prot_H-elongata_contig157223.3726.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig157223.3726.1
Unique Nameprot_H-elongata_contig157223.3726.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length268
Homology
BLAST of mRNA_H-elongata_contig157223.3726.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 2.340e-51
Identity = 104/277 (37.55%), Postives = 149/277 (53.79%), Query Frame = 0
Query:    2 KFHQVLGHPAEQITSNTVRMAGVKLSGIWRPCVHCSESSVWRFAVSKSTENRAERRAGRLFIDLSGPFHETSLEGNRFVMLCIDDFTCFKMVRFLKHKSDATNALRDIINEYFAPEGLK--IDVIRTDGGGEWHG-QFLSFLSELGIKRESTPPYTPQYNGVVERALGLLRDKTVA-------LLRGVMEGKIDLLWAEAMAYACDMWNRCTFSSLDSGTSPYELWYGRRPTFDNIHPFGTMGYLRRSKPGHKLAPRGASCIMLGLTPDCPRETFRV 268
            +FH +  H  E +   T +  G KL G    C  CS S   R  + + T+ R++++ GR+F DL G     S+ G  + ++  DDFT    + FL++KSDA +A R  +    A  G+   ++++R+D GG++ G  F S  +EL IK+E TP Y+PQYNGV ER LGL+ +  +A       L   V   K D LWAEAM +AC+  N    S+     SPYE+WYG  P     +PF    Y R  +P  KL P+G SC  +G + D PR+  RV
Sbjct:   36 EFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFADLGGRKDIASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLASVRA-NGVPSFVEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFSKPAYCRWQRPS-KLLPKGESCFYVGPSRDHPRDCHRV 309          
BLAST of mRNA_H-elongata_contig157223.3726.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 2.200e-49
Identity = 105/276 (38.04%), Postives = 148/276 (53.62%), Query Frame = 0
Query:    2 KFHQVLGHPAEQITSNTVRMAGVKLSGIWRPCVHCSESSVWRFAVSKSTENRAERRAGRLFIDLSGPFHETSLEGNRFVMLCIDDFTCFKMVRFLKHKSDATNALRDIINEYFAPEGLK-IDVIRTDGGGEWHG-QFLSFLSELGIKRESTPPYTPQYNGVVERALGLLRDKTVA-------LLRGVMEGKIDLLWAEAMAYACDMWNRCTFSSLDSGTSPYELWYGRRPTFDNIHPFGTMGYLRRSKPGHKLAPRGASCIMLGLTPDCPRETFRV 268
            +FH +  H  E +   T +  G KL G    C  CS S   R  + + T+ R++++ GR+F+DL G     S+ G  + M+  DDFT    + FLK++SDA  A R  +    A      ++++R+D GGE+ G +F S  +EL IK+E TP Y+PQYNGV ER LGL+ +  +A       L   V   K D LWAEAM +AC+  N    S+     SPYE+WYG  P     +PF    Y R  +P  KL P+G SC  +G + D PR+  RV
Sbjct:  256 EFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWMYFLKNESDAGGAFRTFLASVRANIVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVGPSRDHPRDCHRV 529          
BLAST of mRNA_H-elongata_contig157223.3726.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 2.310e-49
Identity = 104/277 (37.55%), Postives = 153/277 (55.23%), Query Frame = 0
Query:    2 KFHQVLGHPAEQITSNTVRMAGVKLSGIWRPCVHCSESSVWRFAVSKSTENRAERRAGRLFIDLSGPFHETSLEGNRFVMLCIDDFTCFKMVRFLKHKSDATNALRDIINEYFAPEGLK--IDVIRTDGGGEWHG-QFLSFLSELGIKRESTPPYTPQYNGVVERALGLLRDKTVA-------LLRGVMEGKIDLLWAEAMAYACDMWNRCTFSSLDSGTSPYELWYGRRPTFDNIHPFGTMGYLRRSKPGHKLAPRGASCIMLGLTPDCPRETFRV 268
            +FH +  H  + +   T +  G +L G    C  CS +   +  +++ T++R++++ GR+F+DL G     S+ G  + M+  DDFT    + FLKHKSDA  A R  +    A +G+   ++++R+D GGE+ G +F S  +EL IK+E TP Y+PQYNGV ER LGL+ +  +A       L   V   K D LWAEAM +AC+  N    S+     SPYE+WYG  P     +PF    Y R  +P  KL P+G SC  +G + D PR+  RV
Sbjct:  668 EFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRA-DGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKGESCFYVGPSRDHPRDCHRV 941          
BLAST of mRNA_H-elongata_contig157223.3726.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 2.330e-49
Identity = 104/277 (37.55%), Postives = 153/277 (55.23%), Query Frame = 0
Query:    2 KFHQVLGHPAEQITSNTVRMAGVKLSGIWRPCVHCSESSVWRFAVSKSTENRAERRAGRLFIDLSGPFHETSLEGNRFVMLCIDDFTCFKMVRFLKHKSDATNALRDIINEYFAPEGLK--IDVIRTDGGGEWHG-QFLSFLSELGIKRESTPPYTPQYNGVVERALGLLRDKTVA-------LLRGVMEGKIDLLWAEAMAYACDMWNRCTFSSLDSGTSPYELWYGRRPTFDNIHPFGTMGYLRRSKPGHKLAPRGASCIMLGLTPDCPRETFRV 268
            +FH +  H  + +   T +  G +L G    C  CS +   +  +++ T++R++++ GR+F+DL G     S+ G  + M+  DDFT    + FLKHKSDA  A R  +    A +G+   ++++R+D GGE+ G +F S  +EL IK+E TP Y+PQYNGV ER LGL+ +  +A       L   V   K D LWAEAM +AC+  N    S+     SPYE+WYG  P     +PF    Y R  +P  KL P+G SC  +G + D PR+  RV
Sbjct:  375 EFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRA-DGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKGESCFYVGPSRDHPRDCHRV 648          
BLAST of mRNA_H-elongata_contig157223.3726.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 1.300e-48
Identity = 105/277 (37.91%), Postives = 150/277 (54.15%), Query Frame = 0
Query:    2 KFHQVLGHPAEQITSNTVRMAGVKLSGIWRPCVHCSESSVWRFAVSKSTENRAERRAGRLFIDLSGPFHETSLEGNRFVMLCIDDFTCFKMVRFLKHKSDATNALRDIINEYFAPEGLK--IDVIRTDGGGEWHG-QFLSFLSELGIKRESTPPYTPQYNGVVERALGLLRDKTVA-------LLRGVMEGKIDLLWAEAMAYACDMWNRCTFSSLDSGTSPYELWYGRRPTFDNIHPFGTMGYLRRSKPGHKLAPRGASCIMLGLTPDCPRETFRV 268
            +FH +  H  E +   T +  G KL G    C  CS S   R  + + T+ R++++ GR+F+DL G     S+ G  + M+  DDFT    + FL++KSDA +A R  +    A  G+   ++++R+D GGE+ G +F S  +EL IK+E TP Y+PQYNGV ER LGL+ +  +A       L   V   K D LWAEAM +AC+  N    S+      PYE+WYG  P     +PF    Y R  +P  KL P+G SC  +G + D PR+  RV
Sbjct:  134 EFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDSASVGGKHYPMIVKDDFTRRTWMYFLRNKSDAGSAFRTFLASVRA-NGVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMPPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVGPSRDHPRDCHRV 407          
BLAST of mRNA_H-elongata_contig157223.3726.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 2.700e-48
Identity = 106/277 (38.27%), Postives = 150/277 (54.15%), Query Frame = 0
Query:    2 KFHQVLGHPAEQITSNTVRMAGVKLSGIWRPCVHCSESSVWRFAVSKSTENRAERRAGRLFIDLSGPFHETSLEGNRFVMLCIDDFTCFKMVRFLKHKSDATNALRDIINEYFAPEGLK--IDVIRTDGGGEWHG-QFLSFLSELGIKRESTPPYTPQYNGVVERALGLLRDKTVA-------LLRGVMEGKIDLLWAEAMAYACDMWNRCTFSSLDSGTSPYELWYGRRPTFDNIHPFGTMGYLRRSKPGHKLAPRGASCIMLGLTPDCPRETFRV 268
            +FH +  H  E +   T +  G KL G    C  CS S   R  +   T+ R++++ GR+F+DL G     S+ G  + M+  DDFT    + FL++KSDA +A R  +    A  G+   ++++R+D GGE+ G +F S  +EL IK+E TP Y+PQYNGV ER LGL+ +  +A       L   V   K D LWAEAM +AC+  N    S+     SPYE+WYG  P     +PF    Y R  +P  KL P+G SC  +G + D PR+  RV
Sbjct:  189 EFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVGETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWICFLRNKSDAGSAFRTFLASVRA-NGVPSFVEIVRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVGPSRDHPRDCHRV 462          
BLAST of mRNA_H-elongata_contig157223.3726.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 3.360e-48
Identity = 102/277 (36.82%), Postives = 153/277 (55.23%), Query Frame = 0
Query:    2 KFHQVLGHPAEQITSNTVRMAGVKLSGIWRPCVHCSESSVWRFAVSKSTENRAERRAGRLFIDLSGPFHETSLEGNRFVMLCIDDFTCFKMVRFLKHKSDATNALRDIINEYFAPEGLK--IDVIRTDGGGEWHG-QFLSFLSELGIKRESTPPYTPQYNGVVERALGLLRDKTVA-------LLRGVMEGKIDLLWAEAMAYACDMWNRCTFSSLDSGTSPYELWYGRRPTFDNIHPFGTMGYLRRSKPGHKLAPRGASCIMLGLTPDCPRETFRV 268
            +FH +  H  E +   T +  G++L+G    C  CS S  ++  ++  T+ R++++ GR+F+DL G     S+ G  + M+  DDFT    + FLK KSDA +A R  +    A +G+   ++++R+D GGE+ G +F S  +EL IK+E TP Y+PQYNGV ER LGL+    +A       L   V   K D LWAEAM +AC+  N    S+     SPYE+W+G   +    +PF    Y R  +P  KL P+G +C  +G + D PR+  RV
Sbjct:  574 EFHNIYAHSHEGLLRTTAKRLGIELTGKMHACTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASVRA-DGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHGEA-SHARPYPFLKPAYCRWQRPS-KLLPKGEACFYVGPSRDHPRDCHRV 847          
BLAST of mRNA_H-elongata_contig157223.3726.1 vs. uniprot
Match: A0A6H5LL52_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL52_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 9.120e-43
Identity = 105/267 (39.33%), Postives = 141/267 (52.81%), Query Frame = 0
Query:    4 HQVLGHPAEQITSNTVRMAGVKLSG-IWRPCVHCSESSVWRFAVSKSTENRAERRAGRLFIDLSGPFHETSLEGNRFVMLCIDDFTCFKMVRFLKHKSDATNALRDIINEYFAPE-GLKIDVIRTDGGGEWHGQFLSFLSELGIKRESTPPYTPQYNGVVERALGLLRDKTVALLRGVMEGKIDL-----LWAEAMAYACDMWNRCTFSSLDSG-TSPYELWYGRRPTFDNIHPFGTMGYLRRSKPGHKLAPRGASCIMLGLTPDCP 262
            H   GH  E++   T +  GV+L+G    PC+ CS S      +SKST+ RA  +  RLF++L G     S+ GN + ++  DD T +  V FLKHKSDA  A    + +Y A     ++ V RTDGGGE+ GQF       GIK+E TPP TP+YNGV ERALGLL D  +A      E   D      LWAEA++ AC   N CT ++ + G  SP EL++G  P   + HPF     + +S+   +  PR      LGL    P
Sbjct:  139 HNSHGHTHEELLQKTAKQQGVQLTGGPLLPCLGCSMSKGQVKPISKSTDTRAANKLFRLFLNLGGRMQFKSIGGNWYTLIIRDDCTRWTRVFFLKHKSDAAAAFEQYLADYRAETVPCEVFVARTDGGGEFQGQFAEVCRRSGIKQEFTPPNTPKYNGVAERALGLLADSALASRIQAKEMFPDAPVSPGLWAEAISCACHQMN-CTATTGNPGHKSPEELFHGTPPPVGSTHPF-LKPLVFKSRRKARSQPRARKDGTLGLPTITP 403          
BLAST of mRNA_H-elongata_contig157223.3726.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 2.170e-38
Identity = 97/276 (35.14%), Postives = 139/276 (50.36%), Query Frame = 0
Query:    3 FHQVLGHPAEQITSNTVRMAGVKLSGIWRPCVHCSESSVWRFAVSKSTENRAERRAGRLFIDLSGPFHETSLEGNRFVMLCIDDFTCFKMVRFLKHKSDATNALRDIINEYFAPEGLKIDV--IRTDGGGEW-HGQFLSFLSELGIKRESTPPYTPQYNGVVERALGLLRDKTVA-------LLRGVMEGKIDLLWAEAMAYACDMWNRCTFSSLDSGTSPYELWYGRRPTFDNIHPFGTMGYLRRSKPGHKLAPRGASCIMLGLTPDCPRETFRV 268
            FH   GH  E +   T +  G  L G  R C+ CS +      +   T  RA ++  R+F+DLSG     SL G  + ++  DD+T +  V FLKHKSDA  A    + E  A  G   DV  +R+D GGE+  G+F     +  IK+E TP ++P+YNGV ERALGL++D  +A       L  G        LWAEA+A++C+  N  + +S     SPYE+W+G  P     +PF     + + K  HK  P+   C  LG   +  R+  R+
Sbjct:  513 FHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRA-NGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPN--YPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPF-LKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVRI 784          
BLAST of mRNA_H-elongata_contig157223.3726.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 2.180e-38
Identity = 97/276 (35.14%), Postives = 139/276 (50.36%), Query Frame = 0
Query:    3 FHQVLGHPAEQITSNTVRMAGVKLSGIWRPCVHCSESSVWRFAVSKSTENRAERRAGRLFIDLSGPFHETSLEGNRFVMLCIDDFTCFKMVRFLKHKSDATNALRDIINEYFAPEGLKIDV--IRTDGGGEW-HGQFLSFLSELGIKRESTPPYTPQYNGVVERALGLLRDKTVA-------LLRGVMEGKIDLLWAEAMAYACDMWNRCTFSSLDSGTSPYELWYGRRPTFDNIHPFGTMGYLRRSKPGHKLAPRGASCIMLGLTPDCPRETFRV 268
            FH   GH  E +   T +  G  L G  R C+ CS +      +   T  RA ++  R+F+DLSG     SL G  + ++  DD+T +  V FLKHKSDA  A    + E  A  G   DV  +R+D GGE+  G+F     +  IK+E TP ++P+YNGV ERALGL++D  +A       L  G        LWAEA+A++C+  N  + +S     SPYE+W+G  P     +PF     + + K  HK  P+   C  LG   +  R+  R+
Sbjct:  526 FHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRA-NGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPN--YPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPF-LKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVRI 797          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig157223.3726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVR5_9PHAE2.340e-5137.55Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JV76_9PHAE2.200e-4938.04Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JBA7_9PHAE2.310e-4937.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE2.330e-4937.55Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3Y0_9PHAE1.300e-4837.91Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JRL9_9PHAE2.700e-4838.27Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5K2M6_9PHAE3.360e-4836.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LL52_9PHAE9.120e-4339.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JZQ8_9PHAE2.170e-3835.14Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE2.180e-3835.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 48..234
e-value: 3.6E-26
score: 93.6
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 60..171
e-value: 2.2E-13
score: 50.5
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 53..221
score: 19.352
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 42..223
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 42..223
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 59..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig157223contigH-elongata_contig157223:131..934 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig157223.3726.1mRNA_H-elongata_contig157223.3726.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig157223 131..934 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig157223.3726.1 ID=prot_H-elongata_contig157223.3726.1|Name=mRNA_H-elongata_contig157223.3726.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=268bp
MKFHQVLGHPAEQITSNTVRMAGVKLSGIWRPCVHCSESSVWRFAVSKST
ENRAERRAGRLFIDLSGPFHETSLEGNRFVMLCIDDFTCFKMVRFLKHKS
DATNALRDIINEYFAPEGLKIDVIRTDGGGEWHGQFLSFLSELGIKREST
PPYTPQYNGVVERALGLLRDKTVALLRGVMEGKIDLLWAEAMAYACDMWN
RCTFSSLDSGTSPYELWYGRRPTFDNIHPFGTMGYLRRSKPGHKLAPRGA
SCIMLGLTPDCPRETFRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf