prot_H-elongata_contig157379.3740.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig157379.3740.1
Unique Nameprot_H-elongata_contig157379.3740.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length77
Homology
BLAST of mRNA_H-elongata_contig157379.3740.1 vs. uniprot
Match: A0A6H5JRV2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV2_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.290e-13
Identity = 39/71 (54.93%), Postives = 46/71 (64.79%), Query Frame = 0
Query:    4 VTSGLENIRMYLDDAIGFDDS-SVKHVATLATFFARLRLHNLKLSPNKTRTGATRVDFLGHVISHDGIRPN 73
            V  GLE +  YLDD I FD+  S+ HV  +  FF RLR H LKLSP KTR GAT  +FLGH IS  G+ P+
Sbjct:  153 VVHGLERVLAYLDDVICFDEEPSLGHVLNMIEFFRRLRQH-LKLSPGKTRVGATHANFLGHTISPAGVSPD 222          
BLAST of mRNA_H-elongata_contig157379.3740.1 vs. uniprot
Match: UPI001899E8EF (uncharacterized protein LOC119444767 n=1 Tax=Dermacentor silvarum TaxID=543639 RepID=UPI001899E8EF)

HSP 1 Score: 66.2 bits (160), Expect = 6.380e-11
Identity = 29/74 (39.19%), Postives = 46/74 (62.16%), Query Frame = 0
Query:    1 MRLVTSGLENIRMYLDDAIGFDDSSVKHVATLATFFARLRLHNLKLSPNKTRTGATRVDFLGHVISHDGIRPNL 74
            MR V +G+ ++  Y DD +   D+   HV TL  FF ++R  +L + P+K+  G+T V+FLGH++ H  +RP L
Sbjct: 1177 MRKVVAGISHVHHYFDDVLIATDTWETHVNTLECFFRQVRRGHLTIKPSKSEVGSTTVNFLGHIVGHGVLRPQL 1250          
BLAST of mRNA_H-elongata_contig157379.3740.1 vs. uniprot
Match: A0A131XKF8_9ACAR (RNA-directed DNA polymerase n=1 Tax=Hyalomma excavatum TaxID=257692 RepID=A0A131XKF8_9ACAR)

HSP 1 Score: 63.2 bits (152), Expect = 7.710e-10
Identity = 28/74 (37.84%), Postives = 44/74 (59.46%), Query Frame = 0
Query:    1 MRLVTSGLENIRMYLDDAIGFDDSSVKHVATLATFFARLRLHNLKLSPNKTRTGATRVDFLGHVISHDGIRPNL 74
            MR V +G+ ++  Y DD +   D+   H  TL  FF ++R  +L + P+K+  G+T V FLGH++ H  +RP L
Sbjct:  788 MRKVVAGIPHVHHYFDDVLIATDTWETHTDTLECFFRQVRRGHLTIKPSKSEIGSTSVKFLGHIVGHGVLRPQL 861          
BLAST of mRNA_H-elongata_contig157379.3740.1 vs. uniprot
Match: A0A085NA80_9BILA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085NA80_9BILA)

HSP 1 Score: 62.8 bits (151), Expect = 9.940e-10
Identity = 34/75 (45.33%), Postives = 45/75 (60.00%), Query Frame = 0
Query:    1 MRLVTSGLE--NIRMYLDDAIGFDDSSVKHVATLATFFARLRLHNLKLSPNKTRTGATRVDFLGHVISHDGIRPN 73
            M  V +GL+     +YLDD I F  S+ +H+  LA  F RLR   LK++ +K R     V FLGHV+ HDGIRP+
Sbjct:   68 MERVLAGLKWNTCLVYLDDIIIFSRSADEHIEQLARVFQRLRTAGLKVNASKCRLFRKEVQFLGHVVGHDGIRPD 142          
BLAST of mRNA_H-elongata_contig157379.3740.1 vs. uniprot
Match: A0A0A9Y3F4_LYGHE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Y3F4_LYGHE)

HSP 1 Score: 58.9 bits (141), Expect = 1.420e-9
Identity = 26/72 (36.11%), Postives = 43/72 (59.72%), Query Frame = 0
Query:    1 MRLVTSGLENIRMYLDDAIGFDDSSVKHVATLATFFARLRLHNLKLSPNKTRTGATRVDFLGHVISHDGIRP 72
            M  VT GL+N+ +YLDD +    S  +H+  L   F R + + + ++  K   G T ++FLGH++S DG++P
Sbjct:    4 MNEVTRGLDNVVVYLDDCLISSTSEEEHLNDLRKLFNRFKEYGIVINAAKCEFGKTEIEFLGHLVSPDGVKP 75          
BLAST of mRNA_H-elongata_contig157379.3740.1 vs. uniprot
Match: A0A6B0VFR6_IXORI (RNA-directed DNA polymerase n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A6B0VFR6_IXORI)

HSP 1 Score: 62.4 bits (150), Expect = 1.450e-9
Identity = 29/74 (39.19%), Postives = 43/74 (58.11%), Query Frame = 0
Query:    1 MRLVTSGLENIRMYLDDAIGFDDSSVKHVATLATFFARLRLHNLKLSPNKTRTGATRVDFLGHVISHDGIRPNL 74
            MR V  GL N+  Y DD +   ++  +H+ TL +FF R+R   L + P K+  G   V FLGH+I H+ +RP +
Sbjct: 1204 MRKVVQGLPNVYHYFDDVLIATENWEEHLETLKSFFQRVRDAGLTIRPTKSEVGFASVKFLGHIIGHNLLRPQI 1277          
BLAST of mRNA_H-elongata_contig157379.3740.1 vs. uniprot
Match: UPI001EF253D1 (reverse transcriptase n=1 Tax=Streptococcus dysgalactiae TaxID=1334 RepID=UPI001EF253D1)

HSP 1 Score: 61.2 bits (147), Expect = 3.480e-9
Identity = 29/72 (40.28%), Postives = 41/72 (56.94%), Query Frame = 0
Query:    1 MRLVTSGLENIRMYLDDAIGFDDSSVKHVATLATFFARLRLHNLKLSPNKTRTGATRVDFLGHVISHDGIRP 72
            M  VT GL ++ +YLDD +    S   H+  L   F RL  H + ++P K   G + +DFLGH IS +G+RP
Sbjct:   96 MNEVTRGLTHVYVYLDDILVASSSPEDHMTHLRALFDRLVEHGVTINPAKCELGKSTIDFLGHTISEEGLRP 167          
BLAST of mRNA_H-elongata_contig157379.3740.1 vs. uniprot
Match: UPI001EAF2419 (uncharacterized protein LOC123987739 n=1 Tax=Osmia bicornis bicornis TaxID=1437191 RepID=UPI001EAF2419)

HSP 1 Score: 61.2 bits (147), Expect = 3.650e-9
Identity = 30/73 (41.10%), Postives = 43/73 (58.90%), Query Frame = 0
Query:    1 MRLVTSGLENIRMYLDDAIGFDDSSVKHVATLATFFARLRLHNLKLSPNKTRTGATRVDFLGHVISHDGIRPN 73
            M  VTSGLEN+ +++DD I F  S  +H   +   F RLR + L L  NK       V +LGH++S DG++P+
Sbjct:  303 MNRVTSGLENVLVFIDDMIVFSSSLREHEIKVKKLFDRLREYGLTLQTNKCEFLRKEVAYLGHILSADGVKPD 375          
BLAST of mRNA_H-elongata_contig157379.3740.1 vs. uniprot
Match: UPI001EAED85B (uncharacterized protein LOC123988229 n=2 Tax=Osmia bicornis bicornis TaxID=1437191 RepID=UPI001EAED85B)

HSP 1 Score: 61.2 bits (147), Expect = 3.670e-9
Identity = 30/73 (41.10%), Postives = 43/73 (58.90%), Query Frame = 0
Query:    1 MRLVTSGLENIRMYLDDAIGFDDSSVKHVATLATFFARLRLHNLKLSPNKTRTGATRVDFLGHVISHDGIRPN 73
            M  VTSGLEN+ +++DD I F  S  +H   +   F RLR + L L  NK       V +LGH++S DG++P+
Sbjct:  676 MNRVTSGLENVLVFIDDMIVFSSSLREHEIKVKKLFDRLREYGLTLQTNKCEFLRKEVAYLGHILSADGVKPD 748          
BLAST of mRNA_H-elongata_contig157379.3740.1 vs. uniprot
Match: UPI001EAF62D6 (uncharacterized protein LOC123988239 n=1 Tax=Osmia bicornis bicornis TaxID=1437191 RepID=UPI001EAF62D6)

HSP 1 Score: 61.2 bits (147), Expect = 3.680e-9
Identity = 30/73 (41.10%), Postives = 43/73 (58.90%), Query Frame = 0
Query:    1 MRLVTSGLENIRMYLDDAIGFDDSSVKHVATLATFFARLRLHNLKLSPNKTRTGATRVDFLGHVISHDGIRPN 73
            M  VTSGLEN+ +++DD I F  S  +H   +   F RLR + L L  NK       V +LGH++S DG++P+
Sbjct:  676 MNRVTSGLENVLVFIDDMIVFSSSLREHEIKVKKLFDRLREYGLTLQTNKCEFLRKEVAYLGHILSADGVKPD 748          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig157379.3740.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRV2_9PHAE2.290e-1354.93Integrase catalytic domain-containing protein n=1 ... [more]
UPI001899E8EF6.380e-1139.19uncharacterized protein LOC119444767 n=1 Tax=Derma... [more]
A0A131XKF8_9ACAR7.710e-1037.84RNA-directed DNA polymerase n=1 Tax=Hyalomma excav... [more]
A0A085NA80_9BILA9.940e-1045.33Reverse transcriptase domain-containing protein (F... [more]
A0A0A9Y3F4_LYGHE1.420e-936.11Reverse transcriptase domain-containing protein (F... [more]
A0A6B0VFR6_IXORI1.450e-939.19RNA-directed DNA polymerase n=1 Tax=Ixodes ricinus... [more]
UPI001EF253D13.480e-940.28reverse transcriptase n=1 Tax=Streptococcus dysgal... [more]
UPI001EAF24193.650e-941.10uncharacterized protein LOC123987739 n=1 Tax=Osmia... [more]
UPI001EAED85B3.670e-941.10uncharacterized protein LOC123988229 n=2 Tax=Osmia... [more]
UPI001EAF62D63.680e-941.10uncharacterized protein LOC123988239 n=1 Tax=Osmia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 1..71
e-value: 7.4E-15
score: 56.9
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 10..73
IPR000489Pterin-binding domainPROSITEPS50972PTERIN_BINDINGcoord: 1..76
score: 9.477

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig157379contigH-elongata_contig157379:205..435 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig157379.3740.1mRNA_H-elongata_contig157379.3740.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig157379 205..435 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig157379.3740.1 ID=prot_H-elongata_contig157379.3740.1|Name=mRNA_H-elongata_contig157379.3740.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp
MRLVTSGLENIRMYLDDAIGFDDSSVKHVATLATFFARLRLHNLKLSPNK
TRTGATRVDFLGHVISHDGIRPNLCV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000489Pterin-binding_dom