRKEETEEKRAKAKKARMGFMKMLAQNTQIDGRSRWDDAERMLRDDPRFRAVPDSSDREDLFNEFVEALTKKEKE---DRRAAHKKATDRFVEFLEDDHVSLGITHRTIW 483
            W+EHKAPDGR YFYN+ T+VST+ KPNELKTP E                                        ++        XXXXXXXXXXXXXXXXXX                               +E+++  YET+EE K+AF ++LRE EV S + W    +   SDPR+  L+K   ++Q + EY+ KR  EE EE+R KAKKAR      L  + ++    RW  A  M   +P + AV +  DR+D+F++ V  L KKE     ++RA ++K        L+  +    IT+RT W
Sbjct:  177 WTEHKAPDGRTYFYNTETKVSTWQKPNELKTPGEIQLDSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAELKELIKQEQEKEXXXXXXXXXXXXXXXXXXESDGKKADEAAKQDYPMASAVNVTEVPAVVAVEKKEYIYETKEEAKQAFKDLLREKEVPSNSSWDNAMRIIVSDPRYGALKKMNEKKQAFNEYKTKRANEEKEEQRQKAKKAREDLRSFLENHKKMHSSVRWRRAGEMFEGEPEWEAVHER-DRKDVFDDVVFFLAKKEXXXXXEQRAHNRKL------MLQVYNTMSSITYRTTW 477          
BLAST of mRNA_H-elongata_contig16070.3892.1 vs. uniprot
Match: W7TPS7_9STRA (Pre-mrna-processing factor 40 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPS7_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.510e-18
Identity = 61/141 (43.26%), Postives = 87/141 (61.70%), Query Frame = 0
Query:  319 TYETEEEKKEAFIEMLRECEVTSTTKWPETQKYCQSDPRWELLRKGTRRQIWTEYQHKRRKEETEEKRAKAKKARMGFMKMLAQNTQIDGRSRWDDAERMLRDDPRFRAVPDS-SDREDLFNEFVEALTKKEKEDRRAAHK 458
            ++ T EE   AF +ML +  V+ST KW +  K     P W  L+ G ++Q + EYQ KR KEE          AR GF+KMLA+  QID +SRW +AE +L++DPRF++   +  D+ED+F++FV  L KKEKE++R   K
Sbjct:  281 SFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALKTGEKKQAFAEYQTKRMKEEXXXXXXXXXXARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRLNQK 421          
BLAST of mRNA_H-elongata_contig16070.3892.1 vs. uniprot
Match: A0A200PSI5_9MAGN (WW domain n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200PSI5_9MAGN)

HSP 1 Score: 99.4 bits (246), Expect = 3.950e-18
Identity = 66/180 (36.67%), Postives = 99/180 (55.00%), Query Frame = 0
Query:  313 IEEEKVTYETEEEKKEAFIEMLRECEVTSTTKWPETQKYCQSDPRWELLRK-GTRRQIWTEYQHKRRKEETEEKRAKAKKARMGFMKMLAQNTQIDGRSRWDDAERMLRDDPRFRAVPDSSDREDLFNEFVEALTKKEKEDRRAAHKKATDRFVEFLEDDHVSLGITHRTIWRDVRDTIE 491
            ++EE + Y  ++E K AF  +L    V S   W +  +   +D R+  L+  G R+Q + EY  +R+K+E EE+R K KKAR  F KML ++ ++   +RW  A  M  DD RF+AV  + DREDLF  ++  L KKEK   +  HK+    + +FLE       I   + WR V+D +E
Sbjct:  462 VDEETLIYANKQEAKNAFKALLESANVESDWNWDQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRIKQKKAREEFAKMLEESKELTSSTRWSKAVTMFEDDERFKAVERARDREDLFENYLVELQKKEKAKAQEEHKRNIMEYRQFLESCDF---IKPNSQWRKVQDRLE 638          
BLAST of mRNA_H-elongata_contig16070.3892.1 vs. uniprot
Match: A0A674PLR8_TAKRU (Uncharacterized protein n=1 Tax=Takifugu rubripes TaxID=31033 RepID=A0A674PLR8_TAKRU)

HSP 1 Score: 97.4 bits (241), Expect = 1.170e-17
Identity = 109/297 (36.70%), Postives = 169/297 (56.90%), Query Frame = 0
Query:  197 PPMMPTMA-PPRLXXXXMFP--PTHGWSEHKAPDGRPYFYNSITRVSTYDKPNELKTPQEKVAAVAATTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIEEEKVTYE--TEEEKKEAFIEMLRECEVTSTTKWPETQKYCQSDPRWELLRK-GTRRQIWTEYQHKRRKEETEEKRAKAKKARMGFMKMLAQNTQIDGRSRWDDAERMLRDDPRFRAVPDSSDREDLFNEFVEALTKKEKEDRRAAHKKATDRFVEFLEDDHVSLGITHRTIWRDVR 487
            PPMMP M  PPR+    + P  P   W+EHK+ DG+ Y+YN+ T+ ST++KP++LK+P E++ +      XXXXXXXXXXXXXXXXXXXXXXXXXX                      + E +K TY+  T+EE K+AF E+L+E  V+S + W +  K   +DPR+  L K   ++Q +  Y+ +  KEE EE R K K+++  F + L  + ++   +R+  AE+M  +   +  VP+  DR +++ + +  L KKEKE  +   K+  +     L++      +T+RT W + +
Sbjct:   65 PPMMPAMMLPPRISAASVQPTGPKSVWTEHKSMDGKTYYYNTETKQSTWEKPDDLKSPAEQMLS-KCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEDLEGKEMLSDYNDEITPKEERPELQKKTYKWNTKEEAKQAFKELLKEKGVSSNSSWEQAMKLIINDPRYSALPKLSEKKQAFNAYKVQTEKEEKEEARIKYKESKETFQRFLENHEKMTSTTRYKKAEQMFAEVEVWSCVPER-DRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDN---MANVTYRTTWSEAQ 356          
BLAST of mRNA_H-elongata_contig16070.3892.1 vs. uniprot
Match: A0A2G9GF27_9LAMI (Spliceosomal protein FBP11/Splicing factor PRP40 n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GF27_9LAMI)

HSP 1 Score: 97.1 bits (240), Expect = 1.380e-17
Identity = 67/181 (37.02%), Postives = 100/181 (55.25%), Query Frame = 0
Query:  312 KIEEEKVTYETEEEKKEAFIEMLRECEVTSTTKWPETQKYCQSDPRWELLRK-GTRRQIWTEYQHKRRKEETEEKRAKAKKARMGFMKMLAQNTQIDGRSRWDDAERMLRDDPRFRAVPDSSDREDLFNEFVEALTKKEKEDRRAAHKKATDRFVEFLEDDHVSLGITHRTIWRDVRDTIE 491
            K+E+  + YE++EE K+AF  +L    V S   W +  +   +D R+  LR  G R+Q + EY  K++K+E EEKRA+ KKAR  F KML ++  +   +RW  A  M   D RF AV  + DREDLF++ +E L KKE+       K+    ++EFL+       I   + WR V+  +E
Sbjct:  197 KVEQGPLVYESKEEAKKAFKALLESANVGSDWNWDQAMRVIINDRRYGALRTLGERKQTFNEYVAKKKKQEAEEKRARQKKAREDFKKMLQESKDLTSSARWSKAITMFEKDERFHAVERAKDREDLFDDHLEELKKKERAKALEDRKRHKAEYLEFLKSCDF---IKANSQWRKVQHRLE 374          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16070.3892.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7T4_ECTSI1.420e-13567.08Protein binding protein, putative n=2 Tax=Ectocarp... [more]
A0A6S9FUY3_HETAK3.240e-3548.70Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A835ZHL9_9STRA4.090e-3342.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7C8ZF53_OPUST1.540e-1936.50Uncharacterized protein (Fragment) n=2 Tax=Opuntia... [more]
A0A158Q3R6_DRAME6.380e-1937.01Uncharacterized protein n=1 Tax=Dracunculus medine... [more]
UPI001CF34C9E8.480e-1935.06pre-mRNA-processing factor 40 homolog B-like n=1 T... [more]
W7TPS7_9STRA1.510e-1843.26Pre-mrna-processing factor 40 n=3 Tax=Monodopsidac... [more]
A0A200PSI5_9MAGN3.950e-1836.67WW domain n=1 Tax=Macleaya cordata TaxID=56857 Rep... [more]
A0A674PLR8_TAKRU1.170e-1736.70Uncharacterized protein n=1 Tax=Takifugu rubripes ... [more]
A0A2G9GF27_9LAMI1.380e-1737.02Spliceosomal protein FBP11/Splicing factor PRP40 n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002713FF domainSMARTSM00441FF_2coord: 457..516
e-value: 0.34
score: 20.0
coord: 323..376
e-value: 4.4E-9
score: 46.2
coord: 389..444
e-value: 8.5E-10
score: 48.5
IPR002713FF domainPFAMPF01846FFcoord: 325..373
e-value: 7.9E-12
score: 45.2
coord: 391..441
e-value: 5.7E-15
score: 55.2
IPR002713FF domainPROSITEPS51676FFcoord: 320..376
score: 10.632
IPR002713FF domainPROSITEPS51676FFcoord: 388..444
score: 9.974
IPR001202WW domainSMARTSM00456ww_5coord: 215..247
e-value: 1.4E-8
score: 44.5
IPR001202WW domainPFAMPF00397WWcoord: 219..245
e-value: 5.8E-9
score: 35.9
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 220..245
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 214..247
score: 11.822
NoneNo IPR availableGENE3D2.20.70.10coord: 206..267
e-value: 3.9E-14
score: 53.9
NoneNo IPR availablePANTHERPTHR11864:SF0PRP40 PRE-MRNA PROCESSING FACTOR 40 HOMOLOG A (YEAST)coord: 76..502
IPR036517FF domain superfamilyGENE3D1.10.10.440coord: 311..378
e-value: 3.3E-16
score: 60.9
IPR036517FF domain superfamilyGENE3D1.10.10.440coord: 379..450
e-value: 3.3E-21
score: 77.3
coord: 451..520
e-value: 5.7E-7
score: 31.7
IPR036517FF domain superfamilySUPERFAMILY81698FF domaincoord: 449..519
IPR036517FF domain superfamilySUPERFAMILY81698FF domaincoord: 383..451
IPR036517FF domain superfamilySUPERFAMILY81698FF domaincoord: 319..383
IPR039726Pre-mRNA-processing factor Prp40PANTHERPTHR11864PRE-MRNA-PROCESSING PROTEIN PRP40coord: 76..502
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 208..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16070contigH-elongata_contig16070:652..4712 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16070.3892.1mRNA_H-elongata_contig16070.3892.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16070 652..4742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16070.3892.1 ID=prot_H-elongata_contig16070.3892.1|Name=mRNA_H-elongata_contig16070.3892.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=520bp
MVLPAWMTQGKVQPVAGALGADKAVSSGAVLQEQRAPGGLQDTALSRPTF
SQPPPVVTSKPPPGPPPGGPPVASPPVGPPEGAPPGAPPNRPPGRAGLGY
TPPPGSAPIQRAASSFSTPQAPQQTPAQPPQQQPPPHHHQQQQHHHVHHH
VPPQRAPYGMPLQQHPPQQHHMYHHGQQALMGGMPPMMMPMQQYGRPPMM
PTMAPPRLAPPPMFPPTHGWSEHKAPDGRPYFYNSITRVSTYDKPNELKT
PQEKVAAVAATTTAATPKATPIKPPTPEATVGGSTSPADSNGGGAGGNGV
GGSAGKAKGKKKIEEEKVTYETEEEKKEAFIEMLRECEVTSTTKWPETQK
YCQSDPRWELLRKGTRRQIWTEYQHKRRKEETEEKRAKAKKARMGFMKML
AQNTQIDGRSRWDDAERMLRDDPRFRAVPDSSDREDLFNEFVEALTKKEK
EDRRAAHKKATDRFVEFLEDDHVSLGITHRTIWRDVRDTIERKAPAETDV
LDDPDRRRLFDHLTVKLIKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002713FF_domain
IPR001202WW_dom
IPR036517FF_domain_sf
IPR039726Prp40-like
IPR036020WW_dom_sf