prot_H-elongata_contig157786.3753.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig157786.3753.1
Unique Name	prot_H-elongata_contig157786.3753.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	83

Homology

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BLAST of mRNA_H-elongata_contig157786.3753.1 vs. uniprot
Match: A0A6H5L470_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L470_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 2.010e-37
Identity = 69/82 (84.15%), Postives = 75/82 (91.46%), Query Frame = 0

Query:    2 KVQEAACSAMSVMEEEVGYGLQLYLDAIVQCFAAALIKYQTRSLIVLYDTVGTLADSTGPCLAQKNLLTVLMPPLMQRWNQV 83
            KVQEAACSA+SVMEEEVGY LQ+YLD IV+CFAAAL KYQTRSLIVLYDT+GTLAD+ G CLAQ  L+TVLMPPLMQRWNQV
Sbjct:  498 KVQEAACSALSVMEEEVGYRLQVYLDPIVRCFAAALAKYQTRSLIVLYDTIGTLADNAGNCLAQPALMTVLMPPLMQRWNQV 579

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BLAST of mRNA_H-elongata_contig157786.3753.1 vs. uniprot
Match: A0A1Y3EX98_9BILA (HEAT repeat protein (Fragment) n=1 Tax=Trichinella nativa TaxID=6335 RepID=A0A1Y3EX98_9BILA)

HSP 1 Score: 96.7 bits (239), Expect = 5.110e-22
Identity = 44/81 (54.32%), Postives = 59/81 (72.84%), Query Frame = 0

Query:    2 KVQEAACSAMSVMEEEVGYGLQLYLDAIVQCFAAALIKYQTRSLIVLYDTVGTLADSTGPCLAQKNLLTVLMPPLMQRWNQ 82
            +VQEAACSA + +EEE  + L  YL+ +VQ   AA  KYQ ++L++LYD VGTLA+S G CLA+  L+  LMPPLM +WN+
Sbjct:  216 RVQEAACSAFATLEEEANFELVPYLNEVVQTLCAAFEKYQAKNLLILYDAVGTLAESIGTCLAKPELVDALMPPLMAKWNR 296

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BLAST of mRNA_H-elongata_contig157786.3753.1 vs. uniprot
Match: UPI0001EFE231 (putative HEAT protein n=1 Tax=Trichinella spiralis TaxID=6334 RepID=UPI0001EFE231)

HSP 1 Score: 96.7 bits (239), Expect = 1.620e-21
Identity = 44/81 (54.32%), Postives = 59/81 (72.84%), Query Frame = 0

Query:    2 KVQEAACSAMSVMEEEVGYGLQLYLDAIVQCFAAALIKYQTRSLIVLYDTVGTLADSTGPCLAQKNLLTVLMPPLMQRWNQ 82
            +VQEAACSA + +EEE  + L  YL+ +VQ   AA  KYQ ++L++LYD VGTLA+S G CLA+  L+  LMPPLM +WN+
Sbjct:  573 RVQEAACSAFATLEEEANFELVPYLNEVVQTLCAAFEKYQAKNLLILYDAVGTLAESIGTCLAKPELVDALMPPLMAKWNR 653

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BLAST of mRNA_H-elongata_contig157786.3753.1 vs. uniprot
Match: A0A4Q0A0B3_9FUNG (Armadillo-type protein n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4Q0A0B3_9FUNG)

HSP 1 Score: 95.1 bits (235), Expect = 5.670e-21
Identity = 43/82 (52.44%), Postives = 58/82 (70.73%), Query Frame = 0

Query:    2 KVQEAACSAMSVMEEEVGYGLQLYLDAIVQCFAAALIKYQTRSLIVLYDTVGTLADSTGPCLAQKNLLTVLMPPLMQRWNQV 83
            +VQEAACSA + +EEE G  L  YLD I+QC   A  KYQ ++L++LYD VGTLADS G  L +   + +LMPPL+ +W+Q+
Sbjct:  503 RVQEAACSAFATIEEEAGAELAPYLDPIIQCLVQAFTKYQKKNLLILYDAVGTLADSVGEALNRPEYIQMLMPPLINKWHQL 584

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BLAST of mRNA_H-elongata_contig157786.3753.1 vs. uniprot
Match: A0A8K0JM43_9TREE (Uncharacterized protein n=1 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JM43_9TREE)

HSP 1 Score: 95.1 bits (235), Expect = 5.680e-21
Identity = 43/79 (54.43%), Postives = 58/79 (73.42%), Query Frame = 0

Query:    2 KVQEAACSAMSVMEEEVGYGLQLYLDAIVQCFAAALIKYQTRSLIVLYDTVGTLADSTGPCLAQKNLLTVLMPPLMQRW 80
            +VQEA CSA + +EEE G  L+ Y+  I+Q   AA  KYQ R+L++LYD +GTLADS GP L+++  L VL+PPLMQ+W
Sbjct:  516 RVQEAGCSAFATLEEEAGTALEPYMQPILQSLVAAFHKYQQRNLLILYDAIGTLADSVGPALSKEEHLQVLIPPLMQKW 594

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BLAST of mRNA_H-elongata_contig157786.3753.1 vs. uniprot
Match: A0A0V1BSF2_TRISP (Transportin-1 n=15 Tax=Trichinella TaxID=6333 RepID=A0A0V1BSF2_TRISP)

HSP 1 Score: 95.1 bits (235), Expect = 5.680e-21
Identity = 43/81 (53.09%), Postives = 59/81 (72.84%), Query Frame = 0

Query:    2 KVQEAACSAMSVMEEEVGYGLQLYLDAIVQCFAAALIKYQTRSLIVLYDTVGTLADSTGPCLAQKNLLTVLMPPLMQRWNQ 82
            +VQ+AACSA + +EEE  + L  YL+ +VQ   AA  KYQ ++L++LYD VGTLA+S G CLA+  L+  LMPPLM +WN+
Sbjct:  527 RVQKAACSAFATLEEEANFELVPYLNEVVQTLCAAFEKYQAKNLLILYDAVGTLAESIGTCLAKPELVDALMPPLMAKWNR 607

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BLAST of mRNA_H-elongata_contig157786.3753.1 vs. uniprot
Match: M5BX71_THACB (Rhizoctonia solani AG1-IB WGS project CAOJ00000000 data, isolate 7/3/14, contig 12774 n=1 Tax=Thanatephorus cucumeris (strain AG1-IB / isolate 7/3/14) TaxID=1108050 RepID=M5BX71_THACB)

HSP 1 Score: 89.7 bits (221), Expect = 4.950e-20
Identity = 40/82 (48.78%), Postives = 59/82 (71.95%), Query Frame = 0

Query:    2 KVQEAACSAMSVMEEEVGYGLQLYLDAIVQCFAAALIKYQTRSLIVLYDTVGTLADSTGPCLAQKNLLTVLMPPLMQRWNQV 83
            +VQEA CSA + +EE+ G  L+ YLD I++    A  KYQ ++L++LYD +GTLAD+ G  L +K +L VLMPPL++RW ++
Sbjct:  101 RVQEAGCSAFATLEEDAGPALEPYLDPILRNLVFAFQKYQAKNLLILYDAIGTLADAVGSSLNRKEVLDVLMPPLVERWGRL 182

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BLAST of mRNA_H-elongata_contig157786.3753.1 vs. uniprot
Match: A0A7S0DC63_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DC63_9EUKA)

HSP 1 Score: 91.7 bits (226), Expect = 9.290e-20
Identity = 43/82 (52.44%), Postives = 59/82 (71.95%), Query Frame = 0

Query:    2 KVQEAACSAMSVMEEEVGYGLQLYLDAIVQCFAAALIKYQTRSLIVLYDTVGTLADSTGPCLAQKNLLTVLMPPLMQRWNQV 83
            +VQEAACSA + +EEE    L  YL+ I++    AL +YQ ++L+VLYD +GTLA+S GP L +K LL +LMPPLM +W Q+
Sbjct:  478 RVQEAACSAFATLEEEAQERLIPYLEPILKNLMFALQRYQAKNLLVLYDAIGTLAESVGPALGRKELLKILMPPLMSKWQQL 559

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BLAST of mRNA_H-elongata_contig157786.3753.1 vs. uniprot
Match: A0A077X3W6_9FUNG (Importin N-terminal domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077X3W6_9FUNG)

HSP 1 Score: 90.9 bits (224), Expect = 1.740e-19
Identity = 42/82 (51.22%), Postives = 58/82 (70.73%), Query Frame = 0

Query:    2 KVQEAACSAMSVMEEEVGYGLQLYLDAIVQCFAAALIKYQTRSLIVLYDTVGTLADSTGPCLAQKNLLTVLMPPLMQRWNQV 83
            +VQEAACS+ S++EE V   L  YL  I+   A A  KYQ R+L++LYDTVGTLAD  GP + Q+  + ++MPPL+Q+W Q+
Sbjct:  506 RVQEAACSSFSLLEENVTTDLIPYLHPILMTLATAFEKYQHRNLLLLYDTVGTLADVVGPAINQEEFIRIIMPPLIQKWQQI 587

[Close]

BLAST of mRNA_H-elongata_contig157786.3753.1 vs. uniprot
Match: A0A8H7LU19_9AGAM (ARM repeat-containing protein (Fragment) n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H7LU19_9AGAM)

HSP 1 Score: 90.1 bits (222), Expect = 2.870e-19
Identity = 40/82 (48.78%), Postives = 59/82 (71.95%), Query Frame = 0

Query:    2 KVQEAACSAMSVMEEEVGYGLQLYLDAIVQCFAAALIKYQTRSLIVLYDTVGTLADSTGPCLAQKNLLTVLMPPLMQRWNQV 83
            +VQEA CSA + +EE+ G  L+ YLD I++    A  KYQ ++L++LYD +GTLAD+ G  L +K +L VLMPPL++RW ++
Sbjct:   86 RVQEAGCSAFATLEEDAGPALEPYLDPILRNLVFAFQKYQAKNLLILYDAIGTLADAVGSALNRKEVLDVLMPPLVERWGRL 167

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig157786.3753.1 vs. uniprot

BLAST of mRNA_H-elongata_contig157786.3753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L470_9PHAE	2.010e-37	84.15	Importin N-terminal domain-containing protein n=2 ...	[more]
A0A1Y3EX98_9BILA	5.110e-22	54.32	HEAT repeat protein (Fragment) n=1 Tax=Trichinella...	[more]
UPI0001EFE231	1.620e-21	54.32	putative HEAT protein n=1 Tax=Trichinella spiralis...	[more]
A0A4Q0A0B3_9FUNG	5.670e-21	52.44	Armadillo-type protein n=1 Tax=Dimargaris cristall...	[more]
A0A8K0JM43_9TREE	5.680e-21	54.43	Uncharacterized protein n=1 Tax=Filobasidium flori...	[more]
A0A0V1BSF2_TRISP	5.680e-21	53.09	Transportin-1 n=15 Tax=Trichinella TaxID=6333 RepI...	[more]
M5BX71_THACB	4.950e-20	48.78	Rhizoctonia solani AG1-IB WGS project CAOJ00000000...	[more]
A0A7S0DC63_9EUKA	9.290e-20	52.44	Hypothetical protein (Fragment) n=1 Tax=Amorphochl...	[more]
A0A077X3W6_9FUNG	1.740e-19	51.22	Importin N-terminal domain-containing protein n=1 ...	[more]
A0A8H7LU19_9AGAM	2.870e-19	48.78	ARM repeat-containing protein (Fragment) n=1 Tax=R...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..83 e-value: 1.1E-24 score: 88.7
IPR040122	Importin beta family	PANTHER	PTHR10527	IMPORTIN BETA	coord: 2..83
None	No IPR available	PANTHER	PTHR10527:SF3	FI21453P1	coord: 2..83
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..38
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 39..83
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 2..82

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig157786	contig	H-elongata_contig157786:486..734 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig157786.3753.1	mRNA_H-elongata_contig157786.3753.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig157786 486..734 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig157786.3753.1 ID=prot_H-elongata_contig157786.3753.1|Name=mRNA_H-elongata_contig157786.3753.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
MKVQEAACSAMSVMEEEVGYGLQLYLDAIVQCFAAALIKYQTRSLIVLYD
TVGTLADSTGPCLAQKNLLTVLMPPLMQRWNQV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR040122	Importin_beta
IPR016024	ARM-type_fold