prot_H-elongata_contig158083.3771.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig158083.3771.1
Unique Nameprot_H-elongata_contig158083.3771.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length124
Homology
BLAST of mRNA_H-elongata_contig158083.3771.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 4.670e-25
Identity = 63/129 (48.84%), Postives = 79/129 (61.24%), Query Frame = 0
Query:    4 KKGQGGVGLAIRT----SITRAARPPEFISDRLLNVTLELRGRAKAITFLVAYAPTETQNASN------KDAFWTSLDRAVEEVPRHEQLFVLMDTNAHTGMREKGQVGSKDIKILGAYGRDTLNDNGE 122
            K+G  GVG+AI+     S+    R  E IS RL+ V L++ GR   +TFLV YAPTET   +       KD+FWT+LD A+ EV   + L VLMD NA TG R KG     D KI+GAYGRD +N+NGE
Sbjct:  244 KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKGCC---DAKIMGAYGRDIMNNNGE 368          
BLAST of mRNA_H-elongata_contig158083.3771.1 vs. uniprot
Match: A0A6H5KP87_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP87_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 5.790e-25
Identity = 60/129 (46.51%), Postives = 78/129 (60.47%), Query Frame = 0
Query:    4 KKGQGGVGLAIRT----SITRAARPPEFISDRLLNVTLELRGRAKAITFLVAYAPTETQ------NASNKDAFWTSLDRAVEEVPRHEQLFVLMDTNAHTGMREKGQVGSKDIKILGAYGRDTLNDNGE 122
            K+G  GVG+AI+     S+    R  E IS RL+ V L++ GR   +TF+V YAPTET       + + KD+FWT+LD  + EV   + L VLMD NA TG R  G     D KI+GAYGRD +N+NGE
Sbjct:   47 KRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCC---DAKIMGAYGRDIMNNNGE 171          
BLAST of mRNA_H-elongata_contig158083.3771.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 2.000e-24
Identity = 61/129 (47.29%), Postives = 79/129 (61.24%), Query Frame = 0
Query:    4 KKGQGGVGLAIRT----SITRAARPPEFISDRLLNVTLELRGRAKAITFLVAYAPTETQ------NASNKDAFWTSLDRAVEEVPRHEQLFVLMDTNAHTGMREKGQVGSKDIKILGAYGRDTLNDNGE 122
            K+G  GVG+AI+     S+    R  E IS RL+ V L++ GR   +TF+V YAPTET       + + KD+FWT+LD A+ EV   + L VLMD NA TG R  G     D K+LGAYGRD +N+NGE
Sbjct:   47 KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRGGCC---DAKVLGAYGRDIMNNNGE 171          
BLAST of mRNA_H-elongata_contig158083.3771.1 vs. uniprot
Match: A0A6H5KQ63_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ63_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 3.980e-24
Identity = 62/130 (47.69%), Postives = 79/130 (60.77%), Query Frame = 0
Query:    3 GKKGQGGVGLAIRT----SITRAARPPEFISDRLLNVTLELRGRAKAITFLVAYAPTETQ------NASNKDAFWTSLDRAVEEVPRHEQLFVLMDTNAHTGMREKGQVGSKDIKILGAYGRDTLNDNGE 122
            GK G  GVG+AI+     S+    R  E IS RL+ V L++ GR   +TF+V YAPTET       + + KD+FWT+LD A+ EV   + L VLMD NA TG R  G     D KI+GAYGRD +N+NGE
Sbjct:   46 GKWGVHGVGIAIKEAMWQSVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCC---DAKIMGAYGRDIMNNNGE 171          
BLAST of mRNA_H-elongata_contig158083.3771.1 vs. uniprot
Match: A0A6H5JII6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII6_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 5.550e-24
Identity = 61/129 (47.29%), Postives = 79/129 (61.24%), Query Frame = 0
Query:    4 KKGQGGVGLAIRT----SITRAARPPEFISDRLLNVTLELRGRAKAITFLVAYAPTETQ------NASNKDAFWTSLDRAVEEVPRHEQLFVLMDTNAHTGMREKGQVGSKDIKILGAYGRDTLNDNGE 122
            K+G  GVG+AI+     S+    R  E IS RL+ V L++ GR   +TF+V YAPTET       + + KD+FWT+LD A+ EV   + L VLMD NA TG R  G     D KI+GAYGRD +N+NGE
Sbjct:   47 KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCC---DAKIMGAYGRDIMNNNGE 171          
BLAST of mRNA_H-elongata_contig158083.3771.1 vs. uniprot
Match: A0A6H5JMM5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMM5_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 5.990e-24
Identity = 60/129 (46.51%), Postives = 79/129 (61.24%), Query Frame = 0
Query:    4 KKGQGGVGLAIRT----SITRAARPPEFISDRLLNVTLELRGRAKAITFLVAYAPTETQ------NASNKDAFWTSLDRAVEEVPRHEQLFVLMDTNAHTGMREKGQVGSKDIKILGAYGRDTLNDNGE 122
            K+G  GVG AI+     S+    R  E IS RL+ V L++ GR   +TF+V YAPTET       + + KD+FWT+LD A+ EV   + L VLMD NA TG R   +VG  D K++GAYGRD + +NGE
Sbjct:   47 KRGVHGVGRAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRR---RVGCCDGKMMGAYGRDIMTNNGE 171          
BLAST of mRNA_H-elongata_contig158083.3771.1 vs. uniprot
Match: A0A6H5KCV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV1_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 8.040e-24
Identity = 61/129 (47.29%), Postives = 78/129 (60.47%), Query Frame = 0
Query:    4 KKGQGGVGLAIRT----SITRAARPPEFISDRLLNVTLELRGRAKAITFLVAYAPTETQNASN------KDAFWTSLDRAVEEVPRHEQLFVLMDTNAHTGMREKGQVGSKDIKILGAYGRDTLNDNGE 122
            K+G  GVG+AI+     S+    R  E IS RL+ V L++ GR   +TF+V YAPTET   +       KD+FWT+LD A+ EV   + L VLMD NA TG R  G     D KI+GAYGRD +N+NGE
Sbjct:   79 KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDDNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCC---DAKIMGAYGRDIMNNNGE 203          
BLAST of mRNA_H-elongata_contig158083.3771.1 vs. uniprot
Match: A0A6H5JVN7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN7_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 8.710e-24
Identity = 60/129 (46.51%), Postives = 80/129 (62.02%), Query Frame = 0
Query:    4 KKGQGGVGLAIRTS----ITRAARPPEFISDRLLNVTLELRGRAKAITFLVAYAPTETQ------NASNKDAFWTSLDRAVEEVPRHEQLFVLMDTNAHTGMREKGQVGSKDIKILGAYGRDTLNDNGE 122
            K+G+ GVG+AI+ +    +    R  E IS RL+ V L++ GR   +TF+V YAPTET       + + KD+FWT+LD A+ EV   + L VLMD NA TG R  G     D KI+GAYGRD +N+NGE
Sbjct:  224 KRGEQGVGIAIKEAMWETVGEEGRKVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRITAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCC---DAKIMGAYGRDIMNNNGE 348          
BLAST of mRNA_H-elongata_contig158083.3771.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.130e-23
Identity = 61/129 (47.29%), Postives = 79/129 (61.24%), Query Frame = 0
Query:    4 KKGQGGVGLAIRT----SITRAARPPEFISDRLLNVTLELRGRAKAITFLVAYAPTETQ------NASNKDAFWTSLDRAVEEVPRHEQLFVLMDTNAHTGMREKGQVGSKDIKILGAYGRDTLNDNGE 122
            K+G  GVG+AI+     S+    R  E IS RL+ V L++ GR   +TF+V YAPTET       + + KD+FWT+LD A+ EV   + L VLMD NA TG R  G     D KI+GAYGRD +N+NGE
Sbjct:  155 KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCC---DAKIMGAYGRDIMNNNGE 279          
BLAST of mRNA_H-elongata_contig158083.3771.1 vs. uniprot
Match: A0A6H5L7A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A7_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.190e-23
Identity = 61/129 (47.29%), Postives = 79/129 (61.24%), Query Frame = 0
Query:    4 KKGQGGVGLAIRT----SITRAARPPEFISDRLLNVTLELRGRAKAITFLVAYAPTETQ------NASNKDAFWTSLDRAVEEVPRHEQLFVLMDTNAHTGMREKGQVGSKDIKILGAYGRDTLNDNGE 122
            K+G  GVG+AI+     S+    R  E IS RL+ V L++ GR   +TF+V YAPTET       + + KD+FWT+LD A+ EV   + L VLMD NA TG R  G     D KI+GAYGRD +N+NGE
Sbjct:   47 KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCC---DAKIMGAYGRDIMNNNGE 171          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig158083.3771.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3Q1_9PHAE4.670e-2548.84Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KP87_9PHAE5.790e-2546.51Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KBZ6_9PHAE2.000e-2447.29Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KQ63_9PHAE3.980e-2447.69Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JII6_9PHAE5.550e-2447.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMM5_9PHAE5.990e-2446.51Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KCV1_9PHAE8.040e-2447.29Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JVN7_9PHAE8.710e-2446.51Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JMB4_9PHAE1.130e-2347.29Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L7A7_9PHAE1.190e-2347.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 1..123
e-value: 1.2E-9
score: 39.9
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 2..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig158083contigH-elongata_contig158083:1098..1469 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig158083.3771.1mRNA_H-elongata_contig158083.3771.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig158083 1098..1469 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig158083.3771.1 ID=prot_H-elongata_contig158083.3771.1|Name=mRNA_H-elongata_contig158083.3771.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=124bp
NGGKKGQGGVGLAIRTSITRAARPPEFISDRLLNVTLELRGRAKAITFLV
AYAPTETQNASNKDAFWTSLDRAVEEVPRHEQLFVLMDTNAHTGMREKGQ
VGSKDIKILGAYGRDTLNDNGEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf