prot_H-elongata_contig159718.3847.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig159718.3847.1
Unique Nameprot_H-elongata_contig159718.3847.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
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BLAST of mRNA_H-elongata_contig159718.3847.1 vs. uniprot
Match: D7FPH1_ECTSI (Formin-like 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPH1_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 4.400e-12
Identity = 30/47 (63.83%), Postives = 40/47 (85.11%), Query Frame = 0 
Query:    5 LDEPQDRMETLETEYARVQGNYDRVAKRFGEDPTKVPSGEFFSLMSV 51
            L++ + +ME+LE EY RVQG+Y+  AKRFGEDPTKVPSG+FF+L+S 
Sbjct: 1031 LEKAKSQMESLEAEYERVQGDYNNAAKRFGEDPTKVPSGDFFALVSA 1077
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig159718.3847.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FPH1_ECTSI4.400e-1263.83Formin-like 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 12..32
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 2..49
IPR042201Formin, FH2 domain superfamilyGENE3D1.20.58.2220coord: 1..51
e-value: 2.3E-8
score: 35.6
IPR015425Formin, FH2 domainPROSITEPS51444FH2coord: 1..51
score: 9.668

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig159718contigH-elongata_contig159718:442..594 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig159718.3847.1mRNA_H-elongata_contig159718.3847.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig159718 442..603 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig159718.3847.1 ID=prot_H-elongata_contig159718.3847.1|Name=mRNA_H-elongata_contig159718.3847.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
MRHCLDEPQDRMETLETEYARVQGNYDRVAKRFGEDPTKVPSGEFFSLMS
V
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042201FH2_Formin_sf
IPR015425FH2_Formin