prot_H-elongata_contig157931.3765.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig157931.3765.1
Unique Name	prot_H-elongata_contig157931.3765.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	111

Homology

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BLAST of mRNA_H-elongata_contig157931.3765.1 vs. uniprot
Match: D7FWC7_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC7_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 1.820e-54
Identity = 92/108 (85.19%), Postives = 103/108 (95.37%), Query Frame = 0

Query:    4 QVAQVPDRHLRKKLKVIFRGEEGVDEGGVTKEFFQLLTVQLFDQSFGMFVPAGEGGHDLWFNKDCVWANEEYGLVGLLVGLAVYAGVILDVPLPLVVFRKVLGQPLSL 111
            +V+++PD  LRK+LKV+FRGE+GVDEGGVTKEFFQLLTVQLFDQSFGMFVPAGEGG  LWFNKDCVWA+EEYGLVGLLVGLAVY+GVILDVPLPLVVF+KVLG+ LSL
Sbjct:  875 KVSRLPDADLRKRLKVVFRGEDGVDEGGVTKEFFQLLTVQLFDQSFGMFVPAGEGGRVLWFNKDCVWADEEYGLVGLLVGLAVYSGVILDVPLPLVVFKKVLGEQLSL 982

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BLAST of mRNA_H-elongata_contig157931.3765.1 vs. uniprot
Match: A0A6H5K2Y9_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Y9_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 1.190e-53
Identity = 91/107 (85.05%), Postives = 101/107 (94.39%), Query Frame = 0

Query:    5 VAQVPDRHLRKKLKVIFRGEEGVDEGGVTKEFFQLLTVQLFDQSFGMFVPAGEGGHDLWFNKDCVWANEEYGLVGLLVGLAVYAGVILDVPLPLVVFRKVLGQPLSL 111
            V+++PD  LRKKLKV+FRGE+GVDEGGV KEFFQLLTVQLFDQSFGMFVPAGEGG  LWFNKDCVWA+EEYGLVGLLVGLAVY+GVILDVPLPLVVF+K+LG+ LSL
Sbjct: 1387 VSRLPDADLRKKLKVVFRGEDGVDEGGVAKEFFQLLTVQLFDQSFGMFVPAGEGGRVLWFNKDCVWADEEYGLVGLLVGLAVYSGVILDVPLPLVVFKKLLGEQLSL 1493

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BLAST of mRNA_H-elongata_contig157931.3765.1 vs. uniprot
Match: A0A7S2R944_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R944_9STRA)

HSP 1 Score: 125 bits (315), Expect = 2.520e-31
Identity = 60/102 (58.82%), Postives = 76/102 (74.51%), Query Frame = 0

Query:    4 QVAQVPDRHLRKKLKVIFRGEEGVDEGGVTKEFFQLLTVQLFDQSFGMFVPAGEGGHDLWFNKDCVWANEEYGLVGLLVGLAVYAGVILDVPLPLVVFRKVL 105
            Q+  VPD  LRK+LKV F GE+G+DEGGV KEFFQLL  +LF + +GMF   G     LWFN+ C W++ EY LVG+L+GLA+Y GVILDV  PLVV++K+L
Sbjct:  597 QLVSVPDTELRKELKVAFEGEDGIDEGGVRKEFFQLLIERLFSEQYGMFTRVGGS---LWFNQGCTWSDGEYSLVGMLIGLALYNGVILDVHFPLVVYKKLL 695

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BLAST of mRNA_H-elongata_contig157931.3765.1 vs. uniprot
Match: A0A7S2R9E4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9E4_9STRA)

HSP 1 Score: 125 bits (315), Expect = 2.760e-31
Identity = 60/102 (58.82%), Postives = 76/102 (74.51%), Query Frame = 0

Query:    4 QVAQVPDRHLRKKLKVIFRGEEGVDEGGVTKEFFQLLTVQLFDQSFGMFVPAGEGGHDLWFNKDCVWANEEYGLVGLLVGLAVYAGVILDVPLPLVVFRKVL 105
            Q+  VPD  LRK+LKV F GE+G+DEGGV KEFFQLL  +LF + +GMF   G     LWFN+ C W++ EY LVG+L+GLA+Y GVILDV  PLVV++K+L
Sbjct:  597 QLVSVPDTELRKELKVAFEGEDGIDEGGVRKEFFQLLIERLFSEQYGMFTRVGGS---LWFNQGCTWSDGEYSLVGMLIGLALYNGVILDVHFPLVVYKKLL 695

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BLAST of mRNA_H-elongata_contig157931.3765.1 vs. uniprot
Match: D7FSE4_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSE4_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 1.330e-30
Identity = 56/73 (76.71%), Postives = 63/73 (86.30%), Query Frame = 0

Query:   39 LLTVQLFDQSFGMFVPAGEGGHDLWFNKDCVWANEEYGLVGLLVGLAVYAGVILDVPLPLVVFRKVLGQPLSL 111
            L   QLFDQS GMFVPAGE G  LWFNKDCV A+EEYGLVGLLVGLAVY+GVILDVPLPL+ F+++LG+ LSL
Sbjct:    6 LSPTQLFDQSSGMFVPAGEKGRVLWFNKDCVRADEEYGLVGLLVGLAVYSGVILDVPLPLMAFKQILGEQLSL 78

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BLAST of mRNA_H-elongata_contig157931.3765.1 vs. uniprot
Match: A0A7S4QMC4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QMC4_9STRA)

HSP 1 Score: 118 bits (295), Expect = 3.530e-29
Identity = 59/100 (59.00%), Postives = 74/100 (74.00%), Query Frame = 0

Query:   13 LRKKLKVIFRGEEGVDEGGVTKEFFQLLTVQLFDQSFGMFVPAGEGGHDL-WFNKDCVWANEEYGLVGLLVGLAVYAGVILDVPLPLVVFRKVLGQPLSL 111
            LRK+LKV+F+GE+GVD GGVTKEFFQLL VQLFD + GM+     G   + WFN DC W  + Y LVG+LVGLA+Y GV+LDV  P  V+RK++  PL+L
Sbjct:  120 LRKQLKVVFKGEDGVDAGGVTKEFFQLLAVQLFDINTGMWSTRVGGDEQVTWFNSDCSWNEDGYYLVGILVGLALYNGVLLDVHFPSAVYRKLMALPLAL 219

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BLAST of mRNA_H-elongata_contig157931.3765.1 vs. uniprot
Match: A0A7R9YGS3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YGS3_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.890e-28
Identity = 58/108 (53.70%), Postives = 77/108 (71.30%), Query Frame = 0

Query:    4 QVAQVPDRHLRKKLKVIFRGEEGVDEGGVTKEFFQLLTVQLFDQSFGMFVPAGEGGHDLWFNKDCVWANEEYGLVGLLVGLAVYAGVILDVPLPLVVFRKVLGQPLSL 111
            Q+A VP+  L+K+LKV F GE+GVDEGGV KEF+QL+T Q+FD  FGMF         +WFN+ C W  + Y ++G LV LA+Y GVILD+  P V+++K+LG PLSL
Sbjct:  899 QLAAVPETDLQKELKVRFIGEDGVDEGGVRKEFYQLITEQIFDIQFGMFSRM-MNDRIVWFNQACTWEQDNYKVIGKLVALAIYNGVILDLSFPNVLYKKLLGHPLSL 1005

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BLAST of mRNA_H-elongata_contig157931.3765.1 vs. uniprot
Match: A0A7S4ASY0_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ASY0_9STRA)

HSP 1 Score: 117 bits (292), Expect = 3.520e-28
Identity = 60/107 (56.07%), Postives = 74/107 (69.16%), Query Frame = 0

Query:    5 VAQVPDRHLRKKLKVIFRGEEGVDEGGVTKEFFQLLTVQLFDQSFGMFVPAGEGGHDLWFNKDCVWANEEYGLVGLLVGLAVYAGVILDVPLPLVVFRKVLGQPLSL 111
            VA      LRK LKV+F+GE+G+D GGVTKEFFQLL  +LFD + GM+  +    ++ WFN DC W  E Y LVG+L GLAVY  VILDV  P V++RK+LG PL L
Sbjct:  706 VASASTGELRKSLKVVFKGEDGIDAGGVTKEFFQLLCEKLFDVNTGMWTISEY--NETWFNSDCTWNGEGYYLVGVLCGLAVYNSVILDVHFPRVIYRKLLGIPLGL 810

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BLAST of mRNA_H-elongata_contig157931.3765.1 vs. uniprot
Match: A0A7S2XN65_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XN65_9STRA)

HSP 1 Score: 115 bits (289), Expect = 9.020e-28
Identity = 58/99 (58.59%), Postives = 71/99 (71.72%), Query Frame = 0

Query:   13 LRKKLKVIFRGEEGVDEGGVTKEFFQLLTVQLFDQSFGMFVPAGEGGHDLWFNKDCVWANEEYGLVGLLVGLAVYAGVILDVPLPLVVFRKVLGQPLSL 111
            LRKKL+VIF+ EEGVD GGVT+EFFQLL+  LFD S  ++     G    WFN DC W N+ Y LVG+LVGLA+Y  V+LDV  P+ V+RK+LG PL L
Sbjct:  994 LRKKLRVIFKDEEGVDAGGVTREFFQLLSQDLFDVSSSLWTTQ-YGDQITWFNSDCTWDNDGYELVGILVGLALYNSVLLDVHFPMAVYRKLLGLPLGL 1091

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BLAST of mRNA_H-elongata_contig157931.3765.1 vs. uniprot
Match: A0A7S1U6E2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U6E2_9STRA)

HSP 1 Score: 114 bits (286), Expect = 2.290e-27
Identity = 61/110 (55.45%), Postives = 75/110 (68.18%), Query Frame = 0

Query:    4 QVAQVPDRHLRKKLKVIFRGEEGVDEGGVTKEFFQLLTVQLFDQSFGMFVPAGEGGHDLWFNKDCVW--ANEEYGLVGLLVGLAVYAGVILDVPLPLVVFRKVLGQPLSL 111
            Q+   PD  LRK+LKV F GEEGVD+GGV KEFFQL+T QLF   +GMF     G   +WFN DC W  A   + +VG L+ LAVY GVILD+  P V+++K+LGQPL L
Sbjct:  894 QLGGAPDGDLRKELKVRFAGEEGVDQGGVRKEFFQLITEQLFGAEYGMF-SRRLGDRIVWFNPDCTWEEAAGNFRIVGKLLALAVYNGVILDLNFPSVLYKKLLGQPLGL 1002

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig157931.3765.1 vs. uniprot

BLAST of mRNA_H-elongata_contig157931.3765.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWC7_ECTSI	1.820e-54	85.19	HECT domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A6H5K2Y9_9PHAE	1.190e-53	85.05	HECT domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A7S2R944_9STRA	2.520e-31	58.82	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
A0A7S2R9E4_9STRA	2.760e-31	58.82	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
D7FSE4_ECTSI	1.330e-30	76.71	HECT domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A7S4QMC4_9STRA	3.530e-29	59.00	Hypothetical protein n=2 Tax=Ditylum brightwellii ...	[more]
A0A7R9YGS3_9STRA	1.890e-28	53.70	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]
A0A7S4ASY0_9STRA	3.520e-28	56.07	Hypothetical protein n=2 Tax=Pseudo-nitzschia aust...	[more]
A0A7S2XN65_9STRA	9.020e-28	58.59	Hypothetical protein (Fragment) n=1 Tax=Attheya se...	[more]
A0A7S1U6E2_9STRA	2.290e-27	55.45	Hypothetical protein n=2 Tax=Phaeomonas parva TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000569	HECT domain	PFAM	PF00632	HECT	coord: 39..110 e-value: 7.5E-7 score: 28.9
IPR000569	HECT domain	PROSITE	PS50237	HECT	coord: 9..111 score: 25.628
None	No IPR available	GENE3D	3.90.1750.10		coord: 2..110 e-value: 2.2E-32 score: 113.7
None	No IPR available	PANTHER	PTHR45622:SF13	LD13353P	coord: 4..107
None	No IPR available	PANTHER	PTHR45622	FAMILY NOT NAMED	coord: 4..107
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 102..111
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 75..101
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..74
None	No IPR available	TMHMM	TMhelix		coord: 75..97
IPR035983	HECT, E3 ligase catalytic domain	SUPERFAMILY	56204	Hect, E3 ligase catalytic domain	coord: 5..111

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig157931	contig	H-elongata_contig157931:751..1487 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig157931.3765.1	mRNA_H-elongata_contig157931.3765.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig157931 751..1487 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig157931.3765.1 ID=prot_H-elongata_contig157931.3765.1|Name=mRNA_H-elongata_contig157931.3765.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=111bp
TRFQVAQVPDRHLRKKLKVIFRGEEGVDEGGVTKEFFQLLTVQLFDQSFG
MFVPAGEGGHDLWFNKDCVWANEEYGLVGLLVGLAVYAGVILDVPLPLVV
FRKVLGQPLSL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000569	HECT_dom
IPR035983	Hect_E3_ubiquitin_ligase