prot_H-elongata_contig157884.3760.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig157884.3760.1
Unique Nameprot_H-elongata_contig157884.3760.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length48
Homology
BLAST of mRNA_H-elongata_contig157884.3760.1 vs. uniprot
Match: D8LSL3_ECTSI (Phosphoribulokinase/uridine kinase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSL3_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 4.320e-13
Identity = 29/38 (76.32%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 MVEGNYLLLKGVDPWSEASRLFDEVWAIRCPPEFCGER 38
            +VEGNYLLLKGVDPW++   LFD  WAIRCPPE CGER
Sbjct:  443 IVEGNYLLLKGVDPWNQVGGLFDVTWAIRCPPEVCGER 480          
BLAST of mRNA_H-elongata_contig157884.3760.1 vs. uniprot
Match: A0A6H5L6F9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6F9_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 5.430e-13
Identity = 29/38 (76.32%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    1 MVEGNYLLLKGVDPWSEASRLFDEVWAIRCPPEFCGER 38
            +VEGNYLLLKGVDPW +   LFD  WAIRCPPE CGER
Sbjct:  308 IVEGNYLLLKGVDPWDQVGGLFDVTWAIRCPPEVCGER 345          
BLAST of mRNA_H-elongata_contig157884.3760.1 vs. uniprot
Match: A0A7S0EB28_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EB28_9CRYP)

HSP 1 Score: 50.1 bits (118), Expect = 3.130e-6
Identity = 20/38 (52.63%), Postives = 25/38 (65.79%), Query Frame = 0
Query:    1 MVEGNYLLLKGVDPWSEASRLFDEVWAIRCPPEFCGER 38
            +VEGNY+LL  V+PWS+   LFDE W + CP     ER
Sbjct:   56 LVEGNYVLLYDVEPWSKLQHLFDEKWLVTCPEHILRER 93          
BLAST of mRNA_H-elongata_contig157884.3760.1 vs. uniprot
Match: A0A7S2UVB4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVB4_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 1.040e-5
Identity = 21/38 (55.26%), Postives = 26/38 (68.42%), Query Frame = 0
Query:    1 MVEGNYLLLKGVDPWSEASRLFDEVWAIRCPPEFCGER 38
            +VEGNY+LL GV+ W E S  FDE WA++C  E   ER
Sbjct:  147 IVEGNYVLLDGVEVWEEISSCFDETWAVKCSIETIRER 184          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig157884.3760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LSL3_ECTSI4.320e-1376.32Phosphoribulokinase/uridine kinase family protein ... [more]
A0A6H5L6F9_9PHAE5.430e-1376.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0EB28_9CRYP3.130e-652.63Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S2UVB4_9STRA1.040e-555.26Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..40
e-value: 1.1E-7
score: 33.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig157884contigH-elongata_contig157884:69..212 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig157884.3760.1mRNA_H-elongata_contig157884.3760.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig157884 39..212 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig157884.3760.1 ID=prot_H-elongata_contig157884.3760.1|Name=mRNA_H-elongata_contig157884.3760.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=48bp
MVEGNYLLLKGVDPWSEASRLFDEVWAIRCPPEFCGERWDTSNVPNP*
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