prot_H-elongata_contig15959.3843.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15959.3843.1
Unique Nameprot_H-elongata_contig15959.3843.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length245
Homology
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BLAST of mRNA_H-elongata_contig15959.3843.1 vs. uniprot
Match: D7FTY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY1_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 3.950e-14
Identity = 44/92 (47.83%), Postives = 61/92 (66.30%), Query Frame = 0 
Query:    5 LGAGGSSRARINKQFIVNTVDGLKSHNRREEEEDCWRQHRLELETQHRM-SQTASRRRKNKKNAKGINASVPSNATDERQFWAQAKAQAMGA 95
            +  GGS RA +NK F++NTV GLKSHN+REEEEDCWRQH LE   + R+ +  A+R R+N     G  ++  ++  D R+FWA+ K + M A
Sbjct:    6 MSRGGSGRAGVNKNFLLNTVHGLKSHNKREEEEDCWRQHGLEQRARERLLAHDANRNRRNVPADGGDTSASHASDVDARRFWAERKERTMTA 97
[Close]
BLAST of mRNA_H-elongata_contig15959.3843.1 vs. uniprot
Match: A0A6H5KLX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX3_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 5.070e-13
Identity = 44/92 (47.83%), Postives = 61/92 (66.30%), Query Frame = 0 
Query:    5 LGAGGSSRARINKQFIVNTVDGLKSHNRREEEEDCWRQHRLELETQHRMSQTASRRRKNKKNAKGINASVP-SNATDERQFWAQAKAQAMGA 95
            +  GGSSRA +NK F++NTV GL+SHN+REEEEDCWRQ+ LE   + R+    + R + K  A G + S   ++  D R+FWA+ K +AM A
Sbjct:   17 MSRGGSSRAGVNKNFLLNTVHGLQSHNKREEEEDCWRQYGLEQRARERLLAHDANRNRQKFPADGGDTSASHASDVDARRFWAERKERAMTA 108
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15959.3843.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTY1_ECTSI3.950e-1447.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLX3_9PHAE5.070e-1347.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15959contigH-elongata_contig15959:4898..5632 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15959.3843.1mRNA_H-elongata_contig15959.3843.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15959 4886..5960 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15959.3843.1 ID=prot_H-elongata_contig15959.3843.1|Name=mRNA_H-elongata_contig15959.3843.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=245bp
MERSLGAGGSSRARINKQFIVNTVDGLKSHNRREEEEDCWRQHRLELETQ
HRMSQTASRRRKNKKNAKGINASVPSNATDERQFWAQAKAQAMGAAQSDG
TQISPPLASIESGTSLTFSGQAVAREVQERYTGKTERSEEIKDEVGNKDR
LEEWCRLEQCQGPPKSKKHKRGRRDKGISASNSISTIHCNSLNGREGDLD
NLDSESKESRRHANSATDCGKRQDIDNSRRNRKKKKRSKDKRKK*
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