prot_H-elongata_contig15820.3777.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15820.3777.1
Unique Nameprot_H-elongata_contig15820.3777.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length256
Homology
BLAST of mRNA_H-elongata_contig15820.3777.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 374 bits (961), Expect = 2.290e-127
Identity = 188/254 (74.02%), Postives = 210/254 (82.68%), Query Frame = 0
Query:    3 SPTSVTGKWLLASEMFVLRGSVFYCRGTSIGGDCDELRIQSINSTDYNEVRGHGGSLYFEDTLVTSWDTPNKTPQEVYEDGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPGVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAVGIFLHRSSDSCEIYG 256
            SPTSVT KWLL SE++V  G++FYC G+  GGDCDELRIQS    D+ EVRGHGGS+YF  T+VTSWDTPNK PQE YE GRSF+NCVSE  + ETC+G+ KND GECRMDII+SEMGY+G+FD+ESYGLTWKVRGFC D SNP VF+TTNVYGDIKNS+IHHMYYGMYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX                 GG +AVGIFLHRSSD+ E+YG
Sbjct:   11 SPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG 264          
BLAST of mRNA_H-elongata_contig15820.3777.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 341 bits (874), Expect = 2.470e-114
Identity = 163/260 (62.69%), Postives = 187/260 (71.92%), Query Frame = 0
Query:    4 PTSVTGKWLLASEMFVLRGSVFYCRGTSIGGDCDELRIQSINSTDYNEVRGHGGSLYFEDTLVTSWDTPNKTPQEVYEDGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPGVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAVGIFLHRSSDSCEIY 255
            P+ +T  WLLA+E+++  G VFYC+GTS GGDC++LRIQS  S D++EVRGHGGSLYFEDT+VTSWDTPNK PQE YE GRSF+NCVSE  + + CEG  KN+ GECRMDII+SE+ YLG+FDSESYG+TWK        VRGFC D SNP VFD TNVYGD+  SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT                                GGA AVGIFLHRSSD   ++
Sbjct:   33 PSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVRD------------GGAAAVGIFLHRSSDDAAVF 280          
BLAST of mRNA_H-elongata_contig15820.3777.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 355 bits (912), Expect = 1.020e-113
Identity = 163/252 (64.68%), Postives = 189/252 (75.00%), Query Frame = 0
Query:    4 PTSVTGKWLLASEMFVLRGSVFYCRGTSIGGDCDELRIQSINSTDYNEVRGHGGSLYFEDTLVTSWDTPNKTPQEVYEDGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPGVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAVGIFLHRSSDSCEIY 255
            P+ +T  WLLA+E+++  G VFYC+GTS GGDC++LRIQS  S D++EVRGHGGSLYFEDT+VTSWDTPNK PQE YE+GRSF+NCVSE  + + CEG  KN+ GECRMDII+SE+ YLG+FDSESYG+TWKVRGFC D SNP VF+ TNVYGD+  SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA                              GGA A GIFLHRSSD   ++
Sbjct:  484 PSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVF 735          
BLAST of mRNA_H-elongata_contig15820.3777.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 337 bits (865), Expect = 1.060e-110
Identity = 160/253 (63.24%), Postives = 184/253 (72.73%), Query Frame = 0
Query:    3 SPTSVTGKWLLASEMFVLRGSVFYCRGTSIGGDCDELRIQSINSTDYNEVRGHGGSLYFEDTLVTSWDTPNKTPQEVYEDGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPGVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAVGIFLHRSSDSCEIY 255
            +P  ++ KWLL +E+ +  G+VFYCRG+SIGGDCDELRIQS   TD++EVR HGGS+YFE T+VTSWDTPNKTPQ  Y  GRSF+NCVSE  + E C GQ +N+ GECRMDII+SE+GYLG+FDSESYGLTWKVRGFC D SNP VFDTTNVYG++  SDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT                                GG  A GIFLHRSSD   ++
Sbjct:  120 NPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVYD------------GGPFAAGIFLHRSSDYAIVH 360          
BLAST of mRNA_H-elongata_contig15820.3777.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 332 bits (851), Expect = 2.420e-109
Identity = 162/263 (61.60%), Postives = 183/263 (69.58%), Query Frame = 0
Query:    3 SPTSVTGKWLLASEMFVLRGSVFYCRGTSIGGDCDELRIQSINSTDYNEVRGHGGSLYFEDTLVTSWDTPNKTPQEVYEDGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPGVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAVGIFLHRSSDSCEIYG 256
            +PTSVT KWLL +E++V  G++FYC G+  GGDCDELRIQS    D+ EVRGHGGS+YF  T+VTSWDTPNK PQE YE GRSF+NCVSE  + ETC+G  KND GECRMDII+SEMGY+G+FDSESYGLTWKVR         GFC D SNP VF+TTNVYGDIKNSDIHHMYYG YSYGHQGGVWTNN+MHDNHQY            +A                              GG DAVGIFLHRSSD+ E+YG
Sbjct:   56 APTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYG 306          
BLAST of mRNA_H-elongata_contig15820.3777.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 331 bits (849), Expect = 2.800e-109
Identity = 156/253 (61.66%), Postives = 182/253 (71.94%), Query Frame = 0
Query:    5 TSVTGKWLLASEMFVLRGSVFYCRGTSIGGDCDELRIQSINSTDYNEVRGHGGSLYFEDTLVTSWDTPNKTPQEVYEDGRSFINCVSEY-ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPGVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAVGIFLHRSSDSCEIYG 256
            T+ TGKWLL +++FV  G+  YCRG  +GG+C ELRI+S + +D+ E+RGHGG+LYFEDT+VTSWD   + PQE Y+DGRSFI CVSE    ++TC     N+ GECRMDIIDSEMGYLG+  SE+YG+TWKVRGFC+D SNP VFD  NVYGD+K SDIHHMYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA                              GGADA GIFLHRS D  E+YG
Sbjct:   47 TTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYG 296          
BLAST of mRNA_H-elongata_contig15820.3777.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 5.500e-83
Identity = 135/254 (53.15%), Postives = 157/254 (61.81%), Query Frame = 0
Query:    5 TSVTGKWLLASEMFVLRGSVFYCRGTSIGGDCDELRIQSINSTDYNEVRGHGGSLYFEDTLVTSWDTPNKTPQEVYEDGRSFINCVSEY--ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPGVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAVGIFLHRSSDSCEIYG 256
            TS TG WLL  E++V  G      G+  GGD DELR+ S N T  N +R HGGSL F  T V SWDT   +P E   DGRS+I+ +SE   + DETCEG  KN  GE RMDI  SE+GYLG++DSESYGLTWKVRGFC DKSNP VFD  NVYG++ +SDIHHM +G+Y+YGHQ G W  NKMHDN  YGFDPHDDSD+LTI                               G   + GIFLHRSSD   + G
Sbjct:   97 TSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFIN-LRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKG 349          
BLAST of mRNA_H-elongata_contig15820.3777.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 1.000e-81
Identity = 135/254 (53.15%), Postives = 157/254 (61.81%), Query Frame = 0
Query:    5 TSVTGKWLLASEMFVLRGSVFYCRGTSIGGDCDELRIQSINSTDYNEVRGHGGSLYFEDTLVTSWDTPNKTPQEVYEDGRSFINCVSEY--ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPGVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAVGIFLHRSSDSCEIYG 256
            TS TG WLL  E++V  G      G+  GGD DELR+ S N T  N +R HGGSL F  T V SWDT   +P E   DGRS+I+ +SE   + DETCEG  KN  GE RMDI  SE+GYLG++DSESYGLTWKVRGFC DKSNP VFD  NVYG++ +SDIHHM +G+Y+YGHQ G W  NKMHDN  YGFDPHDDSD+LTI                               G   + GIFLHRSSD   + G
Sbjct:   97 TSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFIN-LRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKG 349          
BLAST of mRNA_H-elongata_contig15820.3777.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 1.060e-79
Identity = 136/253 (53.75%), Postives = 159/253 (62.85%), Query Frame = 0
Query:    6 SVTGKWLLASEMFVLRGSVFYCRGTSIGGDCDELRIQSINSTDYNEVRGHGGSLYFEDTLVTSWDTPNKTPQEVYEDGRSFINCVSEYESD--ETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPGVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAVGIFLHRSSDSCEIYG 256
            S TG WLL  ++ V  GS+    G   GGD   LRIQS  S DY E+RGHGGSL F DT VTSWDT  K     Y+  RSFI CVSE  +D  +TC+G   N  GECRMDII SEMG +G+  +ESYG++WKVRG+C++  NP VF+ T V GDI +SDI+ MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD L IA                              GG  AVGIFLHRSSD CE++G
Sbjct:  439 SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWG 691          
BLAST of mRNA_H-elongata_contig15820.3777.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 7.710e-79
Identity = 132/251 (52.59%), Postives = 155/251 (61.75%), Query Frame = 0
Query:    8 TGKWLLASEMFVLRGSVFYCRGTSIGGDCDELRIQSINSTDYNEVRGHGGSLYFEDTLVTSWDTPNKTPQEVYEDGRSFINCVSEY--ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPGVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAVGIFLHRSSDSCEIYG 256
            TG WLL  E++V  G      GT  GGD DELR+ S + T Y  +R HGGSL F  T V SWDT   +P E   DGRS+I+ VSE   + DETCEG  KN  GE RMDI +SE+GYLG+ DSESYGLTWKVRGFC DKSNP +FD  NVYG++ +SDIHH+ +G+Y+YGHQ G W  NKMHDN  YGFDPHDDSD+LTI                               G   + GIFLHRSSD   + G
Sbjct:  104 TGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKG 353          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15820.3777.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIU4_ECTSI2.290e-12774.02Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KWQ2_9PHAE2.470e-11462.69MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LC73_ECTSI1.020e-11364.68Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D8LRM4_ECTSI1.060e-11063.24Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
A0A6H5JGU8_9PHAE2.420e-10961.60MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FRR8_ECTSI2.800e-10961.66Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FXE5_ECTSI5.500e-8353.15Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI1.000e-8153.15Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
A0A6H5JNF5_9PHAE1.060e-7953.75MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FXE4_ECTSI7.710e-7952.59Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 199..221
e-value: 5.9
score: 15.9
coord: 153..174
e-value: 2500.0
score: 4.3
coord: 175..197
e-value: 7400.0
score: 1.0
coord: 223..247
e-value: 550.0
score: 9.1
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 146..255
e-value: 2.5E-10
score: 40.4
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 3..256
e-value: 1.7E-69
score: 236.6
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 141..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15820contigH-elongata_contig15820:3159..4122 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15820.3777.1mRNA_H-elongata_contig15820.3777.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15820 3159..4146 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15820.3777.1 ID=prot_H-elongata_contig15820.3777.1|Name=mRNA_H-elongata_contig15820.3777.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=256bp
MYSPTSVTGKWLLASEMFVLRGSVFYCRGTSIGGDCDELRIQSINSTDYN
EVRGHGGSLYFEDTLVTSWDTPNKTPQEVYEDGRSFINCVSEYESDETCE
GQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPGVFD
TTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSD
YLTIANNEVYNNVNHGIIASKRCNNLKIYENEVYNGGADAVGIFLHRSSD
SCEIYG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR039448Beta_helix
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence