prot_H-elongata_contig16013.3863.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16013.3863.1
Unique Nameprot_H-elongata_contig16013.3863.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length135
Homology
BLAST of mRNA_H-elongata_contig16013.3863.1 vs. uniprot
Match: D7FS53_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS53_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 9.060e-60
Identity = 90/135 (66.67%), Postives = 111/135 (82.22%), Query Frame = 0
Query:    1 QLASLVTTLNSCKEFGFDMEAHNARTYHGLTCLLQISTKSKDFIVDPLVEGMWESMTQLRGPFANPDILKIGHSIRSCDIPSLFRDFGIVVVNAFDTEEAVHALGEKHSGLARVLKNAGIEELHDIAGLKHIMQV 135
            +L++L   LN+C+E+ FD+EAHNARTY+GL CLLQIST+ KD++VDPL EGMW++M  LR  F NPD+LKIGHSIRS D+PSLFRDFG V+VNA DTEEAVHALG K S L +VL +AG+ E HDIAG+K  M+V
Sbjct:   72 KLSALAEDLNACREWSFDVEAHNARTYYGLACLLQISTEWKDYVVDPLAEGMWDNMGLLRDAFGNPDVLKIGHSIRSLDVPSLFRDFGFVIVNAVDTEEAVHALGGKQSALGKVLIDAGVREPHDIAGMKQDMKV 206          
BLAST of mRNA_H-elongata_contig16013.3863.1 vs. uniprot
Match: A0A6H5JK06_9PHAE (R3H domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK06_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 1.740e-57
Identity = 91/134 (67.91%), Postives = 111/134 (82.84%), Query Frame = 0
Query:    1 QLASLVTTLNSCKEFGFDMEAHNARTYHGLTCLLQISTKSKDFIVDPLVEGMWESMTQLRGPFANPDILKIGHSIRSCDIPSLFRDFGIVVVNAFDTEEAVHALGEKHSGLARVLKNAGIEELHDIAGLKHIMQ 134
            +L++L   LN+C+E+ FD+EAHNARTYHGL CLLQIST+ KD++VDPL EGMW++M  LR  F NPD+LKIGHSIRS D+PSLFRDFG V+VNA DTEEAVHALGEK S L +VL NAG+ E HD+AG+K  M+
Sbjct:  338 KLSALAEDLNACREWSFDVEAHNARTYHGLVCLLQISTEWKDYVVDPLAEGMWDNMGLLRDAFGNPDVLKIGHSIRSLDVPSLFRDFGFVIVNAVDTEEAVHALGEKQSALEKVLINAGVREPHDMAGMKQDMK 471          
BLAST of mRNA_H-elongata_contig16013.3863.1 vs. uniprot
Match: A0A835ZCF0_9STRA (Ribonuclease H-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCF0_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.740e-33
Identity = 57/91 (62.64%), Postives = 73/91 (80.22%), Query Frame = 0
Query:    2 LASLVTTLNSCKEFGFDMEAHNARTYHGLTCLLQISTKSK-DFIVDPLVEGMWESMTQLRGPFANPDILKIGHSIRSCDIPSLFRDFGIVV 91
            +A+L   L   +EF FD+E+H+ R+YHGLTCLLQ+ST +  DFIVDPL  GMWE+MTQLR  FA+PD+LK+GH+I  CD+PSL RDFGIV+
Sbjct:  143 VAALAAELTRAREFAFDVESHSYRSYHGLTCLLQVSTDAGGDFIVDPLAPGMWEAMTQLRAVFADPDVLKVGHAISGCDVPSLHRDFGIVM 233          
BLAST of mRNA_H-elongata_contig16013.3863.1 vs. uniprot
Match: A0A7S4RSV8_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RSV8_9STRA)

HSP 1 Score: 117 bits (294), Expect = 4.050e-28
Identity = 58/118 (49.15%), Postives = 78/118 (66.10%), Query Frame = 0
Query:   14 EFGFDMEAHNARTYHGLTCLLQIST-KSKDFIVDPLVEGMWESMTQLRGPFANPDILKIGHSIRSCDIPSLFRDFGIVVVNAFDTEEAVHALGEKHSGLARVLKNAGIEELHDIAGLK 130
            E  FD+E HN   Y  +TCLLQ+ T + KD+++D L  G+W++++ L   FA+P+I+KIGH I   D+PSL RDFGI VVNAFDT EA  AL  K SGLA + +  G+    + A LK
Sbjct:  173 ELAFDLEMHNVSKYMQITCLLQLCTDQGKDYVIDVLAPGVWDAVSLLSPIFADPNIVKIGHCIGGMDVPSLHRDFGIFVVNAFDTYEAARALNYKRSGLATICEQYGLTSSQEYATLK 290          
BLAST of mRNA_H-elongata_contig16013.3863.1 vs. uniprot
Match: A0A7S4JXJ1_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JXJ1_9STRA)

HSP 1 Score: 117 bits (294), Expect = 4.080e-28
Identity = 57/118 (48.31%), Postives = 78/118 (66.10%), Query Frame = 0
Query:   14 EFGFDMEAHNARTYHGLTCLLQISTKS-KDFIVDPLVEGMWESMTQLRGPFANPDILKIGHSIRSCDIPSLFRDFGIVVVNAFDTEEAVHALGEKHSGLARVLKNAGIEELHDIAGLK 130
            E  FDME +N   Y+  TCL+Q+ST + KD+++D L  G+WE +T L   FANP I+K+GH+I   D+P+L RDFG+ VVNAFDT EA   L  KH+ LA V ++ G+    + A LK
Sbjct:  162 EIAFDMEMYNQSMYNQFTCLIQLSTDAGKDYVIDVLAPGVWEKVTLLAPLFANPSIVKVGHAIGGMDVPALHRDFGVFVVNAFDTYEAARVLRLKHTSLASVCEHYGLRSSSEYATLK 279          
BLAST of mRNA_H-elongata_contig16013.3863.1 vs. uniprot
Match: A0A7S2H9Z6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H9Z6_9STRA)

HSP 1 Score: 112 bits (281), Expect = 2.600e-26
Identity = 57/118 (48.31%), Postives = 77/118 (65.25%), Query Frame = 0
Query:   14 EFGFDMEAHNARTYHGLTCLLQIST-KSKDFIVDPLVEGMWESMTQLRGPFANPDILKIGHSIRSCDIPSLFRDFGIVVVNAFDTEEAVHALGEKHSGLARVLKNAGIEELHDIAGLK 130
            E GFD+E HN   Y  +TCLLQ+ T + KD+++D L  G+W++++ L   FA+P+I+KIGH I   D+ SL RDFGI VVNAFDT EA   L  K SGLA +  + G+    + A LK
Sbjct:  289 EIGFDLEMHNQSKYMQVTCLLQLCTDEGKDYVIDVLAPGVWDAVSLLAPIFADPNIVKIGHCIGGMDVSSLHRDFGIFVVNAFDTYEAARVLNLKRSGLATLCDHYGLRSSEEYALLK 406          
BLAST of mRNA_H-elongata_contig16013.3863.1 vs. uniprot
Match: A0A7S1ZMT7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZMT7_TRICV)

HSP 1 Score: 104 bits (259), Expect = 3.170e-26
Identity = 51/115 (44.35%), Postives = 73/115 (63.48%), Query Frame = 0
Query:    6 VTTLNSCKEFGFDMEAHNARTYHGLTCLLQISTK-SKDFIVDPLVEGMWESMTQLRGPFANPDILKIGHSIRSCDIPSLFRDFGIVVVNAFDTEEAVHALGEKHSGLARVLKNAG 119
            V  +    E  FD+E HN   +  +TCLLQ+ST    D++VD L  G+W++++ L   FA+P ++K+GHSI   D+PSL RDFGI VVNAFDT EA   L  K +G+ +  ++ G
Sbjct:   11 VAEMTEASEVAFDLEMHNESLHTQITCLLQLSTDLGTDYVVDVLSPGVWDAVSLLAPVFADPKVVKVGHSIGGMDVPSLHRDFGIFVVNAFDTYEAARCLHLKSAGVGKGCEHYG 125          
BLAST of mRNA_H-elongata_contig16013.3863.1 vs. uniprot
Match: A0A7S3XKC3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKC3_HETAK)

HSP 1 Score: 108 bits (271), Expect = 9.600e-26
Identity = 53/120 (44.17%), Postives = 73/120 (60.83%), Query Frame = 0
Query:    2 LASLVTTLNSCKEFGFDMEAHNARTYHGLTCLLQISTKSKDFIVDPLVEGMWESMTQLRGP-FANPDILKIGHSIRSCDIPSLFRDFGIVVVNAFDTEEAVHALGEKHSGLARVLKNAGI 120
            L  L   L++   FGFD+E HN R+YHGLTCLLQ++T    ++VDPL  G+WE +    GP FA+P   K+ H  R  D P+L RDFG+ + + FDT EA   +G +  GL  +L   G+
Sbjct:   18 LDELAAHLDTVDVFGFDLEFHNYRSYHGLTCLLQVATARGVWVVDPLAPGVWERVGPALGPAFADPQKAKVAHDARGGDAPALLRDFGVRLCHLFDTHEAARQVGHQRLGLTALLLEYGL 137          
BLAST of mRNA_H-elongata_contig16013.3863.1 vs. uniprot
Match: A0A6U2S7D2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2S7D2_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.130e-25
Identity = 54/131 (41.22%), Postives = 80/131 (61.07%), Query Frame = 0
Query:    1 QLASLVTTLNSCKEFGFDMEAHNARTYHGLTCLLQISTKSKDFIVDPLVEGMWESMTQ-LRGPFANPDILKIGHSIRSCDIPSLFRDFGIVVVNAFDTEEAVHALGEKHSGLARVLKNAGIEELHDIAGLK 130
            +L      ++  KEF FD+E HN   Y+G+ CLLQ++T  KD+++D    G+W S+ + LR  F +  ++K+GH+I   D+P+L RDFGI VVNAFDT EA   L  +  GLA + +   +E   + A LK
Sbjct:  248 KLEKCAQEISGAKEFAFDLEMHNPSPYYGMVCLLQLATIEKDYVIDVFAPGVWGSVGRCLRKSFEDSSVVKVGHAIGGMDVPALHRDFGIFVVNAFDTYEAARTLRMEKVGLAALCEYYKLESSEEYAKLK 378          
BLAST of mRNA_H-elongata_contig16013.3863.1 vs. uniprot
Match: A0A7S2W175_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W175_9STRA)

HSP 1 Score: 108 bits (270), Expect = 7.980e-25
Identity = 61/151 (40.40%), Postives = 84/151 (55.63%), Query Frame = 0
Query:    2 LASLVTTLNSCKEFGFDMEAHNARTYHGLTCLLQISTKS---------------------KDFIVDPLVEGMWESMT-QLRGPFANPDILKIGHSIRSCDIPSLFRDFGIVVVNAFDTEEAVHALGEKHSGLARVLKNAGIEELHDIAGLK 130
            L  +V  L  C+ F FD+EA++ R++HG+TCLLQ ST                       ++F+VD  V  +W  ++  LR  F +  I K+ HS+  CDIP+LFRDFG+VVVN FDT EA   LG+KH  LA +L   G  +   +A LK
Sbjct:  209 LEDMVQHLCGCEAFAFDVEANSLRSFHGVTCLLQFSTHGSRPKAPPGAASPPVPTEAFTPRNFVVD--VFALWNELSGALRPLFRDASITKVAHSVTGCDIPALFRDFGVVVVNLFDTYEAARTLGDKHMALASLLMAHGAPKTERMAELK 357          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16013.3863.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS53_ECTSI9.060e-6066.673'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JK06_9PHAE1.740e-5767.91R3H domain-containing protein (Fragment) n=1 Tax=E... [more]
A0A835ZCF0_9STRA1.740e-3362.64Ribonuclease H-like domain-containing protein n=1 ... [more]
A0A7S4RSV8_9STRA4.050e-2849.15Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S4JXJ1_9STRA4.080e-2848.31Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S2H9Z6_9STRA2.600e-2648.31Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1ZMT7_TRICV3.170e-2644.35Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S3XKC3_HETAK9.600e-2644.17Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6U2S7D2_9STRA1.130e-2541.22Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2W175_9STRA7.980e-2540.40Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.420.500coord: 1..121
e-value: 2.1E-38
score: 134.1
NoneNo IPR availablePANTHERPTHR12124:SF47EXOSOME COMPONENT 10coord: 1..116
NoneNo IPR availablePANTHERPTHR12124POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATEDcoord: 1..116
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 1..112
e-value: 1.7E-16
score: 60.5
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16013contigH-elongata_contig16013:368..2556 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16013.3863.1mRNA_H-elongata_contig16013.3863.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16013 368..2556 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16013.3863.1 ID=prot_H-elongata_contig16013.3863.1|Name=mRNA_H-elongata_contig16013.3863.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp
QLASLVTTLNSCKEFGFDMEAHNARTYHGLTCLLQISTKSKDFIVDPLVE
GMWESMTQLRGPFANPDILKIGHSIRSCDIPSLFRDFGIVVVNAFDTEEA
VHALGEKHSGLARVLKNAGIEELHDIAGLKHIMQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0025623'-5'_exonuclease_dom
IPR012337RNaseH-like_sf