prot_H-elongata_contig15719.3721.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15719.3721.1
Unique Nameprot_H-elongata_contig15719.3721.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length788
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15719.3721.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..787
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15719contigH-elongata_contig15719:2192..6343 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15719.3721.1mRNA_H-elongata_contig15719.3721.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15719 395..7446 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15719.3721.1 ID=prot_H-elongata_contig15719.3721.1|Name=mRNA_H-elongata_contig15719.3721.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=788bp
MDCKRTPCAAVGMAPATTTAAAAPAPSLEPDPGIPTHDAFATIEPTTNAA
TTPVSDPAPGPALAPATTTACAFPSVDKGRERLESVCAATAMTALSDVRT
SGEASTCGAESFGIPSPSHCASSEIEASDAKIEESKSGTNDEDYNNHVSA
ARTASGGRRKLLEFQGPSEGGMEGDRGGDVDGDGAEGAAKKEDAAFVMAP
VTPLRDPSGVEMEKIVMRGASGRAVNSAKAARRRKSLAGNKGHECCAAVT
TTVGKCSSVADTDQAEEAQQELDIDGSSQGFGGIDVEDGGTGRDESSCIP
VRRRKKLQSESTKGCPLTTPALASVGEKISGKDGLRASHEVGDLKREDAE
RQSADAGCLSFQQPGDRGFGGEVVPSTTGDYTATIHSALVGVFGPEGSGD
DGQRARNKVGPPDELTKKRSDEVGCFSAQRPRGKGSGGKAIPSLAGAGAT
SDHFSCQSAVGQSAQSKSSIRRRRNARSPPRNLGKAAGAETGEALAAREE
GIEEALLMGGDAFTPMCAQALNGLPLRSNVNPERRVANTVKLAAEADICE
AKAKAEKLVGISSSSPVSPVITALTDETIPRPPRNADDLSIFAGGCVETE
HGFPSDRTAQANGSDFDISISERLKVDGQEGSKGATSVVEHEGAVSEKIN
NAHLLAIEGGCVGTEHGFPDWAWQTDPHEFDISIAERLRMSAQDGGRDGG
SGRTARRRRHAKAPSHAVPPSLTARNASPGGKKRKKRNSSTNEEVRVVDA
PDCLDMVTDQDQGFSSPGKRERRVSSSPANLERIEKK*
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