prot_H-elongata_contig157889.3761.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig157889.3761.1
Unique Nameprot_H-elongata_contig157889.3761.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length45
Homology
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BLAST of mRNA_H-elongata_contig157889.3761.1 vs. uniprot
Match: A0A6H5KBU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU0_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 1.560e-8
Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 0 
Query:   14 VEATTCPTLLIHGLRDTVVPHTHSLELYRAS 44
            V  TTCPTL++HGL+D VVPHTHSLELYRAS
Sbjct:  205 VAETTCPTLVLHGLKDQVVPHTHSLELYRAS 235
[Close]
BLAST of mRNA_H-elongata_contig157889.3761.1 vs. uniprot
Match: D8LMJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ7_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 2.780e-8
Identity = 24/31 (77.42%), Postives = 28/31 (90.32%), Query Frame = 0 
Query:   14 VEATTCPTLLIHGLRDTVVPHTHSLELYRAS 44
            V  TTCPTL++HGL+D VVPHTHSL+LYRAS
Sbjct:  205 VAETTCPTLVLHGLKDQVVPHTHSLDLYRAS 235
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig157889.3761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KBU0_9PHAE1.560e-880.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMJ7_ECTSI2.780e-877.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820coord: 1..45
e-value: 1.9E-7
score: 32.7
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 14..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig157889contigH-elongata_contig157889:1119..1253 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig157889.3761.1mRNA_H-elongata_contig157889.3761.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig157889 1119..1253 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig157889.3761.1 ID=prot_H-elongata_contig157889.3761.1|Name=mRNA_H-elongata_contig157889.3761.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=45bp
FGAAVRDACGQVEVEATTCPTLLIHGLRDTVVPHTHSLELYRASP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase