prot_H-elongata_contig158840.3810.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig158840.3810.1
Unique Nameprot_H-elongata_contig158840.3810.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length57
Homology
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BLAST of mRNA_H-elongata_contig158840.3810.1 vs. uniprot
Match: D8LFW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFW8_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 5.290e-14
Identity = 33/50 (66.00%), Postives = 41/50 (82.00%), Query Frame = 0 
Query:    1 QAFCALTELSGEAAAEVRGVASEVWFSYLERLTLPPACGHSGVRVRDDFR 50
            +AFC+   LS +A AE+R V+S+VWFSYLER TLP ACG+ G+RVRDDFR
Sbjct:  154 KAFCSAAALSRDATAEMRRVSSDVWFSYLERFTLPEACGNGGIRVRDDFR 203
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig158840.3810.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFW8_ECTSI5.290e-1466.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig158840contigH-elongata_contig158840:929..1099 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig158840.3810.1mRNA_H-elongata_contig158840.3810.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig158840 929..1099 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig158840.3810.1 ID=prot_H-elongata_contig158840.3810.1|Name=mRNA_H-elongata_contig158840.3810.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=57bp
QAFCALTELSGEAAAEVRGVASEVWFSYLERLTLPPACGHSGVRVRDDFR
YQANLS*
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