prot_H-elongata_contig158385.3785.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig158385.3785.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE) HSP 1 Score: 115 bits (289), Expect = 1.670e-27 Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 0
Query: 2 DLECWQLDYNTAFLNAKVEEEVYVKMAPGYEEFNNDGIPMVMRLLKSLYGLRQSPRCWYGTVDEHVVEIGFRSLKSDPCVYIYSEGGAIYILTLYVDDVLLL 103
DL+ QLD TAFL A +EE V+V+MAPGYE N + + +VM+L KSL GL QSP+ W T+D +VEIGF LKSD CVYIY + +LTLYVDD+L++
Sbjct: 404 DLDVIQLDVKTAFLYADIEENVFVEMAPGYEAKNMEELQLVMKLEKSLDGLAQSPQDWLKTIDSSLVEIGFFPLKSDTCVYIYDHNNTVVVLTLYVDDLLII 505
BLAST of mRNA_H-elongata_contig158385.3785.1 vs. uniprot
Match: A0A6H5KUT9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUT9_9PHAE) HSP 1 Score: 115 bits (287), Expect = 2.850e-27 Identity = 55/104 (52.88%), Postives = 75/104 (72.12%), Query Frame = 0
Query: 1 LDLECWQLDYNTAFLNAKVEEEVYVKMAPGYEEFNNDGIPMVMRLLKSLYGLRQSPRCWYGTVDEHVVEIGFRSLKSDPCVYIYSEGGAIYILTLYVDDVLLLG 104
+D E QLD T+FL A +EE+V+VKMAPG+E N +G +VM+L SLYGL QSP+ W+ T+D ++E+GF LKS+ CVYIY + I+TLYVDD L++G
Sbjct: 364 MDWEVRQLDVKTSFLYADLEEDVFVKMAPGFEARNANGHKLVMKLGVSLYGLAQSPQNWWKTIDPKLIELGFEPLKSESCVYIYQRNNTVVIITLYVDDRLVIG 467
BLAST of mRNA_H-elongata_contig158385.3785.1 vs. uniprot
Match: A0A7D9H832_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9H832_PARCT) HSP 1 Score: 105 bits (261), Expect = 3.400e-25 Identity = 48/104 (46.15%), Postives = 70/104 (67.31%), Query Frame = 0
Query: 3 LECWQLDYNTAFLNAKVEEEVYVKMAPGYEEFNNDGIPMVMRLLKSLYGLRQSPRCWYGTVDEHVVEIGFRSLKSDPCVYIYSEGGAIYILTLYVDDVLLLGKD 106
L+ Q+D TAFLN ++EEVY+K G+ E + + V RL +S+YGL+QSPRCW +D + +GF + DPC+Y+ EGG I+I+ +YVDD+LL GK+
Sbjct: 61 LKLHQMDVTTAFLNGDLKEEVYMKQPEGFIEKGKEHL--VCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQITGDPCIYVKEEGGEIFIIAVYVDDILLAGKN 162
BLAST of mRNA_H-elongata_contig158385.3785.1 vs. uniprot
Match: A0A6H5K066_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K066_9PHAE) HSP 1 Score: 105 bits (261), Expect = 1.920e-24 Identity = 52/102 (50.98%), Postives = 70/102 (68.63%), Query Frame = 0
Query: 6 WQLDYNTAFLNAKVEEEVYVKMAPGYEEFNN-DGIPMVMRLLKSLYGLRQSPRCWYGTVDEHVVEIGFRSLKSDPCVYIYSEGGAIYILTLYVDDVLLLGKD 106
+QLD AFLNA + +VYV+ APG N+ G PMV +L +SLYGL QSP W T+DE + G++ +SDPCVY+Y+ G I ILT+YVDD+L++G D
Sbjct: 84 YQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILIIGGD 185
BLAST of mRNA_H-elongata_contig158385.3785.1 vs. uniprot
Match: A0A6H5K9R3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R3_9PHAE) HSP 1 Score: 106 bits (265), Expect = 2.910e-24 Identity = 54/103 (52.43%), Postives = 72/103 (69.90%), Query Frame = 0
Query: 6 WQLDYNTAFLNAKVEEEVYVKMAPGYEEFN--NDGIPMVMRLLKSLYGLRQSPRCWYGTVDEHVVEIGFRSLKSDPCVYIYSEGGAIYILTLYVDDVLLLGKD 106
WQ+D AFL ++++V+VK APG + + GI MV +L +SLYGL QSP WY T+DE +V IGFR +SDPCVYI+ G + ILTLYV+D+L+ GKD
Sbjct: 486 WQMDVAVAFLQPTIDKDVWVKPAPGQDAKDPATGGI-MVYKLERSLYGLAQSPVLWYDTIDEVLVVIGFRPTQSDPCVYIHGSGDTLVILTLYVNDILISGKD 587
BLAST of mRNA_H-elongata_contig158385.3785.1 vs. uniprot
Match: A0A6H5KTY2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY2_9PHAE) HSP 1 Score: 104 bits (260), Expect = 1.100e-23 Identity = 52/102 (50.98%), Postives = 70/102 (68.63%), Query Frame = 0
Query: 6 WQLDYNTAFLNAKVEEEVYVKMAPGYEEFNN-DGIPMVMRLLKSLYGLRQSPRCWYGTVDEHVVEIGFRSLKSDPCVYIYSEGGAIYILTLYVDDVLLLGKD 106
+QLD AFLNA + +VYV+ APG N+ G PMV +L +SLYGL QSP W T+DE + G++ +SDPCVY+Y+ G +I ILT+YVDD+L+ G D
Sbjct: 292 YQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNSIVILTVYVDDILITGGD 393
BLAST of mRNA_H-elongata_contig158385.3785.1 vs. uniprot
Match: A0A6H5JVC8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVC8_9PHAE) HSP 1 Score: 100 bits (248), Expect = 1.820e-23 Identity = 52/99 (52.53%), Postives = 67/99 (67.68%), Query Frame = 0
Query: 8 LDYNTAFLNAKVEEEVYVKMAPGYEEFNN-DGIPMVMRLLKSLYGLRQSPRCWYGTVDEHVVEIGFRSLKSDPCVYIYSEGGAIYILTLYVDDVLLLGK 105
+D TAFL + VEEEVYV+ A GYE + G+P+VM+L KSLYGL+QSPR + + + EIGF +L SDPCVY+Y G IL +YVDD L G+
Sbjct: 102 MDVVTAFLQSNVEEEVYVRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSPRNFGNAFAKGIKEIGFTALLSDPCVYVYGAGPTYAILCVYVDDCTLAGR 200
BLAST of mRNA_H-elongata_contig158385.3785.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT) HSP 1 Score: 104 bits (259), Expect = 1.830e-23 Identity = 48/104 (46.15%), Postives = 69/104 (66.35%), Query Frame = 0
Query: 3 LECWQLDYNTAFLNAKVEEEVYVKMAPGYEEFNNDGIPMVMRLLKSLYGLRQSPRCWYGTVDEHVVEIGFRSLKSDPCVYIYSEGGAIYILTLYVDDVLLLGKD 106
L+ Q+D TAFLN ++EEVY+K G+ E + + V RL +S+YGL+QSPRCW +D + +GF DPC+Y+ EGG I+I+ +YVDD+LL GK+
Sbjct: 87 LKLHQMDVTTAFLNGDLKEEVYMKQTEGFIEKGKEHL--VCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYVKEEGGEIFIIAVYVDDILLAGKN 188
BLAST of mRNA_H-elongata_contig158385.3785.1 vs. uniprot
Match: UPI001C955A94 (hypothetical protein n=1 Tax=Blastococcus endophyticus TaxID=673521 RepID=UPI001C955A94) HSP 1 Score: 100 bits (249), Expect = 2.080e-23 Identity = 55/124 (44.35%), Postives = 73/124 (58.87%), Query Frame = 0
Query: 2 DLECWQLDYNTAFLNAKVEEEVYVKMAPGYEEFNNDGIPMVMRLLKSLYGLRQSPRCWYGTVDEHVVEIGFRSLKSDPCVYIYSEGGAIYILTLYVDDVLLLG---------KDVVMYTFESDD 116
DLE Q+D TAFL+ +EEE+Y+K G+ + + V +L KSLYGL+QSPR WY D + +IGF +D CVY+ EG ILTLYVDD+LL+G KD++ FE D
Sbjct: 9 DLEIEQMDVKTAFLHGDLEEEIYMKQPEGFVARGKENL--VCKLEKSLYGLKQSPRMWYQKFDSYAQQIGFTRSHADHCVYVKREGELFVILTLYVDDMLLIGNSTKMIRTVKDLLAKQFEMKD 130
BLAST of mRNA_H-elongata_contig158385.3785.1 vs. uniprot
Match: A0A6H5KH19_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH19_9PHAE) HSP 1 Score: 103 bits (258), Expect = 2.370e-23 Identity = 52/102 (50.98%), Postives = 69/102 (67.65%), Query Frame = 0
Query: 6 WQLDYNTAFLNAKVEEEVYVKMAPGYEEFNN-DGIPMVMRLLKSLYGLRQSPRCWYGTVDEHVVEIGFRSLKSDPCVYIYSEGGAIYILTLYVDDVLLLGKD 106
+QLD AFLNA + +VYV+ APG N+ G PMV +L +SLYGL QSP W T+DE + G++ +SDPCVY+Y+ G I ILT+YVDD+L+ G D
Sbjct: 253 YQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPAVWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGD 354 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig158385.3785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig158385.3785.1 ID=prot_H-elongata_contig158385.3785.1|Name=mRNA_H-elongata_contig158385.3785.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=128bpback to top |