prot_H-elongata_contig15794.3766.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15794.3766.1
Unique Nameprot_H-elongata_contig15794.3766.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length62
Homology
BLAST of mRNA_H-elongata_contig15794.3766.1 vs. uniprot
Match: D8LCE0_ECTSI (Glutamate synthase (NADH/NADPH-dependent), C-terminal part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCE0_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 1.530e-20
Identity = 46/62 (74.19%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    1 MGMVALESVETPEDMELLRGFVEEHQKHTGSTVAQALLDDFGTAVTHFVKVYPNDYKRVLAE 62
            MGMVALE V+TPEDME LRGF++ H  HT ST A+ LLDDFGT+VT FVKV P+DYKRVLAE
Sbjct: 1200 MGMVALEKVDTPEDMEELRGFIQAHLDHTKSTTAKKLLDDFGTSVTKFVKVMPHDYKRVLAE 1261          
BLAST of mRNA_H-elongata_contig15794.3766.1 vs. uniprot
Match: A0A7Y5W280_9CHLR (Glutamate synthase large subunit n=2 Tax=Bacteria TaxID=2 RepID=A0A7Y5W280_9CHLR)

HSP 1 Score: 75.5 bits (184), Expect = 1.890e-14
Identity = 35/60 (58.33%), Postives = 48/60 (80.00%), Query Frame = 0
Query:    3 MVALESVETPEDMELLRGFVEEHQKHTGSTVAQALLDDFGTAVTHFVKVYPNDYKRVLAE 62
            MV+LE +  PED+EL+ G +E H+++TGSTVA+A+L+D+ T    FVKV PNDY+RVLAE
Sbjct:  987 MVSLEPLADPEDLELVHGLIERHREYTGSTVARAILEDWQTTSARFVKVMPNDYRRVLAE 1046          
BLAST of mRNA_H-elongata_contig15794.3766.1 vs. uniprot
Match: A0A6H5KK65_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK65_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 3.530e-14
Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    1 MGMVALESVETPEDMELLRGFVEEHQKHTGSTVAQALLDDFGTAVTHFVK 50
            MGMV LE V+TPEDME LRGF++ H  HTGST A+ LLDDFGT+VT FVK
Sbjct:  363 MGMVGLEKVDTPEDMEELRGFIQAHLDHTGSTTAKKLLDDFGTSVTKFVK 412          
BLAST of mRNA_H-elongata_contig15794.3766.1 vs. uniprot
Match: A0A7S3KXA2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KXA2_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.500e-12
Identity = 34/62 (54.84%), Postives = 48/62 (77.42%), Query Frame = 0
Query:    1 MGMVALESVETPEDMELLRGFVEEHQKHTGSTVAQALLDDFGTAVTHFVKVYPNDYKRVLAE 62
            MG+V LESV+TPE+ E L G+++EH + TGS+V Q +L+++ + V  FVKV P+DYKRVL E
Sbjct: 1518 MGLVGLESVDTPEESEELYGYIKEHVEATGSSVGQEMLENWDSRVGSFVKVMPHDYKRVLEE 1579          
BLAST of mRNA_H-elongata_contig15794.3766.1 vs. uniprot
Match: A0A7S0NWY0_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NWY0_9EUKA)

HSP 1 Score: 65.9 bits (159), Expect = 3.700e-12
Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 MGMVALESVETPEDMELLRGFVEEHQKHTGSTVAQALLDDFGTAVTHFVKVYPNDYKRVLAE 62
            M MVALE V   E++E L+G+++EH   TGS VA  +L+ +   ++HFVKV+P+DYKRVL E
Sbjct:   64 MEMVALEVVIDEEEVETLKGYLQEHADRTGSAVAVGMLEQWPAPLSHFVKVFPHDYKRVLIE 125          
BLAST of mRNA_H-elongata_contig15794.3766.1 vs. uniprot
Match: A0A7V5XC86_9GAMM (Glutamate synthase subunit alpha n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7V5XC86_9GAMM)

HSP 1 Score: 68.2 bits (165), Expect = 6.990e-12
Identity = 32/61 (52.46%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    2 GMVALESVETPEDMELLRGFVEEHQKHTGSTVAQALLDDFGTAVTHFVKVYPNDYKRVLAE 62
            GMV L+ V+  +D+  LR  +E+H +HTGSTVA+ +LD++   ++ FVKV P DYKRVLAE
Sbjct:  401 GMVDLDPVDDDDDISELRDLIEQHHRHTGSTVAERILDEWPEILSQFVKVMPTDYKRVLAE 461          
BLAST of mRNA_H-elongata_contig15794.3766.1 vs. uniprot
Match: A0A6U4IAI1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4IAI1_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.780e-11
Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    1 MGMVALESVETPEDMELLRGFVEEHQKHTGSTVAQALLDDFGTAVTHFVKVYPNDYKRVLAE 62
            MGMV LE VET ++ ELLR ++EEH++ TGS  A  LL+++   +  FVKV P DYKRVL E
Sbjct:  402 MGMVELERVETADEAELLRSYIEEHKERTGSERASELLENWADELPCFVKVMPTDYKRVLQE 463          
BLAST of mRNA_H-elongata_contig15794.3766.1 vs. uniprot
Match: B7GAZ5_PHATC (Ferredoxin-dependent glutamate synthase, fusion of large and small subunits n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAZ5_PHATC)

HSP 1 Score: 67.0 bits (162), Expect = 1.820e-11
Identity = 30/62 (48.39%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    1 MGMVALESVETPEDMELLRGFVEEHQKHTGSTVAQALLDDFGTAVTHFVKVYPNDYKRVLAE 62
            MG+V LE+++TPE+ E +  +++EH + TGS+  Q +LD++   V  FVKV+P+DYKRVL E
Sbjct: 1521 MGLVGLETIDTPEESEEVHSYIKEHVEMTGSSTGQKMLDNWENEVGRFVKVFPHDYKRVLME 1582          
BLAST of mRNA_H-elongata_contig15794.3766.1 vs. uniprot
Match: UPI00198A060B (Glutamate synthase subunit alpha n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=UPI00198A060B)

HSP 1 Score: 65.9 bits (159), Expect = 4.620e-11
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    1 MGMVALESVETPEDMELLRGFVEEHQKHTGSTVAQALLDDFGTAVTHFVKVYPNDYKRVLAE 62
            +G V LE+VE P+D+  L   +E+H KHT STVA  +L  +  A+  FVKV P DYKRVLAE
Sbjct:  743 LGTVELEAVEAPQDIADLLNLIEQHFKHTKSTVADRILQSWPEAIAQFVKVMPTDYKRVLAE 804          
BLAST of mRNA_H-elongata_contig15794.3766.1 vs. uniprot
Match: A0A1Y2K8X1_9PROT (Putative glutamate synthase (NADH) large subunit n=1 Tax=Magnetofaba australis IT-1 TaxID=1434232 RepID=A0A1Y2K8X1_9PROT)

HSP 1 Score: 65.9 bits (159), Expect = 4.650e-11
Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    3 MVALESVETPEDMELLRGFVEEHQKHTGSTVAQALLDDFGTAVTHFVKVYPNDYKRVLAE 62
            MV LESVE+ ED++ LR  +E H KHT STVA  +LDD+ + +  FVKV P +YKRVL E
Sbjct: 1444 MVELESVESDEDIQTLRRLIENHAKHTDSTVAARVLDDWKSMLGKFVKVMPAEYKRVLLE 1503          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15794.3766.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCE0_ECTSI1.530e-2074.19Glutamate synthase (NADH/NADPH-dependent), C-termi... [more]
A0A7Y5W280_9CHLR1.890e-1458.33Glutamate synthase large subunit n=2 Tax=Bacteria ... [more]
A0A6H5KK65_9PHAE3.530e-1472.00Reverse transcriptase domain-containing protein n=... [more]
A0A7S3KXA2_9STRA1.500e-1254.84Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S0NWY0_9EUKA3.700e-1251.61Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7V5XC86_9GAMM6.990e-1252.46Glutamate synthase subunit alpha n=1 Tax=Chromatia... [more]
A0A6U4IAI1_9STRA1.780e-1154.84Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
B7GAZ5_PHATC1.820e-1148.39Ferredoxin-dependent glutamate synthase, fusion of... [more]
UPI00198A060B4.620e-1153.23Glutamate synthase subunit alpha n=1 Tax=Pirellula... [more]
A0A1Y2K8X1_9PROT4.650e-1156.67Putative glutamate synthase (NADH) large subunit n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036485Glutamate synthase, alpha subunit, C-terminal domain superfamilyGENE3D2.160.20.60coord: 1..62
e-value: 8.9E-14
score: 52.9
IPR036485Glutamate synthase, alpha subunit, C-terminal domain superfamilySUPERFAMILY69336Alpha subunit of glutamate synthase, C-terminal domaincoord: 2..60
NoneNo IPR availablePANTHERPTHR11938FAD NADPH DEHYDROGENASE/OXIDOREDUCTASEcoord: 2..62
NoneNo IPR availablePANTHERPTHR11938:SF133GLUTAMATE SYNTHASE [NADH]coord: 2..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15794contigH-elongata_contig15794:6701..7263 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15794.3766.1mRNA_H-elongata_contig15794.3766.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15794 6701..7290 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15794.3766.1 ID=prot_H-elongata_contig15794.3766.1|Name=mRNA_H-elongata_contig15794.3766.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=62bp
MGMVALESVETPEDMELLRGFVEEHQKHTGSTVAQALLDDFGTAVTHFVK
VYPNDYKRVLAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036485Glu_synth_asu_C_sf