prot_H-elongata_contig15939.3830.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15939.3830.1
Unique Nameprot_H-elongata_contig15939.3830.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length49
Homology
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BLAST of mRNA_H-elongata_contig15939.3830.1 vs. uniprot
Match: D8LHH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH6_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 7.630e-20
Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 0 
Query:    2 HPTEEYRISLKLTSGALRMFSLSPGSKNAYPFWTLEDQITTFLKVY 47
            HPTE+YRISLKLTSGALRMF LSPGSKNAYPFWTLED+ITTFL+ Y
Sbjct: 4407 HPTEQYRISLKLTSGALRMFFLSPGSKNAYPFWTLEDKITTFLQAY 4452
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BLAST of mRNA_H-elongata_contig15939.3830.1 vs. uniprot
Match: A0A6H5KWQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ8_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 7.630e-20
Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 0 
Query:    2 HPTEEYRISLKLTSGALRMFSLSPGSKNAYPFWTLEDQITTFLKVY 47
            HPTE+YRISLKLTSGALRMF LSPGSKNAYPFWTLED+ITTFL+ Y
Sbjct: 3230 HPTEQYRISLKLTSGALRMFFLSPGSKNAYPFWTLEDKITTFLQAY 3275
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15939.3830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHH6_ECTSI7.630e-2089.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWQ8_9PHAE7.630e-2089.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15939contigH-elongata_contig15939:4776..4922 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15939.3830.1mRNA_H-elongata_contig15939.3830.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15939 4776..4952 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15939.3830.1 ID=prot_H-elongata_contig15939.3830.1|Name=mRNA_H-elongata_contig15939.3830.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=49bp
MHPTEEYRISLKLTSGALRMFSLSPGSKNAYPFWTLEDQITTFLKVYA*
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