prot_H-elongata_contig160500.3878.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig160500.3878.1
Unique Name	prot_H-elongata_contig160500.3878.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	153

Homology

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BLAST of mRNA_H-elongata_contig160500.3878.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.310e-27
Identity = 73/164 (44.51%), Postives = 98/164 (59.76%), Query Frame = 0

Query:    1 MAVDGKHVVGR-ALDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSG-ECGEKNCGKKGQGGVGLAIRT----SITRDARPPEFISDRLLKVILELQGRAKAITFLVAYAPTETHNASN------KHAFWTSLDRAVEKVPRHEQLFVLMDANARTGMR 152
            +A  G++ +G   + V+ I    GCDVIGLQETRR+G  +    GY +  SG   G K+  K+G  GVG+AI+     S+  + R  E IS RL+KV L++ GR   +TFLV YAPTET   +       K +FWT+LD A+ +V   + L VLMDANARTG R
Sbjct:  185 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKD--KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRR 345

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BLAST of mRNA_H-elongata_contig160500.3878.1 vs. uniprot
Match: A0A6H5L660_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L660_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 1.590e-27
Identity = 72/164 (43.90%), Postives = 96/164 (58.54%), Query Frame = 0

Query:    1 MAVDGKHVVGR-ALDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSG-ECGEKNCGKKGQGGVGLAIRT----SITRDARPPEFISDRLLKVILELQGRAKAITFLVAYAPTET------HNASNKHAFWTSLDRAVEKVPRHEQLFVLMDANARTGMR 152
            +A  G++ +G   + V+ I    GCDVIGLQETRR G  +    GY +  SG   G K+  K+G  GVG+AI+     S+  + R  E I  RL+KV L + GR   ITF+V YAPTET       + + K +FWT+LD  + +V  H+ L VLMDANARTG R
Sbjct:  158 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD--KRGVHGVGIAIKETMWESVGEEGRKVECIGPRLMKVRLRI-GRTCGITFVVRYAPTETVRTTAGGDINAKDSFWTALDAVIREVHSHDHLVVLMDANARTGRR 318

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BLAST of mRNA_H-elongata_contig160500.3878.1 vs. uniprot
Match: A0A6H5KZE6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE6_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 2.400e-27
Identity = 71/164 (43.29%), Postives = 97/164 (59.15%), Query Frame = 0

Query:    1 MAVDGKHVVGR-ALDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSG-ECGEKNCGKKGQGGVGLAIRT----SITRDARPPEFISDRLLKVILELQGRAKAITFLVAYAPTET------HNASNKHAFWTSLDRAVEKVPRHEQLFVLMDANARTGMR 152
            +A  G++ +G   + V+ I    GCDVIGLQETRR G  +    GY +  SG   G K+  K+G  GVG+AI+     S+  + R  E IS RL+KV L++ GR   +TF+V YAPTET       + + K +FWT+LD A+ +V   + L VLM ANARTG R
Sbjct:   19 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD--KRGGHGVGIAIKEAIWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRSTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMGANARTGRR 179

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BLAST of mRNA_H-elongata_contig160500.3878.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 3.760e-27
Identity = 72/164 (43.90%), Postives = 99/164 (60.37%), Query Frame = 0

Query:    1 MAVDGKHVVGR-ALDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSG-ECGEKNCGKKGQGGVGLAIRT----SITRDARPPEFISDRLLKVILELQGRAKAITFLVAYAPTET------HNASNKHAFWTSLDRAVEKVPRHEQLFVLMDANARTGMR 152
            +A  G++ +G   + V+ I    GCDVIGLQETRR+G  +    GY +  SG   G K+  K+G  GVG+AI+     S+  + R  E IS RL+KV L++ GR   +TF+V YAPTET       + + K +FWT+LD A+ +V   + L VLMDANARTG R
Sbjct:   96 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKD--KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRR 256

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BLAST of mRNA_H-elongata_contig160500.3878.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 8.060e-27
Identity = 72/164 (43.90%), Postives = 98/164 (59.76%), Query Frame = 0

Query:    1 MAVDGKHVVGR-ALDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSG-ECGEKNCGKKGQGGVGLAIRT----SITRDARPPEFISDRLLKVILELQGRAKAITFLVAYAPTET------HNASNKHAFWTSLDRAVEKVPRHEQLFVLMDANARTGMR 152
            +A  G++ +G   + V+ I    GCDVIGLQETRR G  +    GY +  SG   G K+  K+G  GVG+AI+     S+  + R  E IS RL+KV L++ GR   +TF+V YAPTET       + + K +FWT+LD A+ +V   + L VLMDANARTG R
Sbjct:  667 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD--KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRR 827

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BLAST of mRNA_H-elongata_contig160500.3878.1 vs. uniprot
Match: A0A6H5JVN7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN7_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 1.470e-26
Identity = 70/164 (42.68%), Postives = 98/164 (59.76%), Query Frame = 0

Query:    1 MAVDGKHVVGR-ALDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSG-ECGEKNCGKKGQGGVGLAIRTS----ITRDARPPEFISDRLLKVILELQGRAKAITFLVAYAPTET------HNASNKHAFWTSLDRAVEKVPRHEQLFVLMDANARTGMR 152
            +   G++ +G   + V+ I    GCDVIGLQETRR G  +    GY +  SG   G K+  K+G+ GVG+AI+ +    +  + R  E IS RL+KV L++ GR   +TF+V YAPTET       + + K +FWT+LD A+ +V   + L VLMDANARTG R
Sbjct:  165 LVYSGRNPIGHNVMKVMQISSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD--KRGEQGVGIAIKEAMWETVGEEGRKVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRITAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRR 325

[Close]

BLAST of mRNA_H-elongata_contig160500.3878.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 1.900e-26
Identity = 69/151 (45.70%), Postives = 91/151 (60.26%), Query Frame = 0

Query:   13 LDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSG-ECGEKNCGKKGQGGVGLAIRT----SITRDARPPEFISDRLLKVILELQGRAKAITFLVAYAPTET------HNASNKHAFWTSLDRAVEKVPRHEQLFVLMDANARTGMR 152
            + V+ I    GCDVIGLQETRR G  +    GY +  SG   G K+  K+G  GVG+AI+     S+  + R  E IS RL+KV L++ GR   +TF+V YAPTET       + + K +FWT+LD A+ +V   + L VLMDANARTG R
Sbjct:    1 MTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD--KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRR 148

[Close]

BLAST of mRNA_H-elongata_contig160500.3878.1 vs. uniprot
Match: A0A6H5JBD7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD7_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 3.700e-26
Identity = 65/153 (42.48%), Postives = 92/153 (60.13%), Query Frame = 0

Query:    1 MAVDGKHVVGRALDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSGECGEKNCGKKGQGGVGLAIRTSITRDAR-PPEFISDRLLKVILELQGRAKAITFLVAYAPTETHNASNKHAFWTSLDRAVEKVPRHEQLFVLMDANARTGMR 152
            +AV G +  GRA  VL+   R    V+G+QETRR+G + F  AG+ V+C   CG +  G  G   VG+A++ S+ + +    EFI +RL+ + L L G   A+ F+ A APTE   AS+K  FW  LD  V ++P  E ++VL+DANARTG R
Sbjct:   68 LAVIGVNGYGRAYSVLHEAARQDVSVVGMQETRRAGRTEFAAAGFRVFC---CGTETGGVHG---VGIAVKESLCKTSTFTTEFIDERLMAMRLLLAGHRGAVNFVAASAPTEPSTASSKRVFWGKLDSLVRRIPSKECVYVLLDANARTGDR 214

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BLAST of mRNA_H-elongata_contig160500.3878.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.500e-25
Identity = 69/164 (42.07%), Postives = 96/164 (58.54%), Query Frame = 0

Query:    1 MAVDGKHVVGR-ALDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSG-ECGEKNCGKKGQGGVGLAIRT----SITRDARPPEFISDRLLKVILELQGRAKAITFLVAYAPTET------HNASNKHAFWTSLDRAVEKVPRHEQLFVLMDANARTGMR 152
            +A  G++ +G   + V+ I    GCDVIGLQETRR+G  +    GY +  SG   G K+  K+G  GVG+ I+     S+  + R  E I  RL+KV L++ GR   + F+V YAPTET       + + K +FWT+LD A+ +V   + L VLMDANARTG R
Sbjct:   91 LACSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKD--KRGVHGVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQI-GRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRR 251

[Close]

BLAST of mRNA_H-elongata_contig160500.3878.1 vs. uniprot
Match: A0A6H5L7A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A7_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 1.750e-25
Identity = 69/151 (45.70%), Postives = 91/151 (60.26%), Query Frame = 0

Query:   13 LDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSG-ECGEKNCGKKGQGGVGLAIRT----SITRDARPPEFISDRLLKVILELQGRAKAITFLVAYAPTET------HNASNKHAFWTSLDRAVEKVPRHEQLFVLMDANARTGMR 152
            + V+ I    GCDVIGLQETRR G  +    GY +  SG   G K+  K+G  GVG+AI+     S+  + R  E IS RL+KV L++ GR   +TF+V YAPTET       + + K +FWT+LD A+ +V   + L VLMDANARTG R
Sbjct:    1 MTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD--KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRR 148

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig160500.3878.1 vs. uniprot

BLAST of mRNA_H-elongata_contig160500.3878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K3Q1_9PHAE	1.310e-27	44.51	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5L660_9PHAE	1.590e-27	43.90	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KZE6_9PHAE	2.400e-27	43.29	Endo/exonuclease/phosphatase domain-containing pro...	[more]
A0A6H5JMB4_9PHAE	3.760e-27	43.90	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K1H7_9PHAE	8.060e-27	43.90	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JVN7_9PHAE	1.470e-26	42.68	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KBZ6_9PHAE	1.900e-26	45.70	Endo/exonuclease/phosphatase domain-containing pro...	[more]
A0A6H5JBD7_9PHAE	3.700e-26	42.48	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KV75_9PHAE	1.500e-25	42.07	Endo/exonuclease/phosphatase domain-containing pro...	[more]
A0A6H5L7A7_9PHAE	1.750e-25	45.70	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10		coord: 6..153 e-value: 7.1E-14 score: 53.8
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 15..153

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig160500	contig	H-elongata_contig160500:651..1109 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig160500.3878.1	mRNA_H-elongata_contig160500.3878.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig160500 651..1109 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig160500.3878.1 ID=prot_H-elongata_contig160500.3878.1|Name=mRNA_H-elongata_contig160500.3878.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=153bp
MAVDGKHVVGRALDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCS
GECGEKNCGKKGQGGVGLAIRTSITRDARPPEFISDRLLKVILELQGRAK
AITFLVAYAPTETHNASNKHAFWTSLDRAVEKVPRHEQLFVLMDANARTG
MRE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036691	Endo/exonu/phosph_ase_sf