prot_H-elongata_contig159661.3845.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig159661.3845.1
Unique Nameprot_H-elongata_contig159661.3845.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length41
Homology
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BLAST of mRNA_H-elongata_contig159661.3845.1 vs. uniprot
Match: D7FP24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP24_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 4.470e-10
Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:    1 EQIERSLDVWASDPRYHAVNAFCSEGGAPPIVLGEWLPNG 40
            +Q ER+L++ ++DPR   +N FCS  GAPP VLGEWLPNG
Sbjct:   72 DQTERALELLSADPRCRTLNDFCSSDGAPPTVLGEWLPNG 111
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig159661.3845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FP24_ECTSI4.470e-1060.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig159661contigH-elongata_contig159661:1199..1321 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig159661.3845.1mRNA_H-elongata_contig159661.3845.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig159661 1199..1321 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig159661.3845.1 ID=prot_H-elongata_contig159661.3845.1|Name=mRNA_H-elongata_contig159661.3845.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=41bp
EQIERSLDVWASDPRYHAVNAFCSEGGAPPIVLGEWLPNG*
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