prot_H-elongata_contig15943.3833.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15943.3833.1
Unique Nameprot_H-elongata_contig15943.3833.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length108
Homology
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BLAST of mRNA_H-elongata_contig15943.3833.1 vs. uniprot
Match: A0A6H5JK37_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK37_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.570e-20
Identity = 52/77 (67.53%), Postives = 57/77 (74.03%), Query Frame = 0 
Query:    1 LLGGARDPECHVSASACGRDDGRDALALSSMKGALSIDWSSGSTSRSNAAAYADATAAYERETFAEAFLPPPAGSAS 77
            LL  ARDP CH SA+ACGRDDGRDALALSSM GALSIDW+   TSR++A AY D   A  RE+ A  F PPPAG AS
Sbjct:  251 LLSAARDPTCHASAAACGRDDGRDALALSSMSGALSIDWALMPTSRTSAEAYVDPAVALGRESPASDFFPPPAGDAS 327
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BLAST of mRNA_H-elongata_contig15943.3833.1 vs. uniprot
Match: D8LN78_ECTSI (Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN78_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 2.140e-20
Identity = 57/103 (55.34%), Postives = 63/103 (61.17%), Query Frame = 0 
Query:    1 LLGGARDPECHVSASACGRDDGRDALALSSMKGALSIDWSSGSTSRSNAAAYADATAAYERETFAEAFLPPPAGSASTTRAFCSPAEGGGEVLKGAAPSRNGC 103
            LL  ARDP CH SA+ACGRDDGRDALALSSM GALSIDW+   TSR++  A  D   A  RE  A  F PPPAG AS    F  P+       +G  PSR  C
Sbjct:  273 LLSAARDPTCHASAAACGRDDGRDALALSSMSGALSIDWALMPTSRTSVEACMDPAVALGREGLASDFFPPPAGDASPVVPFSGPSG-----PRGTPPSRAAC 370
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15943.3833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JK37_9PHAE1.570e-2067.53Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LN78_ECTSI2.140e-2055.34Tyrosine kinase specific for activated (GTP-bound)... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15943contigH-elongata_contig15943:2323..3226 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15943.3833.1mRNA_H-elongata_contig15943.3833.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15943 2321..3226 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15943.3833.1 ID=prot_H-elongata_contig15943.3833.1|Name=mRNA_H-elongata_contig15943.3833.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp
LLGGARDPECHVSASACGRDDGRDALALSSMKGALSIDWSSGSTSRSNAA
AYADATAAYERETFAEAFLPPPAGSASTTRAFCSPAEGGGEVLKGAAPSR
NGCYLKPP
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