prot_H-elongata_contig15979.3849.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15979.3849.1
Unique Nameprot_H-elongata_contig15979.3849.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length383
Homology
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: D8LI35_ECTSI (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI35_ECTSI)

HSP 1 Score: 550 bits (1417), Expect = 4.860e-193
Identity = 280/397 (70.53%), Postives = 318/397 (80.10%), Query Frame = 0
Query:    1 MGRFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEEPDWVSAVAGCGKGVKTFVTGCYDGFLRVYGPDCKEVSTAKAHRSPVTGLCAVPSA-----GGINGAGLLSGSKDMTGRMWRIHGSGSNASLEAAAVLRGHDSSISAVHASES---------MAYTGDWGGHVCMWDVSCLGAGADRGEVSNKGTKRRKT--GSNETEAVALLEPSPVARFRGHAQAVTGLASPVG-GQPQ-------QQLLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGCSSSGRMLATGHPDARVRIWDTRMKGETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCCGWQDGKIISGGADGAVKTFVVPE 373
            MGRFLRSSLR+VM+RHALSGEA+LEVEY+PALRQPTEAEHA++PDWVSAVAG G G++TFVTGCYDG LRVYGP CK  S  KAH++PVT LCAVPS      GG + AG LSGSKDMT R+WR  GSG N+SLEAAA+LRGH +SISA HA+ S          AYTGDW GHVC+WDV+CL  G   G+ + +GTKRRKT  G+       + E +P+A FR HAQAVTGLA P G G+PQ          LYSASLDRAVKTWD ERQDC+HTLN P+A+TCLGCS SGRMLATGHPDARVRIWDTR +GETLTRASLSSH QW++GV WAP SETM+LSCSHDG+VKLWDIRST+PLHSA+AH GKA CCGWQDGKI+SGG DGAVKT+VVPE
Sbjct:   66 MGRFLRSSLRSVMQRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSAVAGAGAGLETFVTGCYDGCLRVYGPGCKVTSLEKAHQAPVTALCAVPSLAGGRPGGAHAAGFLSGSKDMTARLWRRAGSGGNSSLEAAAILRGHANSISAAHAAASGSGDSGGAPRAYTGDWSGHVCLWDVACLEGGHADGDDA-QGTKRRKTDTGAAAXXXXXVTELTPLASFRAHAQAVTGLAGPGGVGRPQTAAVVVPSSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTRTQGETLTRASLSSHKQWVTGVKWAPGSETMVLSCSHDGSVKLWDIRSTLPLHSAQAHRGKALCCGWQDGKIVSGGEDGAVKTYVVPE 461          
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: A0A6H5KQ32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ32_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 6.200e-99
Identity = 147/202 (72.77%), Postives = 164/202 (81.19%), Query Frame = 0
Query:  182 GTKRRKT--GSNETEAVALLEPSPVARFRGHAQAVTGLASPVG-GQPQ-------QQLLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGCSSSGRMLATGHPDARVRIWDTRMKGETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCCGWQDGKIISGGADGAVKTFVVPE 373
            GTKRRKT  G+      A+ E +P+A FR H+QAVTGL  P G G PQ          LYSASLDRAVKTWD ERQDC+HTLN P+A+TCLGCS SGRMLATGHPDARVRIWDTR +GETLTRASLSSH QW++ V WAP SETM+LSC HDGAVKLWDIRST+PLHSA+AH+GKA CCGWQDGKI+SGG DGAVKT+VVPE
Sbjct:   10 GTKRRKTDTGAAAAAVAAVTELTPLAGFRAHSQAVTGLVGPGGVGGPQTAAVVVPSSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTRTQGETLTRASLSSHKQWVTDVKWAPGSETMVLSCGHDGAVKLWDIRSTLPLHSAQAHQGKALCCGWQDGKIVSGGEDGAVKTYVVPE 211          
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: A0A836CE58_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE58_9STRA)

HSP 1 Score: 234 bits (598), Expect = 4.200e-69
Identity = 154/408 (37.75%), Postives = 205/408 (50.25%), Query Frame = 0
Query:    2 GRFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEEPDWVSAVAGCGKGVKT---------FVTGCYDGFLRVYGPD--CKEVSTAKAHRSPVTGLCAVPSAGGINGAGLLSGSKDMTGRMWRI------------HGSGSNASLEAAAVLRGHDSSISAVHASES----MAYTGDWGGHVCMWDVSCL--GAGADRGEVSNKGTKRRKTGSNETEAVALLEPSPVARFRGHAQAVTG--LASPVGGQPQQQLLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGC------SSSGRMLATGHPDARVRIWDTRMK-GETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCCGWQDGKIISGGADGAVKTFVV 371
            GRFLR+SL   M+ HA+SGE +LE+EY+PALRQPTE     +PDWVSA+A C     T           + CYDG LR+YG         +A+    P+T L A                 D   R W +                     E AAVL GH +S++AV  S +     A +GDW G +C+WD++     AGAD  E    G KRRK  + E +AV ++E  P A F+ H+QAVTG  LA P         LY+ S D ++K WD +RQDCV T+   +A+ C+        +++  +LATGHPD R+R+WD R K GETLT A+L++   W+ GV WA  S                   S   L +  AH+G A C  W  G + SGG DG V+TF V
Sbjct:  100 GRFLRTSLARYMRAHAVSGETVLELEYLPALRQPTEESADTQPDWVSALAACAGAAGTGGERVAGPFLASACYDGCLRLYGASGGLDIAHSARVSAQPLTALAAXXXXXXXX--------XDDAERCWLLAXXXXXXXXXXXXXXXXXXXXEQAAVLSGHQNSVAAVSFSPAGGTHTAASGDWDGRMCLWDLAAAQGAAGADA-EAGGPGVKRRKRAAGEADAV-VVELEPTAVFKAHSQAVTGVYLAGP-------DTLYTGSWDHSLKAWDAQRQDCVRTMACAKAVACMDAQGGDDAAAASGLLATGHPDGRIRVWDVRTKAGETLTLATLAARGGWVYGVKWAHGSAYNXXXXXXXXXXXXXXXXSGAALRTLPAHKGAALCVAWHAGGVASGGDDGVVRTFKV 490          
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: A0A2D4C6Q8_PYTIN (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6Q8_PYTIN)

HSP 1 Score: 218 bits (555), Expect = 7.060e-62
Identity = 138/380 (36.32%), Postives = 208/380 (54.74%), Query Frame = 0
Query:    2 GRFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEEPDWVSAVAGCGKGVKTFVTGCYDGFLRVYGPDCKEVSTAKAHRSPVTGLCAVPSAGGINGAGLLSGSKDMTGRMWRIHGSGSNASLEAAAVLRGHDSSISAV--HASESMAYTGDWGGHVCMWDVSCLGAGADRGEVSN-KGTKRRKTGSNETEAVALLEPSPVARFRGHAQAVTGLASPVGGQPQQQLLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGCSSSGRMLATGHPDARVRIWDTR--MKGETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCCGWQDG-----KIISGGADGAVKTFVV 371
            G FLR+SL   M+RHALS E++L +EY+ AL +P++      PDWVSAV+     V   VTGCYDG +RVY  +   +++ KAH+  V  +    +   +    + S  KD  G++WR + +     L A A L GH +S+ A+   A    A TG W   V +W V    +G++  EVS+ +  K++K+ +  +  V+  +        GH   VTG+A       Q   + SA  DR+++ WD     C  T+   RAIT +  +++G M+ T HPD  VR+WD R    GE+L + +  SH +W++ V+W P +E + LS  +DGAVK+WD+RST+PLH+  AH+GKA    W+         +SGG D  +K F V
Sbjct:  227 GNFLRTSLEKYMQRHALSEESMLTLEYVEALPEPSQKNETNHPDWVSAVSAAQDIV---VTGCYDGQVRVYDLEGNCLASVKAHQGAVKAVSVQLAKQNV--FLITSSGKDQMGQVWRFNAA--TRQLSAVASLTGHLNSVDAIALDARAERALTGSWDNTVRVWMVP---SGSEAVEVSDAQPKKKQKSDAKSSGVVSFSQLEAEIVLVGHTSYVTGVAFHPTDAHQ---VVSAGSDRSIRLWDLTTHQCKQTMKGNRAITSVSVNANG-MVVTAHPDHCVRLWDPRATQNGESLVQRTFQSHREWVNAVSWHPTNEHLFLSGGYDGAVKVWDVRSTIPLHTVAAHDGKALDVAWRPVDEPAVSFVSGGEDKQLKLFSV 592          
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: A0A8K1CSP5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSP5_PYTOL)

HSP 1 Score: 211 bits (538), Expect = 5.180e-61
Identity = 138/381 (36.22%), Postives = 199/381 (52.23%), Query Frame = 0
Query:    2 GRFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEEPDWVSAVAGCGKGVKTFVTGCYDGFLRVYGPDCKEVSTAKAHRSPVTGLCAVPSAGGINGAG--LLSGSKDMTGRMWRIHGSGSNASLEAAAVLRGHDSSISAV--HASESMAYTGDWGGHVCMWDVSCLGAGADRGEVSNKGTKRRKTGSNETEAVALLEPSPVARFRGHAQAVTGLASPVGGQPQQQLLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGCSSSGRMLATGHPDARVRIWDTR--MKGETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCCGWQDGK-----IISGGADGAVKTFVV 371
            G FLR+SL   M+R+A+S E+LL +EY+ AL +P +      PDWVSAV+   K V   VTGCYDG +RVY    + +++ KAH+  V  +    S   I G    + S  KD  G++WR + S     L A A L GH +S+  +  H+    A TG W   V +W +       +  E   K  K++K  +  +  V+  +        GH   VTG+A       Q+  + S + DR V+ WD     C  TL   RAIT +  +++G +L T HPD  VR+WD R    GE + + +  SH +W+S V W   +E +  SC +DGAVK+WD+RSTVP+H+  AHEGKA    W+         +SGG D  +K + V
Sbjct:   59 GVFLRTSLDKYMQRNAVSEESLLILEYVEALPEPEQKNETNHPDWVSAVS-VAKDV--IVTGCYDGQVRVYDLKGECLASVKAHQGAVKAV----SVQFIQGKEYRITSSGKDQMGQVWRFNASSKQ--LSAVAALTGHLNSVDTIQLHSGGRQALTGSWDNTVRVWHLPEDDNAGEDDEAQPK--KKQKNSAKSSGTVSFRQVEAEIILTGHTSYVTGVAF---HPTQEDYVVSGASDRTVRFWDLTTHLCKQTLTGNRAITDISVNANGLVL-TAHPDNCVRLWDPRASQSGENIVQKTFQSHTEWVSAVEWHQQNENLFASCGYDGAVKVWDVRSTVPIHTIAAHEGKALDVAWRPVSEPAVAFVSGGEDKQLKVYSV 424          
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: A0A7S0L654_9EUKA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L654_9EUKA)

HSP 1 Score: 205 bits (522), Expect = 1.730e-58
Identity = 132/385 (34.29%), Postives = 191/385 (49.61%), Query Frame = 0
Query:    2 GRFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEEPDWVSAVAGC------------GKGVKTFVTGCYDGFLRVYGPDCKEVSTAKAHRSPVTGLCAVPSAGGINGAGL-LSGSKDMTGRMWRIHGSGSNA-SLEAAAVLRGHDSSISAVHASES--MAYTGDWGGHVCMW---DVSCLGAGADRGEVSNKGTKRRKTGSNETEAVALLEPSPVARFRGHAQAVTGLASPVGGQPQQQLLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGCSSSGRMLATGHPDARVRIWDTRMKGETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCCGWQDG-KIISGGADGAV 366
            G  LR SL   M RH L+GE  + +EY+  L  P  A  +  PDWVS+VA               + V   ++GCYDG  R +GP  + V T + H S V  +C +       G GL L+ SKD T R W    +     + +   +  GH  S+ A  A+ +     +G W G +C+W   D S   A  D    +    KR +T        A+ E  P+++ + H++ ++GL           LLYSAS D  V+ WD   +     + + +A+ CL  S +   + TGH D  +R+WD R +G  L+     +H  W+SGVAWAP    +L S SHDG+V+LWD RSTVPLH   AH+ K+ C  W    +++SGGADG +
Sbjct:   73 GELLRGSLEKAMTRHGLTGEQAVMIEYVELLAPPNLACDSNHPDWVSSVASARTHAMLSGDPTASERVPLVLSGCYDGSGRAWGPGGELVCTMQGHTSGVKAVCWL-------GRGLALTASKDRTLRAWSFQSAAKEQLTAKCEQLYVGHTDSVEAACANPAGDRFCSGGWDGQLCIWRAPDTSVSTAEVDHEPAA----KRART-------PAVSEAHPLSKMQAHSECLSGLCWRTAA-----LLYSASWDGTVREWDVNAESSTSAVTSQKAVLCLDVSLASASIVTGHSDHCLRVWDVRQRG--LSARLTLAHKSWVSGVAWAPHQPLLLASASHDGSVRLWDTRSTVPLHELPAHKPKSLCVSWDGSDRLVSGGADGVL 432          
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: A0A5D6YFB0_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFB0_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.150e-57
Identity = 135/381 (35.43%), Postives = 192/381 (50.39%), Query Frame = 0
Query:    2 GRFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEEPDWVSAVAGCGKGVKTFVTGCYDGFLRVYGPDCKEVSTAKAHRSPVTGLCAVPSAGGINGAGLLSGSKDMTGRMWRIHGSGSNASLEAAAVLRGHDSSISAV--HASESMAYTGDWGGHVCMWDV-SCLGAGADRGEVSNKGTKRRKTGSNETEAVALLEPSPVARFRGHAQAVTGLASPVGGQPQQQ-LLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGCSSSGRMLATGHPDARVRIWDTRMK--GETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCCGW--QDGKII---SGGADGAVKTFVV 371
            G+FLR+SL   + +H  S EALL +EY+ AL +P +   A  PDWVSAVA    G+   VTGCYDG +RV+    + V+  KAH   V  +             + +  KD TG++W    +     + A A   GH +S+ AV    +   A TG W   V +WD  + + A                  ++   AV+  +        GH   VTG+A      PQ + L+ S + DR+V+ WD     C  TL   RAIT +  ++ G +L+  HPD  VR+WD R    GE+L + + SSH +W+S V W P   T+  S S+DG+VK+WD RS+VPLH+  AH+GKA    W  +D   +   SGG D  +K F V
Sbjct:   62 GQFLRTSLEKYLLQHGASEEALLTLEYVEALPEPEKQREANHPDWVSAVAAAHTGL--VVTGCYDGHVRVHDAAGECVAALKAHHGAVKAVSVQRVPEKKREFVIATSGKDQTGQLWLFDAAKKR--ISALAAFTGHLNSVDAVALRVTGEQALTGSWDNTVRVWDTKAAVSAAXXXXXXXXXXXXXXXXXASGASAVSFRQLEAEVVLVGHTSFVTGVAF----HPQHEHLVVSGASDRSVRVWDLTTHSCAQTLTGNRAITDISVNADGLVLSA-HPDHCVRLWDPRASQAGESLVQRTFSSHKEWVSAVEWHPTRATLFASASYDGSVKVWDARSSVPLHTLAAHDGKALDVAWRLEDAAHVAFASGGEDKQLKFFSV 433          
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: A0A1Y1IFE5_KLENI (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFE5_KLENI)

HSP 1 Score: 197 bits (502), Expect = 1.090e-55
Identity = 129/376 (34.31%), Postives = 193/376 (51.33%), Query Frame = 0
Query:    2 GRFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEEPDWVSAVAGCGKGVKTFVTGCYDGFLRVYGPDCKEVSTAKAHRSPVTGLCAVPSAGGINGAGLLSGSKDMTGRMWRIHGSGSNASLEAAAVLRGHDSSISAVHASES--MAYTGDWGGHVCMWDVSCLGAGADRGEVSNKGTKRRKTGSNETEAVALLEPSPVAR--FRGHAQAVTGLASPVGGQPQQQLLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGCSSSG-RMLATGHPDARVRIWDTRMKGETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCCGW-QDGKIISGGADGAVKTFVV 371
            G  LR+SL +++    LS E  L +EY+PA+  P         DWVSA+ G    V   V+GCYDG  R++    + +++ + H   +T    +P A G     +++ SKD T R+W++ G+ S  S +   VLRGH ++I +V AS S     +G W   + +W VS     A+ G  + K  +   +G+    A A  + +  AR    GH+Q V+ +        +   ++SAS D +V+TWD +      T+   + I  L     G  +LATG  D  +RIWD+R    T +   L SH  WI+ V W       LLS SHDG VK+WD+RS VPLH+ +AH  KA C  W Q+  I+SGGAD  ++   +
Sbjct:   63 GELLRTSLESLLVSKKLSAETTLTIEYIPAVGLPKPVSSHVHDDWVSAINGTSPDV--LVSGCYDGVARLWSSSGEALTSLQGHSDAITSTAVIPRASGS--CDVITASKDRTLRVWQVKGTDSQPSGDLHQVLRGHSAAIQSVVASPSGNEVASGSWDTTIKVWSVS---RDAEDGGSAPKRQRVEDSGA----APAGEQEAREARVTLEGHSQCVSAV-----DWSRADTIHSASWDHSVRTWDVQAAVNTSTITGSKVILALSVGGEGGALLATGGADPAIRIWDSRDSSSTGSAIQLLSHKGWITAVKWHKTRTHQLLSTSHDGTVKMWDVRSKVPLHTVQAHTVKALCVDWFQEATIVSGGADNQLRFHAL 422          
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: A0A7S3Q0R3_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0R3_9STRA)

HSP 1 Score: 194 bits (493), Expect = 5.370e-54
Identity = 131/384 (34.11%), Postives = 199/384 (51.82%), Query Frame = 0
Query:    3 RFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEE-PDWVSAVAGCGKGVKTFVTGCYDGFLRVYGPDCKEVS-----TAKAHRSPVTGLCAVPSAGGINGAGLLSGSKDMTGRMWRIHGSGSNASLEAAAVLRGHDSSISAVH-----ASESMAYTGDWGGHVCMWDVSCLGAGADRGEVSNKGTKRRKTGSNETEAVALLEPSPVARFRGHAQAVTGLASPVGGQPQQQLLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGCSSSGRMLATGHPDARVRIWDTRM----KGETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHE--GKAFCCGWQDGKIISGGADGAVKTF 369
            + LR S+ A  +R  LS E  +E++Y PA + P E   +E  P+W+SA++          TG  DG +R++ P  ++ S       KAH  P+  L +  S   ++   + +GS D T  +   + +G    L       GH SSI++V      +  +MA +GDW G +C+W V      +D  E +    KRRK  S+  +AV   E SP   F+ H+  ++G++           + ++S D ++KTWD E Q+ + TLN  + +T LG   +  ++ATGHPD  VR+WD R     +G         SH  WIS V W+P    ++ S SHDG+VK+WDIRS+VPLH+ +AH    KA C  + +  I SGG+D  VK F
Sbjct:   93 KLLRMSVEAAARREGLSLEQAVEIQYFPARQAPEEEGESESLPEWISAMSSSSD---LLWTGNCDGSIRLFSPANEKGSLIQTDVVKAHSGPIKCLSSSTSHDNVDSTIVATGSMDQT-LLTHSYETGGKLVLHTV-YTGGHTSSINSVRLLCDKSGVTMA-SGDWDGGLCIWKVP-----SDTNESAKPREKRRKGSSDANDAVR--EASPFYCFKAHSNNISGIS---WSSESSNTIITSSWDHSIKTWDVESQNNILTLNGSKVVTALGRCHNSDVVATGHPDCTVRLWDMRSSSKNEGNVFDNTLRPSHRSWISAVEWSPVDPFVMASTSHDGSVKVWDIRSSVPLHTIKAHAKGSKALCLSFTEKAIFSGGSDCIVKQF 460          
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: D0NDP0_PHYIT (Ribosome biogenesis protein WDR12 homolog n=12 Tax=Phytophthora TaxID=4783 RepID=D0NDP0_PHYIT)

HSP 1 Score: 192 bits (487), Expect = 1.840e-53
Identity = 132/381 (34.65%), Postives = 195/381 (51.18%), Query Frame = 0
Query:    2 GRFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEEPDWVSAVAGCGKGVKTFVTGCYDGFLRVYGP--DCKEVSTAKAHRSPVTGLCAVPSAGGINGAGLLSGSKDMTGRMWRIHGSGSNASLEAAAVLRGHDSSISAV--HASESMAYTGDWGGHVCMWDVSCLGAGADRGEVSNKGTKRRKTGSNETEAVALLEPSPVARFRGHAQAVTGLA-SPVGGQPQQQLLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGCSSSGRMLATGHPDARVRIWDTRMK--GETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCCGWQDGK----IISGGADGAVKTFVV 371
            G FLRSSL   ++ + +S EALL +EY+ AL +P +   ++ PDWVSAVA      +  VTGCYDG LRVY    DCK  ++ KAH+  V  +    S  G     + S  KD   ++WR     S   L   A L GH +S+ AV  HAS +   TG W   V +W       G++         K +KT  ++  AV+  +        GH   VTG+A  P   +  + ++ SA  DR+V+ WD   Q C   L   RA++ L  +++G +L T HP         R +  GE++ + +  SH +W+S V+W P +E + +S  +DG  K+WD RST+PLH+  AHEGK     W++ +     ++GG D  +  F V
Sbjct:   60 GLFLRSSLDKYLQTNDVSEEALLTLEYVEALPEPQKQNGSDHPDWVSAVASLDD--ELVVTGCYDGVLRVYDAQGDCK--ASVKAHQGAVKAVSVSSSKSGE--FVVASSGKDQLAQLWRYTVKSSK--LSPLAALTGHLNSVDAVQLHASGNRVVTGSWDNTVRVWQTP---NGSEDSSEQRSSKKHKKT-EDDAGAVSFRQLEAEIVLVGHTSYVTGVAFRPKTSEHDEDVVVSAGSDRSVRLWDLVTQSCSQALAGNRAVSDLTVNATGLIL-TAHPXXXXXXXXPRAQQSGESIVQRTFRSHKEWVSSVSWHPSNEHLFVSGGYDGTAKVWDARSTIPLHTVSAHEGKVLDLSWRNQEESVAFVTGGDDKKLNFFNV 427          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI35_ECTSI4.860e-19370.53Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A6H5KQ32_9PHAE6.200e-9972.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CE58_9STRA4.200e-6937.75Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A2D4C6Q8_PYTIN7.060e-6236.32Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A8K1CSP5_PYTOL5.180e-6136.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S0L654_9EUKA1.730e-5834.29Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A5D6YFB0_9STRA1.150e-5735.43Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A1Y1IFE5_KLENI1.090e-5534.31Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A7S3Q0R3_9STRA5.370e-5434.11Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
D0NDP0_PHYIT1.840e-5334.65Ribosome biogenesis protein WDR12 homolog n=12 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 271..285
score: 34.61
coord: 317..331
score: 38.14
coord: 230..244
score: 36.8
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 75..119
e-value: 1.4
score: 16.2
coord: 200..243
e-value: 0.13
score: 21.3
coord: 333..370
e-value: 3.8
score: 13.4
coord: 290..330
e-value: 1.7E-7
score: 40.9
coord: 33..73
e-value: 16.0
score: 9.5
coord: 128..165
e-value: 0.26
score: 20.4
coord: 246..284
e-value: 6.5E-6
score: 35.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 296..330
e-value: 2.6E-5
score: 24.9
coord: 248..284
e-value: 7.0E-4
score: 20.4
coord: 134..165
e-value: 0.11
score: 13.5
coord: 203..243
e-value: 0.013
score: 16.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 207..252
score: 9.005
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 297..339
score: 14.251
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 259..293
score: 9.205
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 26..374
e-value: 4.0E-61
score: 208.7
NoneNo IPR availablePANTHERPTHR19855WD40 REPEAT PROTEIN 12, 37coord: 15..373
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 317..331
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 271..285
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 230..244
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 207..379
score: 22.544
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 82..174
score: 9.151
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 44..372

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15979contigH-elongata_contig15979:56..5638 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15979.3849.1mRNA_H-elongata_contig15979.3849.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15979 2..6694 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15979.3849.1 ID=prot_H-elongata_contig15979.3849.1|Name=mRNA_H-elongata_contig15979.3849.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=383bp
MGRFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEEPDWVSAV
AGCGKGVKTFVTGCYDGFLRVYGPDCKEVSTAKAHRSPVTGLCAVPSAGG
INGAGLLSGSKDMTGRMWRIHGSGSNASLEAAAVLRGHDSSISAVHASES
MAYTGDWGGHVCMWDVSCLGAGADRGEVSNKGTKRRKTGSNETEAVALLE
PSPVARFRGHAQAVTGLASPVGGQPQQQLLYSASLDRAVKTWDTERQDCV
HTLNTPRAITCLGCSSSGRMLATGHPDARVRIWDTRMKGETLTRASLSSH
VQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCC
GWQDGKIISGGADGAVKTFVVPESSRSNKDDP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf